RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 IFITM5A6NNB3 132 aa2.05□□□□□ -2.08
CHD1-205ENST00000508756 MPV17LQ2QL34 196 aa2.05□□□□□ -2.08
CHD1-205ENST00000508756 SNURFQ9Y675 71 aa2.05□□□□□ -2.08
CHD1-205ENST00000508756 ANK1P16157 1881 aa2.05□□□□□ -2.08
CHD1-205ENST00000508756 NUPR1O60356 82 aa2.04□□□□□ -2.08
CHD1-205ENST00000508756 PYYP10082 97 aa2.04□□□□□ -2.08
CHD1-205ENST00000508756 ADCYAP1P18509 176 aa2.04□□□□□ -2.08
CHD1-205ENST00000508756 FOCADQ5VW36 1801 aa2.04□□□□□ -2.08
CHD1-205ENST00000508756 C3orf62Q6ZUJ4 267 aa2.04□□□□□ -2.08
CHD1-205ENST00000508756 Q6ZUT4 128 aa2.04□□□□□ -2.08
CHD1-205ENST00000508756 ALPK3Q96L96 1907 aa2.04□□□□□ -2.08
CHD1-205ENST00000508756 OBSCN-AS1Q96MR7 158 aa2.04□□□□□ -2.08
CHD1-205ENST00000508756 C2orf88Q9BSF0 95 aa2.04□□□□□ -2.08
CHD1-205ENST00000508756 MYH7P12883 1935 aa2.03□□□□□ -2.08
CHD1-205ENST00000508756 TNRC6BQ9UPQ9 1833 aaKnown RBP2.03□□□□□ -2.08
CHD1-205ENST00000508756 A0A1W2PRS3 328 aa2.03□□□□□ -2.08
CHD1-205ENST00000508756 M0R2P5 195 aa2.03□□□□□ -2.08
CHD1-205ENST00000508756 HIST1H1DP16402 221 aaKnown RBP2.03□□□□□ -2.08
CHD1-205ENST00000508756 GUCA1AP43080 201 aaPredicted RBP2.03□□□□□ -2.08
CHD1-205ENST00000508756 CCSMST1Q4G0I0 132 aa2.03□□□□□ -2.08
CHD1-205ENST00000508756 IDO2Q6ZQW0 420 aa2.03□□□□□ -2.08
CHD1-205ENST00000508756 Q6ZSA8 131 aa2.03□□□□□ -2.08
CHD1-205ENST00000508756 SLC25A26Q70HW3 274 aa2.03□□□□□ -2.08
CHD1-205ENST00000508756 TCTEX1D1Q8N7M0 179 aa2.03□□□□□ -2.08
CHD1-205ENST00000508756 C1orf54Q8WWF1 131 aa2.03□□□□□ -2.08
CHD1-205ENST00000508756 DPH3Q96FX2 82 aa2.03□□□□□ -2.08
CHD1-205ENST00000508756 PSMG3Q9BT73 122 aaPredicted RBP2.03□□□□□ -2.08
CHD1-205ENST00000508756 NINQ8N4C6 2090 aa2.03□□□□□ -2.08
CHD1-205ENST00000508756 SIP14410 1827 aa2.03□□□□□ -2.09
CHD1-205ENST00000508756 TRBV6-7A0A0A0MS04 114 aa2.02□□□□□ -2.09
CHD1-205ENST00000508756 SPAARA0A1B0GVQ0 90 aa2.02□□□□□ -2.09
CHD1-205ENST00000508756 IL9P15248 144 aa2.02□□□□□ -2.09
CHD1-205ENST00000508756 ASB16-AS1Q495Z4 193 aa2.02□□□□□ -2.09
CHD1-205ENST00000508756 MEIG1Q5JSS6 88 aa2.02□□□□□ -2.09
CHD1-205ENST00000508756 TMEM191AQ9H0A3 160 aa2.02□□□□□ -2.09
CHD1-205ENST00000508756 TMEM14CQ9P0S9 112 aa2.02□□□□□ -2.09
CHD1-205ENST00000508756 HELZ2Q9BYK8 2649 aaKnown RBP2.02□□□□□ -2.09
CHD1-205ENST00000508756 JMJD7-PLA2G4BH0Y9G9 81 aa2.01□□□□□ -2.09
CHD1-205ENST00000508756 IGHV3-33P01772 117 aa2.01□□□□□ -2.09
CHD1-205ENST00000508756 ATP11AUNQ6ZP68 121 aa2.01□□□□□ -2.09
CHD1-205ENST00000508756 KCNRGQ8N5I3 272 aa2.01□□□□□ -2.09
CHD1-205ENST00000508756 ATP6V0E2Q8NHE4 81 aa2.01□□□□□ -2.09
CHD1-205ENST00000508756 PDCD10Q9BUL8 212 aa2.01□□□□□ -2.09
CHD1-205ENST00000508756 KIAA1549LQ6ZVL6 1849 aa2.01□□□□□ -2.09
CHD1-205ENST00000508756 LRP5O75197 1615 aa2□□□□□ -2.09
CHD1-205ENST00000508756 PTPRDP23468 1912 aa2□□□□□ -2.09
CHD1-205ENST00000508756 IGKV3D-7A0A0C4DH55 119 aa2□□□□□ -2.09
CHD1-205ENST00000508756 IGKV3OR2-268A0A0C4DH90 116 aa2□□□□□ -2.09
CHD1-205ENST00000508756 CCDC179H3BU77 68 aa2□□□□□ -2.09
CHD1-205ENST00000508756 J3QLW9 94 aa2□□□□□ -2.09
CHD1-205ENST00000508756 INE1O15225 51 aa2□□□□□ -2.09
CHD1-205ENST00000508756 IGLV3-1P01715 115 aa2□□□□□ -2.09
CHD1-205ENST00000508756 SPCS2Q15005 226 aa2□□□□□ -2.09
CHD1-205ENST00000508756 UNQ6190/PRO20217Q6UXQ8 127 aa2□□□□□ -2.09
CHD1-205ENST00000508756 SEC11CQ9BY50 192 aa2□□□□□ -2.09
CHD1-205ENST00000508756 MED9Q9NWA0 146 aa2□□□□□ -2.09
CHD1-205ENST00000508756 MYO18AQ92614 2054 aaKnown RBP2□□□□□ -2.09
CHD1-205ENST00000508756 CASZ1Q86V15 1759 aa2□□□□□ -2.09
CHD1-205ENST00000508756 KIDINS220Q9ULH0 1771 aa2□□□□□ -2.09
CHD1-205ENST00000508756 MCM3APO60318 1980 aa1.99□□□□□ -2.09
CHD1-205ENST00000508756 LOC110117498A0A087WWA1 95 aa1.99□□□□□ -2.09
CHD1-205ENST00000508756 GEMIN2O14893 280 aaKnown RBP1.99□□□□□ -2.09
CHD1-205ENST00000508756 APOC1P02654 83 aa1.99□□□□□ -2.09
CHD1-205ENST00000508756 LINC00322Q6ZN03 302 aaPredicted RBP1.99□□□□□ -2.09
CHD1-205ENST00000508756 SAR1AQ9NR31 198 aa1.99□□□□□ -2.09
CHD1-205ENST00000508756 TAS2R8Q9NYW2 309 aa1.99□□□□□ -2.09
CHD1-205ENST00000508756 GRIN2AQ12879 1464 aa1.99□□□□□ -2.09
CHD1-205ENST00000508756 WDR97A6NE52 1622 aa1.99□□□□□ -2.09
CHD1-205ENST00000508756 TMEM30CPA0ZSE6 113 aa1.98□□□□□ -2.09
CHD1-205ENST00000508756 FAM92AA1XBS5 289 aa1.98□□□□□ -2.09
CHD1-205ENST00000508756 YPEL1O60688 119 aa1.98□□□□□ -2.09
CHD1-205ENST00000508756 POLR2JP52435 117 aaKnown RBP1.98□□□□□ -2.09
CHD1-205ENST00000508756 RHOHQ15669 191 aa1.98□□□□□ -2.09
CHD1-205ENST00000508756 UNQ5815/PRO19632Q6UWF5 114 aa1.98□□□□□ -2.09
CHD1-205ENST00000508756 LYPD5Q6UWN5 251 aa1.98□□□□□ -2.09
CHD1-205ENST00000508756 ATOH7Q8N100 152 aa1.98□□□□□ -2.09
CHD1-205ENST00000508756 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.98□□□□□ -2.09
CHD1-205ENST00000508756 DYNLRB2Q8TF09 96 aa1.98□□□□□ -2.09
CHD1-205ENST00000508756 GNG8Q9UK08 70 aa1.98□□□□□ -2.09
CHD1-205ENST00000508756 M0R2N4 97 aa1.97□□□□□ -2.09
CHD1-205ENST00000508756 ARL14EPLP0DKL9 152 aa1.97□□□□□ -2.09
CHD1-205ENST00000508756 SLC25A6P12236 298 aa1.97□□□□□ -2.09
CHD1-205ENST00000508756 OCIAD2Q56VL3 154 aa1.97□□□□□ -2.09
CHD1-205ENST00000508756 SCN3BQ9NY72 215 aa1.97□□□□□ -2.09
CHD1-205ENST00000508756 CCDC167Q9P0B6 97 aa1.97□□□□□ -2.09
CHD1-205ENST00000508756 MRPL36Q9P0J6 103 aaKnown RBP1.97□□□□□ -2.09
CHD1-205ENST00000508756 MED13Q9UHV7 2174 aa1.97□□□□□ -2.09
CHD1-205ENST00000508756 MBD5Q9P267 1494 aa1.96□□□□□ -2.1
CHD1-205ENST00000508756 IGKV3-7A0A075B6H7 116 aa1.96□□□□□ -2.1
CHD1-205ENST00000508756 PIRTP0C851 137 aa1.96□□□□□ -2.1
CHD1-205ENST00000508756 S100A7L2Q5SY68 101 aa1.96□□□□□ -2.1
CHD1-205ENST00000508756 GDF5OSQ5U4N7 250 aa1.96□□□□□ -2.1
CHD1-205ENST00000508756 LINC01545Q5VT33 79 aa1.96□□□□□ -2.1
CHD1-205ENST00000508756 CGREF1Q99674 301 aa1.96□□□□□ -2.1
CHD1-205ENST00000508756 ERBINQ96RT1 1412 aa1.96□□□□□ -2.1
CHD1-205ENST00000508756 COL4A1P02462 1669 aa1.96□□□□□ -2.1
CHD1-205ENST00000508756 HMCN1Q96RW7 5635 aa1.96□□□□□ -2.1
CHD1-205ENST00000508756 KMT2BQ9UMN6 2715 aaPredicted RBP1.96□□□□□ -2.1
CHD1-205ENST00000508756 TRAV12-2A0A075B6T6 113 aa1.95□□□□□ -2.1
CHD1-205ENST00000508756 F6UZH7 168 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms