RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 PF4P02776 101 aa7.69□□□□□ -1.18
HDAC3-214ENST00000495485 ZNF688P0C7X2 276 aa7.69□□□□□ -1.18
HDAC3-214ENST00000495485 CTRLP40313 264 aa7.69□□□□□ -1.18
HDAC3-214ENST00000495485 ZNF80P51504 273 aaPredicted RBP7.69□□□□□ -1.18
HDAC3-214ENST00000495485 NSUN5P1Q3KNT7 163 aa7.69□□□□□ -1.18
HDAC3-214ENST00000495485 C18orf65Q6ZTR6 163 aa7.69□□□□□ -1.18
HDAC3-214ENST00000495485 C11orf44Q8N8P7 122 aa7.69□□□□□ -1.18
HDAC3-214ENST00000495485 GATD1Q8NB37 220 aa7.69□□□□□ -1.18
HDAC3-214ENST00000495485 WFDC9Q8NEX5 89 aa7.69□□□□□ -1.18
HDAC3-214ENST00000495485 OR2K2Q8NGT1 345 aa7.69□□□□□ -1.18
HDAC3-214ENST00000495485 RAX2Q96IS3 184 aa7.69□□□□□ -1.18
HDAC3-214ENST00000495485 FAM19A4Q96LR4 140 aa7.69□□□□□ -1.18
HDAC3-214ENST00000495485 ARMS2P0C7Q2 107 aa7.68□□□□□ -1.18
HDAC3-214ENST00000495485 MED14OSP0DP75 135 aa7.68□□□□□ -1.18
HDAC3-214ENST00000495485 GZMBP10144 247 aa7.68□□□□□ -1.18
HDAC3-214ENST00000495485 S100A4P26447 101 aaKnown RBP7.68□□□□□ -1.18
HDAC3-214ENST00000495485 SRIP30626 198 aa7.68□□□□□ -1.18
HDAC3-214ENST00000495485 DEFB114Q30KQ6 69 aa7.68□□□□□ -1.18
HDAC3-214ENST00000495485 ZNF493Q6ZR52 646 aa7.68□□□□□ -1.18
HDAC3-214ENST00000495485 APRG1Q8IVJ8 170 aa7.68□□□□□ -1.18
HDAC3-214ENST00000495485 HIST3H2BBQ8N257 126 aa7.68□□□□□ -1.18
HDAC3-214ENST00000495485 OR5AL1P0C617 328 aa7.67□□□□□ -1.18
HDAC3-214ENST00000495485 IGLC6P0CF74 106 aa7.67□□□□□ -1.18
HDAC3-214ENST00000495485 ZNF705DP0CH99 300 aaPredicted RBP7.67□□□□□ -1.18
HDAC3-214ENST00000495485 ZNF705BP0CI00 300 aaPredicted RBP7.67□□□□□ -1.18
HDAC3-214ENST00000495485 SMIM6P0DI80 62 aa7.67□□□□□ -1.18
HDAC3-214ENST00000495485 RNASE4P34096 147 aaKnown RBP7.67□□□□□ -1.18
HDAC3-214ENST00000495485 ASIPP42127 132 aa7.67□□□□□ -1.18
HDAC3-214ENST00000495485 CDKN1BP46527 198 aa7.67□□□□□ -1.18
HDAC3-214ENST00000495485 TWIST1Q15672 202 aa7.67□□□□□ -1.18
HDAC3-214ENST00000495485 FAM159AQ6UWV7 190 aa7.67□□□□□ -1.18
HDAC3-214ENST00000495485 ZFAND2AQ8N6M9 145 aa7.67□□□□□ -1.18
HDAC3-214ENST00000495485 DUX3Q96PT4 197 aa7.67□□□□□ -1.18
HDAC3-214ENST00000495485 LOC102724200A0A096LPH7 203 aaPredicted RBP7.66□□□□□ -1.18
HDAC3-214ENST00000495485 C7orf71A4D174 169 aa7.66□□□□□ -1.18
HDAC3-214ENST00000495485 KLLNB2CW77 178 aa7.66□□□□□ -1.18
HDAC3-214ENST00000495485 AMBPP02760 352 aa7.66□□□□□ -1.18
HDAC3-214ENST00000495485 PPBPP02775 128 aa7.66□□□□□ -1.18
HDAC3-214ENST00000495485 PRB4P10163 310 aaPredicted RBP7.66□□□□□ -1.18
HDAC3-214ENST00000495485 ESDP10768 282 aa7.66□□□□□ -1.18
HDAC3-214ENST00000495485 FABP4P15090 132 aa7.66□□□□□ -1.18
HDAC3-214ENST00000495485 CD33P20138 364 aa7.66□□□□□ -1.18
HDAC3-214ENST00000495485 NTF3P20783 257 aa7.66□□□□□ -1.18
HDAC3-214ENST00000495485 EDN2P20800 178 aa7.66□□□□□ -1.18
HDAC3-214ENST00000495485 INSL3P51460 131 aa7.66□□□□□ -1.18
HDAC3-214ENST00000495485 SLAQ13239 276 aa7.66□□□□□ -1.18
HDAC3-214ENST00000495485 KIAA1644Q3SXP7 199 aa7.66□□□□□ -1.18
HDAC3-214ENST00000495485 DNLZQ5SXM8 178 aa7.66□□□□□ -1.18
HDAC3-214ENST00000495485 SPANXN1Q5VSR9 72 aa7.66□□□□□ -1.18
HDAC3-214ENST00000495485 TMEM61Q8N0U2 210 aa7.66□□□□□ -1.18
HDAC3-214ENST00000495485 PACRGQ96M98 296 aaPredicted RBP7.66□□□□□ -1.18
HDAC3-214ENST00000495485 ALKBH7Q9BT30 221 aaPredicted RBP7.66□□□□□ -1.18
HDAC3-214ENST00000495485 CNFNQ9BYD5 112 aa7.66□□□□□ -1.18
HDAC3-214ENST00000495485 TMEM191AQ9H0A3 160 aa7.66□□□□□ -1.18
HDAC3-214ENST00000495485 IGKV3D-20A0A0C4DH25 116 aa7.65□□□□□ -1.18
HDAC3-214ENST00000495485 GRIFINA4D1Z8 144 aa7.65□□□□□ -1.18
HDAC3-214ENST00000495485 F6UB75 175 aa7.65□□□□□ -1.18
HDAC3-214ENST00000495485 J3KRW8 73 aa7.65□□□□□ -1.18
HDAC3-214ENST00000495485 SNAI2O43623 268 aa7.65□□□□□ -1.18
HDAC3-214ENST00000495485 RAB4AP20338 218 aa7.65□□□□□ -1.18
HDAC3-214ENST00000495485 PMCHP20382 165 aa7.65□□□□□ -1.18
HDAC3-214ENST00000495485 DEFB131AP59861 70 aa7.65□□□□□ -1.18
HDAC3-214ENST00000495485 PDZD11Q5EBL8 140 aa7.65□□□□□ -1.18
HDAC3-214ENST00000495485 ADAMTSL5Q6ZMM2 481 aa7.65□□□□□ -1.18
HDAC3-214ENST00000495485 LINC00482Q8N8I6 264 aa7.65□□□□□ -1.18
HDAC3-214ENST00000495485 CLUHP3Q96NS8 147 aa7.65□□□□□ -1.18
HDAC3-214ENST00000495485 SSBP4Q9BWG4 385 aaPredicted RBP7.65□□□□□ -1.18
HDAC3-214ENST00000495485 SAMD10Q9BYL1 202 aa7.65□□□□□ -1.18
HDAC3-214ENST00000495485 NAGKQ9UJ70 344 aa7.65□□□□□ -1.18
HDAC3-214ENST00000495485 IGHV4-4A0A075B6R2 117 aa7.64□□□□□ -1.19
HDAC3-214ENST00000495485 SAP30O75446 220 aa7.64□□□□□ -1.19
HDAC3-214ENST00000495485 FRMD6-AS1P0C7T7 363 aa7.64□□□□□ -1.19
HDAC3-214ENST00000495485 HLA-DRB4P13762 266 aa7.64□□□□□ -1.19
HDAC3-214ENST00000495485 NUTF2P61970 127 aaKnown RBP7.64□□□□□ -1.19
HDAC3-214ENST00000495485 CD300EQ496F6 205 aaPredicted RBP7.64□□□□□ -1.19
HDAC3-214ENST00000495485 FAM104BQ5XKR9 115 aa7.64□□□□□ -1.19
HDAC3-214ENST00000495485 LINC00518Q8N0U6 118 aa7.64□□□□□ -1.19
HDAC3-214ENST00000495485 OR10D4PQ8NGN7 298 aa7.64□□□□□ -1.19
HDAC3-214ENST00000495485 CHCHD1Q96BP2 118 aaKnown RBP7.64□□□□□ -1.19
HDAC3-214ENST00000495485 HIST1H2BLQ99880 126 aa7.64□□□□□ -1.19
HDAC3-214ENST00000495485 C20orf144Q9BQM9 153 aa7.64□□□□□ -1.19
HDAC3-214ENST00000495485 LAMTOR2Q9Y2Q5 125 aa7.64□□□□□ -1.19
HDAC3-214ENST00000495485 PHLDA3Q9Y5J5 127 aa7.64□□□□□ -1.19
HDAC3-214ENST00000495485 HLA-DRB4X5D2U9 266 aa7.64□□□□□ -1.19
HDAC3-214ENST00000495485 TRGV11A0A075B6L2 103 aa7.63□□□□□ -1.19
HDAC3-214ENST00000495485 OR11H12B2RN74 326 aa7.63□□□□□ -1.19
HDAC3-214ENST00000495485 WIPF1O43516 503 aa7.63□□□□□ -1.19
HDAC3-214ENST00000495485 HSBP1O75506 76 aa7.63□□□□□ -1.19
HDAC3-214ENST00000495485 ANXA2RQ3ZCQ2 193 aa7.63□□□□□ -1.19
HDAC3-214ENST00000495485 GDF5OSQ5U4N7 250 aa7.63□□□□□ -1.19
HDAC3-214ENST00000495485 ORMDL3Q8N138 153 aa7.63□□□□□ -1.19
HDAC3-214ENST00000495485 C18orf32Q8TCD1 76 aa7.63□□□□□ -1.19
HDAC3-214ENST00000495485 FAM110AQ9BQ89 295 aa7.63□□□□□ -1.19
HDAC3-214ENST00000495485 A8MTW9 85 aa7.62□□□□□ -1.19
HDAC3-214ENST00000495485 H3BMM0 161 aa7.62□□□□□ -1.19
HDAC3-214ENST00000495485 SERF1AO75920 110 aa7.62□□□□□ -1.19
HDAC3-214ENST00000495485 CKS2P33552 79 aa7.62□□□□□ -1.19
HDAC3-214ENST00000495485 TDRG1Q3Y452 100 aa7.62□□□□□ -1.19
HDAC3-214ENST00000495485 C9orf66Q5T8R8 295 aa7.62□□□□□ -1.19
HDAC3-214ENST00000495485 GFI1BQ5VTD9 330 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms