RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 LOXL1Q08397 574 aaPredicted RBP8.45□□□□□ -1.06
SH3RF1-203ENST00000508685 DEFB112Q30KQ8 113 aa8.45□□□□□ -1.06
SH3RF1-203ENST00000508685 FAM106AQ4KMX7 169 aa8.45□□□□□ -1.06
SH3RF1-203ENST00000508685 GTF2H5Q6ZYL4 71 aa8.45□□□□□ -1.06
SH3RF1-203ENST00000508685 SMIM15Q7Z3B0 74 aa8.45□□□□□ -1.06
SH3RF1-203ENST00000508685 BEX4Q9NWD9 120 aaPredicted RBP8.45□□□□□ -1.06
SH3RF1-203ENST00000508685 AKAP9Q99996 3911 aa8.45□□□□□ -1.06
SH3RF1-203ENST00000508685 CBY3A6NI87 242 aa8.44□□□□□ -1.06
SH3RF1-203ENST00000508685 IGHV4-59P01825 116 aa8.44□□□□□ -1.06
SH3RF1-203ENST00000508685 IGF1P05019 195 aa8.44□□□□□ -1.06
SH3RF1-203ENST00000508685 PCP4P48539 62 aa8.44□□□□□ -1.06
SH3RF1-203ENST00000508685 ZNF80P51504 273 aaPredicted RBP8.44□□□□□ -1.06
SH3RF1-203ENST00000508685 ANKRD39Q53RE8 183 aa8.44□□□□□ -1.06
SH3RF1-203ENST00000508685 AMMECR1LQ6DCA0 310 aa8.44□□□□□ -1.06
SH3RF1-203ENST00000508685 Q96MF0 132 aa8.44□□□□□ -1.06
SH3RF1-203ENST00000508685 TRBV7-1A0A0A6YYK4 115 aa8.44□□□□□ -1.06
SH3RF1-203ENST00000508685 PRSS47A8MTI9 375 aa8.44□□□□□ -1.06
SH3RF1-203ENST00000508685 IGHG2P01859 326 aa8.44□□□□□ -1.06
SH3RF1-203ENST00000508685 CRIP2P52943 208 aaPredicted RBP8.44□□□□□ -1.06
SH3RF1-203ENST00000508685 KRTAP1-3Q8IUG1 177 aa8.44□□□□□ -1.06
SH3RF1-203ENST00000508685 EEF1AKMT3Q96AZ1 226 aa8.44□□□□□ -1.06
SH3RF1-203ENST00000508685 RNF185Q96GF1 192 aa8.44□□□□□ -1.06
SH3RF1-203ENST00000508685 ZFAND3Q9H8U3 227 aa8.44□□□□□ -1.06
SH3RF1-203ENST00000508685 ATP5LO75964 103 aa8.43□□□□□ -1.06
SH3RF1-203ENST00000508685 TRGV3P03979 118 aa8.43□□□□□ -1.06
SH3RF1-203ENST00000508685 Q8TAT8 98 aa8.43□□□□□ -1.06
SH3RF1-203ENST00000508685 C9orf118A6NHY6 69 aa8.42□□□□□ -1.06
SH3RF1-203ENST00000508685 J3QLI3 93 aa8.42□□□□□ -1.06
SH3RF1-203ENST00000508685 TNFRSF6BO95407 300 aa8.42□□□□□ -1.06
SH3RF1-203ENST00000508685 PPIFP30405 207 aaKnown RBP8.42□□□□□ -1.06
SH3RF1-203ENST00000508685 ATP5G2Q06055 141 aa8.42□□□□□ -1.06
SH3RF1-203ENST00000508685 TMEM95Q3KNT9 176 aa8.42□□□□□ -1.06
SH3RF1-203ENST00000508685 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.42□□□□□ -1.06
SH3RF1-203ENST00000508685 LCNL1Q6ZST4 164 aa8.42□□□□□ -1.06
SH3RF1-203ENST00000508685 LRRC75A-AS1Q8N1F1 130 aa8.42□□□□□ -1.06
SH3RF1-203ENST00000508685 Q8N8P6 123 aa8.42□□□□□ -1.06
SH3RF1-203ENST00000508685 METTL26Q96S19 204 aa8.42□□□□□ -1.06
SH3RF1-203ENST00000508685 FOXC2Q99958 501 aa8.42□□□□□ -1.06
SH3RF1-203ENST00000508685 CST9LQ9H4G1 147 aa8.42□□□□□ -1.06
SH3RF1-203ENST00000508685 ZMAT4Q9H898 229 aa8.42□□□□□ -1.06
SH3RF1-203ENST00000508685 HIGD1BQ9P298 99 aa8.42□□□□□ -1.06
SH3RF1-203ENST00000508685 TP73-AS1Q9UF72 201 aa8.42□□□□□ -1.06
SH3RF1-203ENST00000508685 PRRC2AP48634 2157 aaKnown RBP8.42□□□□□ -1.06
SH3RF1-203ENST00000508685 SONP18583 2426 aaKnown RBP8.42□□□□□ -1.06
SH3RF1-203ENST00000508685 IGHV3OR16-13A0A075B7E8 117 aa8.42□□□□□ -1.06
SH3RF1-203ENST00000508685 IGHV3-74A0A0B4J1X5 117 aa8.42□□□□□ -1.06
SH3RF1-203ENST00000508685 IGHV3-66A0A0C4DH42 116 aa8.42□□□□□ -1.06
SH3RF1-203ENST00000508685 CLPSL1A2RUU4 121 aa8.42□□□□□ -1.06
SH3RF1-203ENST00000508685 GAGE10A6NGK3 116 aa8.42□□□□□ -1.06
SH3RF1-203ENST00000508685 HLA-DRB4P13762 266 aa8.42□□□□□ -1.06
SH3RF1-203ENST00000508685 LEPP41159 167 aa8.42□□□□□ -1.06
SH3RF1-203ENST00000508685 TMEM78Q5T7P6 136 aa8.42□□□□□ -1.06
SH3RF1-203ENST00000508685 PRSS57Q6UWY2 283 aa8.42□□□□□ -1.06
SH3RF1-203ENST00000508685 ZNF575Q86XF7 245 aa8.42□□□□□ -1.06
SH3RF1-203ENST00000508685 KLK15Q9H2R5 256 aa8.42□□□□□ -1.06
SH3RF1-203ENST00000508685 LENEPQ9Y5L5 61 aa8.42□□□□□ -1.06
SH3RF1-203ENST00000508685 HLA-DRB4X5D2U9 266 aa8.42□□□□□ -1.06
SH3RF1-203ENST00000508685 IGHV4-4A0A075B6R2 117 aa8.41□□□□□ -1.06
SH3RF1-203ENST00000508685 FAM223BA6NKX1 122 aa8.41□□□□□ -1.06
SH3RF1-203ENST00000508685 K7ERU9 68 aa8.41□□□□□ -1.06
SH3RF1-203ENST00000508685 ZNF207O43670 478 aaKnown RBP8.41□□□□□ -1.06
SH3RF1-203ENST00000508685 TRBV12-3P01733 135 aa8.41□□□□□ -1.06
SH3RF1-203ENST00000508685 C9orf47Q6ZRZ4 202 aa8.41□□□□□ -1.06
SH3RF1-203ENST00000508685 FAM223AQ8IWN6 122 aa8.41□□□□□ -1.06
SH3RF1-203ENST00000508685 NF1P21359 2839 aa8.41□□□□□ -1.06
SH3RF1-203ENST00000508685 IGHV3-49A0A0A0MS15 119 aa8.41□□□□□ -1.06
SH3RF1-203ENST00000508685 GAGE12BA1L429 117 aa8.41□□□□□ -1.06
SH3RF1-203ENST00000508685 SMKR1H3BMG3 65 aa8.41□□□□□ -1.06
SH3RF1-203ENST00000508685 EVI2AP22794 236 aa8.41□□□□□ -1.06
SH3RF1-203ENST00000508685 OCIAD2Q56VL3 154 aa8.41□□□□□ -1.06
SH3RF1-203ENST00000508685 IGFL4Q6B9Z1 124 aa8.41□□□□□ -1.06
SH3RF1-203ENST00000508685 ADAMTSL5Q6ZMM2 481 aa8.41□□□□□ -1.06
SH3RF1-203ENST00000508685 U3KQE9 123 aa8.41□□□□□ -1.06
SH3RF1-203ENST00000508685 TRAV8-6A0A0B4J262 113 aa8.4□□□□□ -1.06
SH3RF1-203ENST00000508685 FSHBP01225 129 aa8.4□□□□□ -1.06
SH3RF1-203ENST00000508685 IGHV3-11P01762 117 aa8.4□□□□□ -1.06
SH3RF1-203ENST00000508685 HLA-DMBP28068 263 aa8.4□□□□□ -1.06
SH3RF1-203ENST00000508685 KIR3DS1Q14943 382 aa8.4□□□□□ -1.06
SH3RF1-203ENST00000508685 AGPAT4-IT1Q9H0P7 198 aa8.4□□□□□ -1.06
SH3RF1-203ENST00000508685 SNAI2O43623 268 aa8.39□□□□□ -1.07
SH3RF1-203ENST00000508685 IGKCP01834 107 aa8.39□□□□□ -1.07
SH3RF1-203ENST00000508685 PRSS1P07477 247 aa8.39□□□□□ -1.07
SH3RF1-203ENST00000508685 PF4V1P10720 104 aa8.39□□□□□ -1.07
SH3RF1-203ENST00000508685 ERCC8Q13216 396 aa8.39□□□□□ -1.07
SH3RF1-203ENST00000508685 IL17RELQ6ZVW7 336 aa8.39□□□□□ -1.07
SH3RF1-203ENST00000508685 WFDC11Q8NEX6 87 aa8.39□□□□□ -1.07
SH3RF1-203ENST00000508685 OR2K2Q8NGT1 345 aa8.39□□□□□ -1.07
SH3RF1-203ENST00000508685 MYOZ3Q8TDC0 251 aa8.39□□□□□ -1.07
SH3RF1-203ENST00000508685 HIVEP1P15822 2718 aa8.39□□□□□ -1.07
SH3RF1-203ENST00000508685 IGKV3D-20A0A0C4DH25 116 aa8.39□□□□□ -1.07
SH3RF1-203ENST00000508685 PRAC2D3DTV9 90 aa8.39□□□□□ -1.07
SH3RF1-203ENST00000508685 ARL3P36405 182 aa8.39□□□□□ -1.07
SH3RF1-203ENST00000508685 ODF1Q14990 250 aa8.39□□□□□ -1.07
SH3RF1-203ENST00000508685 OR5A1Q8NGJ0 315 aa8.39□□□□□ -1.07
SH3RF1-203ENST00000508685 MSRB1Q9NZV6 116 aa8.39□□□□□ -1.07
SH3RF1-203ENST00000508685 K7EMI3 77 aa8.38□□□□□ -1.07
SH3RF1-203ENST00000508685 DPM2O94777 84 aa8.38□□□□□ -1.07
SH3RF1-203ENST00000508685 IGLV1-40P01703 118 aa8.38□□□□□ -1.07
SH3RF1-203ENST00000508685 NMUP48645 174 aa8.38□□□□□ -1.07
SH3RF1-203ENST00000508685 CFHR3Q02985 330 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms