RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 SELENOTP62341 195 aa6.54□□□□□ -1.36
CTNNA1-221ENST00000520339 SPINK13Q1W4C9 94 aa6.54□□□□□ -1.36
CTNNA1-221ENST00000520339 DPPA3Q6W0C5 159 aa6.54□□□□□ -1.36
CTNNA1-221ENST00000520339 RNF182Q8N6D2 247 aa6.54□□□□□ -1.36
CTNNA1-221ENST00000520339 TMEM208Q9BTX3 173 aa6.54□□□□□ -1.36
CTNNA1-221ENST00000520339 NPCDR1Q9BY65 106 aa6.54□□□□□ -1.36
CTNNA1-221ENST00000520339 HIGD1AQ9Y241 93 aa6.54□□□□□ -1.36
CTNNA1-221ENST00000520339 WDR83OSQ9Y284 106 aa6.54□□□□□ -1.36
CTNNA1-221ENST00000520339 IGLV2-18A0A075B6J9 118 aa6.53□□□□□ -1.36
CTNNA1-221ENST00000520339 A0A087X0K7 114 aa6.53□□□□□ -1.36
CTNNA1-221ENST00000520339 XKRY2A2RUG3 117 aa6.53□□□□□ -1.36
CTNNA1-221ENST00000520339 TMEM238C9JI98 176 aa6.53□□□□□ -1.36
CTNNA1-221ENST00000520339 H0Y8G0 127 aa6.53□□□□□ -1.36
CTNNA1-221ENST00000520339 M0R2Z0 102 aa6.53□□□□□ -1.36
CTNNA1-221ENST00000520339 MRPS12O15235 138 aaKnown RBP6.53□□□□□ -1.36
CTNNA1-221ENST00000520339 INSP01308 110 aa6.53□□□□□ -1.36
CTNNA1-221ENST00000520339 LINC00869P0C866 280 aa6.53□□□□□ -1.36
CTNNA1-221ENST00000520339 STAG3L3P0CL85 134 aa6.53□□□□□ -1.36
CTNNA1-221ENST00000520339 DAD1P61803 113 aa6.53□□□□□ -1.36
CTNNA1-221ENST00000520339 SERF2P84101 59 aa6.53□□□□□ -1.36
CTNNA1-221ENST00000520339 RAB31Q13636 194 aa6.53□□□□□ -1.36
CTNNA1-221ENST00000520339 PYY3Q5JQD4 70 aa6.53□□□□□ -1.36
CTNNA1-221ENST00000520339 PATE2Q6UY27 113 aa6.53□□□□□ -1.36
CTNNA1-221ENST00000520339 ZNF738Q8NE65 137 aa6.53□□□□□ -1.36
CTNNA1-221ENST00000520339 OR8A1Q8NGG7 326 aa6.53□□□□□ -1.36
CTNNA1-221ENST00000520339 FAM213BQ8TBF2 198 aa6.53□□□□□ -1.36
CTNNA1-221ENST00000520339 NPVFQ9HCQ7 196 aa6.53□□□□□ -1.36
CTNNA1-221ENST00000520339 RYR1P21817 5038 aa6.53□□□□□ -1.36
CTNNA1-221ENST00000520339 PKHD1P08F94 4074 aa6.52□□□□□ -1.37
CTNNA1-221ENST00000520339 PCLOQ9Y6V0 5065 aa6.52□□□□□ -1.37
CTNNA1-221ENST00000520339 PLAC8L1A1L4L8 177 aa6.52□□□□□ -1.37
CTNNA1-221ENST00000520339 LYRM9A8MSI8 78 aa6.52□□□□□ -1.37
CTNNA1-221ENST00000520339 OR5G3P0C626 314 aa6.52□□□□□ -1.37
CTNNA1-221ENST00000520339 AZU1P20160 251 aa6.52□□□□□ -1.37
CTNNA1-221ENST00000520339 TSPOP30536 169 aa6.52□□□□□ -1.37
CTNNA1-221ENST00000520339 FHL2Q14192 279 aa6.52□□□□□ -1.37
CTNNA1-221ENST00000520339 PSG3Q16557 428 aa6.52□□□□□ -1.37
CTNNA1-221ENST00000520339 LCE4AQ5TA78 99 aa6.52□□□□□ -1.37
CTNNA1-221ENST00000520339 UBE2DNLQ8IWF7 75 aa6.52□□□□□ -1.37
CTNNA1-221ENST00000520339 UHRF2Q96PU4 802 aa6.52□□□□□ -1.37
CTNNA1-221ENST00000520339 KRTAP9-9Q9BYP9 154 aa6.52□□□□□ -1.37
CTNNA1-221ENST00000520339 KRTAP9-4Q9BYQ2 154 aa6.52□□□□□ -1.37
CTNNA1-221ENST00000520339 TRAV12-2A0A075B6T6 113 aa6.51□□□□□ -1.37
CTNNA1-221ENST00000520339 KRTAP9-7A8MTY7 169 aa6.51□□□□□ -1.37
CTNNA1-221ENST00000520339 HIST1H1AQ02539 215 aaPredicted RBP6.51□□□□□ -1.37
CTNNA1-221ENST00000520339 FFAR4Q5NUL3 377 aa6.51□□□□□ -1.37
CTNNA1-221ENST00000520339 S100A7AQ86SG5 101 aa6.51□□□□□ -1.37
CTNNA1-221ENST00000520339 C15orf53Q8NAA6 179 aa6.51□□□□□ -1.37
CTNNA1-221ENST00000520339 MGST2Q99735 147 aa6.51□□□□□ -1.37
CTNNA1-221ENST00000520339 RPH3ALQ9UNE2 315 aa6.51□□□□□ -1.37
CTNNA1-221ENST00000520339 KRTAP4-8A0A0G2JLE6 195 aa6.5□□□□□ -1.37
CTNNA1-221ENST00000520339 DEFB130BP0DP73 79 aa6.5□□□□□ -1.37
CTNNA1-221ENST00000520339 DEFB130AP0DP74 79 aa6.5□□□□□ -1.37
CTNNA1-221ENST00000520339 PRB4P10163 310 aaPredicted RBP6.5□□□□□ -1.37
CTNNA1-221ENST00000520339 RHOBP62745 196 aa6.5□□□□□ -1.37
CTNNA1-221ENST00000520339 ACOT6Q3I5F7 207 aaPredicted RBP6.5□□□□□ -1.37
CTNNA1-221ENST00000520339 CBLN2Q8IUK8 224 aa6.5□□□□□ -1.37
CTNNA1-221ENST00000520339 LYPD6BQ8NI32 183 aa6.5□□□□□ -1.37
CTNNA1-221ENST00000520339 HIST1H2BAQ96A08 127 aa6.5□□□□□ -1.37
CTNNA1-221ENST00000520339 RPUSD4Q96CM3 377 aaKnown RBP6.5□□□□□ -1.37
CTNNA1-221ENST00000520339 SMIM12Q96EX1 92 aa6.5□□□□□ -1.37
CTNNA1-221ENST00000520339 LINC01587Q99440 93 aa6.5□□□□□ -1.37
CTNNA1-221ENST00000520339 RNF24Q9Y225 148 aa6.5□□□□□ -1.37
CTNNA1-221ENST00000520339 PXMP4Q9Y6I8 212 aa6.5□□□□□ -1.37
CTNNA1-221ENST00000520339 LRP1BQ9NZR2 4599 aa6.49□□□□□ -1.37
CTNNA1-221ENST00000520339 CTXND1A0A1B0GTU2 59 aa6.49□□□□□ -1.37
CTNNA1-221ENST00000520339 SERTM2A0A1B0GWG4 89 aa6.49□□□□□ -1.37
CTNNA1-221ENST00000520339 F5H768 121 aa6.49□□□□□ -1.37
CTNNA1-221ENST00000520339 AGPAT2O15120 278 aa6.49□□□□□ -1.37
CTNNA1-221ENST00000520339 SCGB1A1P11684 91 aa6.49□□□□□ -1.37
CTNNA1-221ENST00000520339 LINC00305Q7Z4B0 112 aa6.49□□□□□ -1.37
CTNNA1-221ENST00000520339 TMEM256Q8N2U0 113 aa6.49□□□□□ -1.37
CTNNA1-221ENST00000520339 OR10G4Q8NGN3 311 aa6.49□□□□□ -1.37
CTNNA1-221ENST00000520339 OR10G9Q8NGN4 311 aa6.49□□□□□ -1.37
CTNNA1-221ENST00000520339 OR10G7Q8NGN6 311 aa6.49□□□□□ -1.37
CTNNA1-221ENST00000520339 TMEM37Q8WXS4 190 aa6.49□□□□□ -1.37
CTNNA1-221ENST00000520339 ACTR3CQ9C0K3 210 aaPredicted RBP6.49□□□□□ -1.37
CTNNA1-221ENST00000520339 ZNF331Q9NQX6 463 aaPredicted RBP6.49□□□□□ -1.37
CTNNA1-221ENST00000520339 PKD1P98161 4303 aa6.48□□□□□ -1.37
CTNNA1-221ENST00000520339 TRAV1-1A0A0B4J248 108 aa6.48□□□□□ -1.37
CTNNA1-221ENST00000520339 A0A1B0GV50 99 aa6.48□□□□□ -1.37
CTNNA1-221ENST00000520339 MAP1LC3B2A6NCE7 125 aa6.48□□□□□ -1.37
CTNNA1-221ENST00000520339 PRAC2D3DTV9 90 aa6.48□□□□□ -1.37
CTNNA1-221ENST00000520339 SNRPCP09234 159 aaKnown RBP6.48□□□□□ -1.37
CTNNA1-221ENST00000520339 NBEAP1P0C6P0 100 aa6.48□□□□□ -1.37
CTNNA1-221ENST00000520339 RPL29P47914 159 aaKnown RBP6.48□□□□□ -1.37
CTNNA1-221ENST00000520339 CDC34P49427 236 aaPredicted RBP6.48□□□□□ -1.37
CTNNA1-221ENST00000520339 PPT1P50897 306 aa6.48□□□□□ -1.37
CTNNA1-221ENST00000520339 SOHLH1Q5JUK2 328 aa6.48□□□□□ -1.37
CTNNA1-221ENST00000520339 C1orf134Q5TEV5 83 aa6.48□□□□□ -1.37
CTNNA1-221ENST00000520339 MORN5Q5VZ52 161 aa6.48□□□□□ -1.37
CTNNA1-221ENST00000520339 MIC13Q5XKP0 118 aa6.48□□□□□ -1.37
CTNNA1-221ENST00000520339 LCN15Q6UWW0 184 aa6.48□□□□□ -1.37
CTNNA1-221ENST00000520339 ZFP82Q8N141 532 aa6.48□□□□□ -1.37
CTNNA1-221ENST00000520339 ZNRF2Q8NHG8 242 aa6.48□□□□□ -1.37
CTNNA1-221ENST00000520339 MAP1LC3BQ9GZQ8 125 aa6.48□□□□□ -1.37
CTNNA1-221ENST00000520339 SLC39A9Q9NUM3 307 aa6.48□□□□□ -1.37
CTNNA1-221ENST00000520339 TIMM8BQ9Y5J9 83 aaPredicted RBP6.48□□□□□ -1.37
CTNNA1-221ENST00000520339 H3BQ15 152 aa6.47□□□□□ -1.37
CTNNA1-221ENST00000520339 H7BYZ3 331 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms