RNA–Protein interactions for RNA: ENST00000502316.5

RNF4-202, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-202ENST00000502316 CASC10Q5T4H9 136 aa10.09□□□□□ -0.79
RNF4-202ENST00000502316 Q6ZTC4 211 aa10.09□□□□□ -0.79
RNF4-202ENST00000502316 LINC00612Q8N6U2 182 aa10.09□□□□□ -0.79
RNF4-202ENST00000502316 SMIM12Q96EX1 92 aa10.09□□□□□ -0.79
RNF4-202ENST00000502316 NOP10Q9NPE3 64 aaKnown RBP10.09□□□□□ -0.79
RNF4-202ENST00000502316 GSN-AS1Q9NRJ2 163 aa10.09□□□□□ -0.79
RNF4-202ENST00000502316 MED9Q9NWA0 146 aa10.09□□□□□ -0.79
RNF4-202ENST00000502316 NAGKQ9UJ70 344 aa10.09□□□□□ -0.79
RNF4-202ENST00000502316 TRBV20OR9-2A0A075B6H5 130 aa10.08□□□□□ -0.8
RNF4-202ENST00000502316 ZNF415Q09FC8 603 aa10.08□□□□□ -0.8
RNF4-202ENST00000502316 CENPWQ5EE01 88 aa10.08□□□□□ -0.8
RNF4-202ENST00000502316 FAM162BQ5T6X4 162 aa10.08□□□□□ -0.8
RNF4-202ENST00000502316 PHLDA1Q8WV24 401 aaPredicted RBP10.08□□□□□ -0.8
RNF4-202ENST00000502316 SDF2L1Q9HCN8 221 aa10.08□□□□□ -0.8
RNF4-202ENST00000502316 IGHV3-16A0A0C4DH30 117 aa10.07□□□□□ -0.8
RNF4-202ENST00000502316 NUPR2A6NF83 97 aa10.07□□□□□ -0.8
RNF4-202ENST00000502316 SH2D1AO60880 128 aa10.07□□□□□ -0.8
RNF4-202ENST00000502316 IGLV2-8P01709 118 aa10.07□□□□□ -0.8
RNF4-202ENST00000502316 TYMSP04818 313 aa10.07□□□□□ -0.8
RNF4-202ENST00000502316 IFITM2Q01629 132 aa10.07□□□□□ -0.8
RNF4-202ENST00000502316 ZFAND6Q6FIF0 208 aa10.07□□□□□ -0.8
RNF4-202ENST00000502316 ZNF767PQ75MW2 155 aa10.07□□□□□ -0.8
RNF4-202ENST00000502316 NHLRC2Q8NBF2 726 aa10.07□□□□□ -0.8
RNF4-202ENST00000502316 EIF5A2Q9GZV4 153 aaKnown RBP10.07□□□□□ -0.8
RNF4-202ENST00000502316 MDFICQ9P1T7 246 aa10.07□□□□□ -0.8
RNF4-202ENST00000502316 TRAV10A0A0B4J240 114 aa10.06□□□□□ -0.8
RNF4-202ENST00000502316 IGKV3D-20A0A0C4DH25 116 aa10.06□□□□□ -0.8
RNF4-202ENST00000502316 RAB19A4D1S5 217 aa10.06□□□□□ -0.8
RNF4-202ENST00000502316 GNRH2O43555 120 aa10.06□□□□□ -0.8
RNF4-202ENST00000502316 SPINK4O60575 86 aa10.06□□□□□ -0.8
RNF4-202ENST00000502316 GNG4P50150 75 aa10.06□□□□□ -0.8
RNF4-202ENST00000502316 DAD1P61803 113 aa10.06□□□□□ -0.8
RNF4-202ENST00000502316 CEMP1Q6PRD7 247 aaPredicted RBP10.06□□□□□ -0.8
RNF4-202ENST00000502316 KMT2CQ8NEZ4 4911 aaKnown RBP10.06□□□□□ -0.8
RNF4-202ENST00000502316 C9JCJ5 164 aa10.05□□□□□ -0.8
RNF4-202ENST00000502316 DEFB130BP0DP73 79 aa10.05□□□□□ -0.8
RNF4-202ENST00000502316 DEFB130AP0DP74 79 aa10.05□□□□□ -0.8
RNF4-202ENST00000502316 LGALS9BQ3B8N2 356 aa10.05□□□□□ -0.8
RNF4-202ENST00000502316 LINC01559Q495D7 138 aa10.05□□□□□ -0.8
RNF4-202ENST00000502316 C18orf15Q96N68 181 aa10.05□□□□□ -0.8
RNF4-202ENST00000502316 SPXQ9BT56 116 aa10.05□□□□□ -0.8
RNF4-202ENST00000502316 PARLQ9H300 379 aa10.05□□□□□ -0.8
RNF4-202ENST00000502316 KRBOX1C9JBD0 128 aa10.04□□□□□ -0.8
RNF4-202ENST00000502316 SRP19P09132 144 aaKnown RBP10.04□□□□□ -0.8
RNF4-202ENST00000502316 RAB14P61106 215 aa10.04□□□□□ -0.8
RNF4-202ENST00000502316 CLLU1Q5K131 121 aa10.04□□□□□ -0.8
RNF4-202ENST00000502316 Q6ZTI0 123 aa10.04□□□□□ -0.8
RNF4-202ENST00000502316 ZNF575Q86XF7 245 aa10.04□□□□□ -0.8
RNF4-202ENST00000502316 SMDT1Q9H4I9 107 aa10.04□□□□□ -0.8
RNF4-202ENST00000502316 DEFB131BA0A096LNP1 70 aa10.03□□□□□ -0.8
RNF4-202ENST00000502316 B4DEV8 164 aa10.03□□□□□ -0.8
RNF4-202ENST00000502316 ORM1P02763 201 aa10.03□□□□□ -0.8
RNF4-202ENST00000502316 DNLZQ5SXM8 178 aa10.03□□□□□ -0.8
RNF4-202ENST00000502316 C9orf85Q96MD7 179 aa10.03□□□□□ -0.8
RNF4-202ENST00000502316 LYSTQ99698 3801 aa10.03□□□□□ -0.8
RNF4-202ENST00000502316 TRGV1A0A0A0MS02 117 aa10.02□□□□□ -0.81
RNF4-202ENST00000502316 GAGE12BA1L429 117 aa10.02□□□□□ -0.81
RNF4-202ENST00000502316 PGPEP1LA6NFU8 196 aa10.02□□□□□ -0.81
RNF4-202ENST00000502316 M0R036 132 aa10.02□□□□□ -0.81
RNF4-202ENST00000502316 GAGE7O76087 117 aa10.02□□□□□ -0.81
RNF4-202ENST00000502316 ATP5G1P05496 136 aa10.02□□□□□ -0.81
RNF4-202ENST00000502316 GAGE12FP0CL80 117 aa10.02□□□□□ -0.81
RNF4-202ENST00000502316 GAGE12GP0CL81 117 aa10.02□□□□□ -0.81
RNF4-202ENST00000502316 GAGE12IP0CL82 117 aa10.02□□□□□ -0.81
RNF4-202ENST00000502316 RNASE3P12724 160 aaKnown RBP10.02□□□□□ -0.81
RNF4-202ENST00000502316 PRR27Q6MZM9 219 aa10.02□□□□□ -0.81
RNF4-202ENST00000502316 RASL10AQ92737 203 aa10.02□□□□□ -0.81
RNF4-202ENST00000502316 KLK5Q9Y337 293 aaPredicted RBP10.02□□□□□ -0.81
RNF4-202ENST00000502316 DNAH1Q9P2D7 4330 aa10.01□□□□□ -0.81
RNF4-202ENST00000502316 C19orf71A6NCJ1 209 aa10.01□□□□□ -0.81
RNF4-202ENST00000502316 M0R2P5 195 aa10.01□□□□□ -0.81
RNF4-202ENST00000502316 CXCL1P09341 107 aa10.01□□□□□ -0.81
RNF4-202ENST00000502316 MGST1P10620 155 aaKnown RBP10.01□□□□□ -0.81
RNF4-202ENST00000502316 ASIPP42127 132 aa10.01□□□□□ -0.81
RNF4-202ENST00000502316 SRSF3P84103 164 aaKnown RBP10.01□□□□□ -0.81
RNF4-202ENST00000502316 PEA15Q15121 130 aa10.01□□□□□ -0.81
RNF4-202ENST00000502316 PTH2Q96A98 100 aa10.01□□□□□ -0.81
RNF4-202ENST00000502316 BIN3Q9NQY0 253 aa10.01□□□□□ -0.81
RNF4-202ENST00000502316 MRPL16Q9NX20 251 aaKnown RBP10.01□□□□□ -0.81
RNF4-202ENST00000502316 IL36BQ9NZH7 164 aa10.01□□□□□ -0.81
RNF4-202ENST00000502316 SACSQ9NZJ4 4579 aa10□□□□□ -0.81
RNF4-202ENST00000502316 C9JQL5 133 aa10□□□□□ -0.81
RNF4-202ENST00000502316 K7EN84 100 aa10□□□□□ -0.81
RNF4-202ENST00000502316 CEBPGP53567 150 aa10□□□□□ -0.81
RNF4-202ENST00000502316 OCC1Q8TAD7 63 aa10□□□□□ -0.81
RNF4-202ENST00000502316 FAM210BQ96KR6 192 aa10□□□□□ -0.81
RNF4-202ENST00000502316 SMIM7Q9BQ49 75 aa10□□□□□ -0.81
RNF4-202ENST00000502316 LY96Q9Y6Y9 160 aa10□□□□□ -0.81
RNF4-202ENST00000502316 TRGV2A0A075B6R0 118 aa9.99□□□□□ -0.81
RNF4-202ENST00000502316 S100A4P26447 101 aaKnown RBP9.99□□□□□ -0.81
RNF4-202ENST00000502316 TCTAP57738 103 aa9.99□□□□□ -0.81
RNF4-202ENST00000502316 RPL19P84098 196 aaKnown RBP9.99□□□□□ -0.81
RNF4-202ENST00000502316 NDUFAF3Q9BU61 184 aa9.99□□□□□ -0.81
RNF4-202ENST00000502316 SCRT2Q9NQ03 307 aa9.99□□□□□ -0.81
RNF4-202ENST00000502316 ALMS1Q8TCU4 4167 aa9.98□□□□□ -0.81
RNF4-202ENST00000502316 MUC4Q99102 2169 aa9.98□□□□□ -0.81
RNF4-202ENST00000502316 TMSB15BA0A087X1C1 80 aa9.98□□□□□ -0.81
RNF4-202ENST00000502316 GRIFINA4D1Z8 144 aa9.98□□□□□ -0.81
RNF4-202ENST00000502316 ZNF727A8MUV8 499 aa9.98□□□□□ -0.81
RNF4-202ENST00000502316 MED14OSP0DP75 135 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms