RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 K7ERJ3 54 aa-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 CDC42EP2O14613 210 aa-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 TAX1BP3O14907 124 aa-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 DEGS1O15121 323 aa-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 NCR2O95944 276 aa-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 CSTAP01040 98 aa-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 IFNA21P01568 189 aa-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 C8GP07360 202 aa-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 FABP4P15090 132 aa-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 HIST1H1TP22492 207 aaPredicted RBP-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 RPS12P25398 132 aaKnown RBP-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 ERP29P30040 261 aaKnown RBP-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 POLR2JP52435 117 aaKnown RBP-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 TMBIM6P55061 237 aa-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 HADHBP55084 474 aaKnown RBP-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 DNAJB13P59910 316 aa-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 SPCS3P61009 180 aa-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 IZUMO2Q6UXV1 221 aa-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 DEFB132Q7Z7B7 95 aa-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 TRAPPC5Q8IUR0 188 aa-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 OR6V1Q8N148 313 aa-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 C4orf33Q8N1A6 199 aa-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 TMEM229BQ8NBD8 167 aa-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 NEK7Q8TDX7 302 aa-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 CT55Q8WUE5 264 aa-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 BRK1Q8WUW1 75 aa-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 MAFIPQ8WZ33 124 aa-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 PPP1R2P1Q96PQ5 205 aa-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 SMIM7Q9BQ49 75 aa-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 VPS25Q9BRG1 176 aa-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 PBDC1Q9BVG4 233 aa-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 OR2H1Q9GZK4 316 aa-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 CACYBPQ9HB71 228 aaKnown RBP-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 FGFR1OP2Q9NVK5 253 aa-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 SCN3BQ9NY72 215 aa-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 V9GYV3 84 aa-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 PKHD1P08F94 4074 aa-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 CPDO75976 1380 aa-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 ROBO3Q96MS0 1386 aa-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 HYDINQ4G0P3 5121 aa-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 KIAA1107Q9UPP5 1409 aa-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 MYH4Q9Y623 1939 aa-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 ARAP1Q96P48 1450 aa-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 DLC1Q96QB1 1528 aa-0.48□□□□□ -2.49
RNU4-49P-201ENST00000516080 PCF11O94913 1555 aaKnown RBP-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 KIAA0556O60303 1618 aa-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 LRRC37A3O60309 1634 aa-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 NBPF19A0A087WUL8 3843 aa-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 QRICH2Q9H0J4 1663 aa-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 MARF1Q9Y4F3 1742 aaKnown RBP-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 hADV38S2A0JD32 116 aa-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 TMEM189A5PLL7 270 aa-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 M0R036 132 aa-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 HIST1H2BKO60814 126 aa-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 IFNA7P01567 189 aa-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 TRACP01848 142 aa-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 APOA1P02647 267 aa-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 HIST1H2BJP06899 126 aa-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 OCM2P0CE71 109 aa-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 SPRR1BP22528 89 aa-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 NFYBP25208 207 aa-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 ARPP19P56211 112 aa-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 CARD18P57730 90 aa-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 ELOF1P60002 83 aaKnown RBP-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 MYL6P60660 151 aa-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 EMX2Q04743 252 aa-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 RHOHQ15669 191 aa-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 ALX1Q15699 326 aa-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 RRN3P1Q2M238 152 aa-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 Q6Q795 121 aa-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 FAM151BQ6UXP7 276 aa-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 COPS6Q7L5N1 327 aa-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 FAM216BQ8N7L0 139 aa-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 OR5A2Q8NGI9 324 aa-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 OR10X1Q8NGY0 326 aa-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 STAG3L4Q8TBR4 150 aa-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 SLC35B4Q969S0 331 aa-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 DGCR14Q96DF8 476 aaKnown RBP-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 SPRR2FQ96RM1 72 aa-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 LYSTQ99698 3801 aa-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 C20orf27Q9GZN8 174 aa-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 AGPAT4-IT1Q9H0P7 198 aa-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 GLTPQ9NZD2 209 aa-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 CHMP5Q9NZZ3 219 aa-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 VPS29Q9UBQ0 182 aa-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 ITPR3Q14573 2671 aa-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 ABCC11Q96J66 1382 aa-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 WRNQ14191 1432 aaPredicted RBP eCLIP-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 FAM135BQ49AJ0 1406 aa-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 SLIT1O75093 1534 aa-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 EPPK1P58107 5090 aaKnown RBP-0.49□□□□□ -2.49
RNU4-49P-201ENST00000516080 C4AP0C0L4 1744 aa-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 C4BP0C0L5 1744 aa-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 KIAA1551Q9HCM1 1747 aa-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 ATRQ13535 2644 aa-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 UBR3Q6ZT12 1888 aa-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 PRRC2CQ9Y520 2896 aaKnown RBP-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 VPS13BQ7Z7G8 4022 aa-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 DNAH6Q9C0G6 4158 aa-0.5□□□□□ -2.49
RNU4-49P-201ENST00000516080 LOC107986453A0A1B0GWG9 222 aa-0.5□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 218.2 ms