RNA–Protein interactions for RNA: ENST00000498514.5

SGMS1-205, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-205ENST00000498514 C14orf105Q9NVL8 296 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 FBXL12Q9NXK8 326 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 C3orf18Q9UK00 162 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 C15orf41Q9Y2V0 281 aa-0.04□□□□□ -2.42
SGMS1-205ENST00000498514 ROCK2O75116 1388 aaKnown RBP-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 RAD50Q92878 1312 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 IGHV1-58A0A0C4DH39 117 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 TRPC5OSA6NMA1 111 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 HSBP1L1C9JCN9 74 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 SMLR1H3BR10 107 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 M0R378 163 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 SLC16A4O15374 487 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 HLA-DRAP01903 254 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 TFF1P04155 84 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 TYMSP04818 313 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 OCM2P0CE71 109 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 RD3LP0DJH9 198 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 C8orf88P0DMB2 117 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 CCL1P22362 96 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 S100A4P26447 101 aaKnown RBP-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 RPL12P30050 165 aaKnown RBP-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 ZNF137PP52743 207 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 FOXA3P55318 350 aaPredicted RBP-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 MAP3K7CLP57077 242 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 RAB5BP61020 215 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 YPEL3P61236 119 aaPredicted RBP-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 PMS2P3Q13401 168 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 MED21Q13503 144 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 PPP1R1AQ13522 171 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 RSU1Q15404 277 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 KISS1Q15726 138 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 ESRGQ1W209 222 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 CLVS2Q5SYC1 327 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 OGFRL1Q5TC84 451 aaPredicted RBP-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 CLEC6AQ6EIG7 209 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 LPCAT3Q6P1A2 487 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 HAGHLQ6PII5 290 aaPredicted RBP-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 Q6Q795 121 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 LRRN1Q6UXK5 716 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 PLEKHG7Q6ZR37 379 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 Q6ZS49 121 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 LYG2Q86SG7 212 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 COMMD7Q86VX2 200 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 CLVS1Q8IUQ0 354 aaPredicted RBP-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 BOD1L2Q8IYS8 172 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 CLECL1Q8IZS7 167 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 DEFB108BQ8NET1 73 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 OR4S1Q8NGB4 309 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 OR13D1Q8NGV5 346 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 PIGXQ8TBF5 258 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 TMEM254Q8TBM7 123 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 ZNF431Q8TF32 576 aaPredicted RBP-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 GPR146Q96CH1 333 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 OR52E6Q96RD3 313 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 LYSMD1Q96S90 227 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 C7orf50Q9BRJ6 194 aaKnown RBP-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 WDR61Q9GZS3 305 aaKnown RBP-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 TREM1Q9NP99 234 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 C14orf132Q9NPU4 83 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 PRTFDC1Q9NRG1 225 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 OSTCQ9NRP0 149 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 PLEKHJ1Q9NW61 149 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 USE1Q9NZ43 259 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 ORMDL1Q9P0S3 153 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 EPDR1Q9UM22 224 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 RNF11Q9Y3C5 154 aa-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 V9GYY5 206 aaPredicted RBP-0.05□□□□□ -2.42
SGMS1-205ENST00000498514 EVC2Q86UK5 1308 aa-0.06□□□□□ -2.42
SGMS1-205ENST00000498514 TRAV9-1A0A075B6T8 112 aa-0.06□□□□□ -2.42
SGMS1-205ENST00000498514 A0A087WTM6 91 aa-0.06□□□□□ -2.42
SGMS1-205ENST00000498514 A0A0A6YYH2 397 aa-0.06□□□□□ -2.42
SGMS1-205ENST00000498514 TRAV17A0A0B4J275 112 aa-0.06□□□□□ -2.42
SGMS1-205ENST00000498514 TRBV30A0A0K0K1B3 111 aa-0.06□□□□□ -2.42
SGMS1-205ENST00000498514 SPTY2D1-AS1A0A0U1RR47 76 aa-0.06□□□□□ -2.42
SGMS1-205ENST00000498514 NBDYA0A0U1RRE5 68 aa-0.06□□□□□ -2.42
SGMS1-205ENST00000498514 TCRBV4S1A1TA0A5B7 111 aa-0.06□□□□□ -2.42
SGMS1-205ENST00000498514 ERICH2A1L162 156 aa-0.06□□□□□ -2.42
SGMS1-205ENST00000498514 FABP12A6NFH5 140 aa-0.06□□□□□ -2.42
SGMS1-205ENST00000498514 A6NJ64 397 aa-0.06□□□□□ -2.42
SGMS1-205ENST00000498514 IQCF5A8MTL0 148 aa-0.06□□□□□ -2.42
SGMS1-205ENST00000498514 GOLGA8KD6RF30 607 aa-0.06□□□□□ -2.42
SGMS1-205ENST00000498514 LRRN3E7EW58 273 aa-0.06□□□□□ -2.42
SGMS1-205ENST00000498514 F5H768 121 aa-0.06□□□□□ -2.42
SGMS1-205ENST00000498514 F8W1H4 67 aa-0.06□□□□□ -2.42
SGMS1-205ENST00000498514 H3BRM9 83 aa-0.06□□□□□ -2.42
SGMS1-205ENST00000498514 J3QRK9 145 aa-0.06□□□□□ -2.42
SGMS1-205ENST00000498514 AHSA1O95433 338 aa-0.06□□□□□ -2.42
SGMS1-205ENST00000498514 DHFRP00374 187 aa-0.06□□□□□ -2.42
SGMS1-205ENST00000498514 SPINK1P00995 79 aa-0.06□□□□□ -2.42
SGMS1-205ENST00000498514 IGF2P01344 180 aa-0.06□□□□□ -2.42
SGMS1-205ENST00000498514 IGKV1-5P01602 117 aa-0.06□□□□□ -2.42
SGMS1-205ENST00000498514 HLA-DRB1P01911 266 aa-0.06□□□□□ -2.42
SGMS1-205ENST00000498514 OR5G3P0C626 314 aa-0.06□□□□□ -2.42
SGMS1-205ENST00000498514 OR4E1P0C645 316 aa-0.06□□□□□ -2.42
SGMS1-205ENST00000498514 CASP1P29466 404 aa-0.06□□□□□ -2.42
SGMS1-205ENST00000498514 ANP32AP39687 249 aaKnown RBP-0.06□□□□□ -2.42
SGMS1-205ENST00000498514 MAP2K4P45985 399 aa-0.06□□□□□ -2.42
SGMS1-205ENST00000498514 HADHBP55084 474 aaKnown RBP-0.06□□□□□ -2.42
SGMS1-205ENST00000498514 AP3S2P59780 193 aa-0.06□□□□□ -2.42
SGMS1-205ENST00000498514 PSME3P61289 254 aa-0.06□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms