RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 TSPEAR-AS2P59090 65 aa5.61□□□□□ -1.51
LIMCH1-207ENST00000508466 FAM19A5Q7Z5A7 132 aaPredicted RBP5.61□□□□□ -1.51
LIMCH1-207ENST00000508466 C10orf126Q8N4M7 172 aa5.61□□□□□ -1.51
LIMCH1-207ENST00000508466 CLEC2BQ92478 149 aa5.61□□□□□ -1.51
LIMCH1-207ENST00000508466 U3KQK5 164 aa5.61□□□□□ -1.51
LIMCH1-207ENST00000508466 M0R1B8 84 aa5.61□□□□□ -1.51
LIMCH1-207ENST00000508466 CDX4O14627 284 aaPredicted RBP5.61□□□□□ -1.51
LIMCH1-207ENST00000508466 TM4SF5O14894 197 aa5.61□□□□□ -1.51
LIMCH1-207ENST00000508466 EIF4EBP3O60516 100 aaPredicted RBP5.61□□□□□ -1.51
LIMCH1-207ENST00000508466 FCN3O75636 299 aa5.61□□□□□ -1.51
LIMCH1-207ENST00000508466 ASIPP42127 132 aa5.61□□□□□ -1.51
LIMCH1-207ENST00000508466 LAGE3Q14657 143 aa5.61□□□□□ -1.51
LIMCH1-207ENST00000508466 CRYBG3Q68DQ2 2970 aa5.61□□□□□ -1.51
LIMCH1-207ENST00000508466 KIR2DL5BQ8NHK3 375 aa5.61□□□□□ -1.51
LIMCH1-207ENST00000508466 CFHR4Q92496 578 aa5.61□□□□□ -1.51
LIMCH1-207ENST00000508466 C11orf21Q9P2W6 132 aa5.61□□□□□ -1.51
LIMCH1-207ENST00000508466 IGKV3-7A0A075B6H7 116 aa5.61□□□□□ -1.51
LIMCH1-207ENST00000508466 A0A0U1RRA0 63 aa5.61□□□□□ -1.51
LIMCH1-207ENST00000508466 IGKV1-17P01599 117 aa5.61□□□□□ -1.51
LIMCH1-207ENST00000508466 IGF1P05019 195 aa5.61□□□□□ -1.51
LIMCH1-207ENST00000508466 MGPP08493 103 aa5.61□□□□□ -1.51
LIMCH1-207ENST00000508466 RPL39P62891 51 aaKnown RBP5.61□□□□□ -1.51
LIMCH1-207ENST00000508466 C9orf153Q5TBE3 101 aa5.61□□□□□ -1.51
LIMCH1-207ENST00000508466 CYSTM1Q9H1C7 97 aa5.61□□□□□ -1.51
LIMCH1-207ENST00000508466 VPS13CQ709C8 3753 aa5.6□□□□□ -1.51
LIMCH1-207ENST00000508466 LY6G6EA0A0G2JKS1 128 aa5.6□□□□□ -1.51
LIMCH1-207ENST00000508466 INS-IGF2F8WCM5 200 aa5.6□□□□□ -1.51
LIMCH1-207ENST00000508466 HERVK_113P61574 105 aa5.6□□□□□ -1.51
LIMCH1-207ENST00000508466 LCE2DQ5TA82 110 aaPredicted RBP5.6□□□□□ -1.51
LIMCH1-207ENST00000508466 SPRR3Q9UBC9 169 aa5.6□□□□□ -1.51
LIMCH1-207ENST00000508466 LINC00527Q9UJ94 153 aa5.6□□□□□ -1.51
LIMCH1-207ENST00000508466 U3KQA8 63 aa5.6□□□□□ -1.51
LIMCH1-207ENST00000508466 RBAKDNA6NC62 111 aa5.6□□□□□ -1.51
LIMCH1-207ENST00000508466 SRRM5B3KS81 715 aa5.6□□□□□ -1.51
LIMCH1-207ENST00000508466 C5orf67F2Z3F1 127 aa5.6□□□□□ -1.51
LIMCH1-207ENST00000508466 ATP5LO75964 103 aa5.6□□□□□ -1.51
LIMCH1-207ENST00000508466 COX7A1P24310 79 aa5.6□□□□□ -1.51
LIMCH1-207ENST00000508466 UBE2D3P61077 147 aa5.6□□□□□ -1.51
LIMCH1-207ENST00000508466 UBE2D2P62837 147 aa5.6□□□□□ -1.51
LIMCH1-207ENST00000508466 PMVKQ15126 192 aa5.6□□□□□ -1.51
LIMCH1-207ENST00000508466 SPANXN1Q5VSR9 72 aa5.6□□□□□ -1.51
LIMCH1-207ENST00000508466 PRR7Q8TB68 274 aa5.6□□□□□ -1.51
LIMCH1-207ENST00000508466 LINC01587Q99440 93 aa5.6□□□□□ -1.51
LIMCH1-207ENST00000508466 ACACAQ13085 2346 aa5.6□□□□□ -1.51
LIMCH1-207ENST00000508466 NTN3O00634 580 aaPredicted RBP5.59□□□□□ -1.51
LIMCH1-207ENST00000508466 CGB3P0DN86 165 aa5.59□□□□□ -1.51
LIMCH1-207ENST00000508466 CGB7P0DN87 165 aa5.59□□□□□ -1.51
LIMCH1-207ENST00000508466 C4orf26Q17RF5 130 aa5.59□□□□□ -1.51
LIMCH1-207ENST00000508466 OR4C13Q8NGP0 309 aa5.59□□□□□ -1.51
LIMCH1-207ENST00000508466 CCL17Q92583 94 aa5.59□□□□□ -1.51
LIMCH1-207ENST00000508466 DUX5Q96PT3 197 aa5.59□□□□□ -1.51
LIMCH1-207ENST00000508466 C11orf86A6NJI1 115 aa5.59□□□□□ -1.51
LIMCH1-207ENST00000508466 F8VRH5 84 aa5.59□□□□□ -1.51
LIMCH1-207ENST00000508466 DUSP14O95147 198 aaKnown RBP5.59□□□□□ -1.51
LIMCH1-207ENST00000508466 RPL27AP46776 148 aaKnown RBP5.59□□□□□ -1.51
LIMCH1-207ENST00000508466 HERVK_113P63121 156 aa5.59□□□□□ -1.51
LIMCH1-207ENST00000508466 DYNAPQ8N1N2 210 aa5.59□□□□□ -1.51
LIMCH1-207ENST00000508466 DAND5Q8N907 189 aa5.59□□□□□ -1.51
LIMCH1-207ENST00000508466 THAP8Q8NA92 274 aa5.59□□□□□ -1.51
LIMCH1-207ENST00000508466 ATP6V0E2Q8NHE4 81 aa5.59□□□□□ -1.51
LIMCH1-207ENST00000508466 PRO1854Q9UHT4 67 aa5.59□□□□□ -1.51
LIMCH1-207ENST00000508466 CENPVL3A0A0U1RRI6 287 aa5.59□□□□□ -1.52
LIMCH1-207ENST00000508466 A8MZ25 164 aa5.59□□□□□ -1.52
LIMCH1-207ENST00000508466 IGFBP4P22692 258 aa5.59□□□□□ -1.52
LIMCH1-207ENST00000508466 UBE2D1P51668 147 aa5.59□□□□□ -1.52
LIMCH1-207ENST00000508466 LYPD2Q6UXB3 125 aa5.59□□□□□ -1.52
LIMCH1-207ENST00000508466 C22orf34Q6ZV56 151 aa5.59□□□□□ -1.52
LIMCH1-207ENST00000508466 NXT2Q9NPJ8 142 aaKnown RBP5.59□□□□□ -1.52
LIMCH1-207ENST00000508466 TRAV8-3A0A0A6YYJ7 113 aa5.58□□□□□ -1.52
LIMCH1-207ENST00000508466 IGLV2-23P01705 113 aa5.58□□□□□ -1.52
LIMCH1-207ENST00000508466 ZNF883P0CG24 379 aa5.58□□□□□ -1.52
LIMCH1-207ENST00000508466 NDPQ00604 133 aa5.58□□□□□ -1.52
LIMCH1-207ENST00000508466 C2orf82Q6UX34 121 aa5.58□□□□□ -1.52
LIMCH1-207ENST00000508466 HRCT1Q6UXD1 115 aa5.58□□□□□ -1.52
LIMCH1-207ENST00000508466 TDHQ8IZJ6 230 aa5.58□□□□□ -1.52
LIMCH1-207ENST00000508466 Q8N8P6 123 aa5.58□□□□□ -1.52
LIMCH1-207ENST00000508466 GATD1Q8NB37 220 aa5.58□□□□□ -1.52
LIMCH1-207ENST00000508466 SIT1Q9Y3P8 196 aa5.58□□□□□ -1.52
LIMCH1-207ENST00000508466 SONP18583 2426 aaKnown RBP5.58□□□□□ -1.52
LIMCH1-207ENST00000508466 IGHV1-18A0A0C4DH31 117 aa5.58□□□□□ -1.52
LIMCH1-207ENST00000508466 SMIM9A6NGZ8 99 aa5.58□□□□□ -1.52
LIMCH1-207ENST00000508466 NPFFO15130 113 aa5.58□□□□□ -1.52
LIMCH1-207ENST00000508466 IGLC6P0CF74 106 aa5.58□□□□□ -1.52
LIMCH1-207ENST00000508466 LTBRP36941 435 aa5.58□□□□□ -1.52
LIMCH1-207ENST00000508466 MUSTN1Q8IVN3 82 aa5.58□□□□□ -1.52
LIMCH1-207ENST00000508466 RNF125Q96EQ8 232 aa5.58□□□□□ -1.52
LIMCH1-207ENST00000508466 SCNM1Q9BWG6 230 aa5.58□□□□□ -1.52
LIMCH1-207ENST00000508466 VCX2Q9H322 139 aa5.58□□□□□ -1.52
LIMCH1-207ENST00000508466 IGKV3D-20A0A0C4DH25 116 aa5.57□□□□□ -1.52
LIMCH1-207ENST00000508466 A0A0J9YY99 117 aa5.57□□□□□ -1.52
LIMCH1-207ENST00000508466 TIMM23O14925 209 aa5.57□□□□□ -1.52
LIMCH1-207ENST00000508466 SRSF2Q01130 221 aaKnown RBP5.57□□□□□ -1.52
LIMCH1-207ENST00000508466 HES1Q14469 280 aa5.57□□□□□ -1.52
LIMCH1-207ENST00000508466 RNASE13Q5GAN3 156 aaKnown RBP5.57□□□□□ -1.52
LIMCH1-207ENST00000508466 TMEM200BQ69YZ2 307 aa5.57□□□□□ -1.52
LIMCH1-207ENST00000508466 C2orf66Q6UXQ4 117 aa5.57□□□□□ -1.52
LIMCH1-207ENST00000508466 ZNF491Q8N8L2 437 aa5.57□□□□□ -1.52
LIMCH1-207ENST00000508466 GAFA1Q96PS6 74 aa5.57□□□□□ -1.52
LIMCH1-207ENST00000508466 IGLV2-18A0A075B6J9 118 aa5.57□□□□□ -1.52
LIMCH1-207ENST00000508466 hADV29S1A0JD25 119 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms