RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 RHOHQ15669 191 aa11.68□□□□□ -0.54
NUP50-218ENST00000493456 PRADC1Q9BSG0 188 aa11.68□□□□□ -0.54
NUP50-218ENST00000493456 CIDEAO60543 219 aa11.67□□□□□ -0.54
NUP50-218ENST00000493456 SLC25A29Q8N8R3 303 aa11.67□□□□□ -0.54
NUP50-218ENST00000493456 TMED6Q8WW62 240 aa11.67□□□□□ -0.54
NUP50-218ENST00000493456 TRAV8-3A0A0A6YYJ7 113 aa11.66□□□□□ -0.54
NUP50-218ENST00000493456 TRBV6-4A0A1B0GX49 114 aa11.66□□□□□ -0.54
NUP50-218ENST00000493456 KRTAP10-4P60372 401 aaPredicted RBP11.66□□□□□ -0.54
NUP50-218ENST00000493456 S100A10P60903 97 aa11.66□□□□□ -0.54
NUP50-218ENST00000493456 C2orf50Q96LR7 162 aa11.66□□□□□ -0.54
NUP50-218ENST00000493456 ATP5SQ99766 215 aa11.66□□□□□ -0.54
NUP50-218ENST00000493456 GTSF1LQ9H1H1 148 aa11.66□□□□□ -0.54
NUP50-218ENST00000493456 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.65□□□□□ -0.54
NUP50-218ENST00000493456 RANP62826 216 aaKnown RBP11.65□□□□□ -0.54
NUP50-218ENST00000493456 KCNIP2Q9NS61 270 aa11.65□□□□□ -0.54
NUP50-218ENST00000493456 TRAV21A0A0B4J279 112 aa11.64□□□□□ -0.55
NUP50-218ENST00000493456 DIRC3C9JPN6 131 aa11.64□□□□□ -0.55
NUP50-218ENST00000493456 LECT2O14960 151 aa11.64□□□□□ -0.55
NUP50-218ENST00000493456 GNRH2O43555 120 aa11.64□□□□□ -0.55
NUP50-218ENST00000493456 OR7C2O60412 319 aa11.64□□□□□ -0.55
NUP50-218ENST00000493456 TYMSP04818 313 aa11.64□□□□□ -0.55
NUP50-218ENST00000493456 TOR2AQ5JU69 321 aa11.64□□□□□ -0.55
NUP50-218ENST00000493456 CHAC1Q9BUX1 264 aa11.64□□□□□ -0.55
NUP50-218ENST00000493456 SH3BGRL3Q9H299 93 aa11.64□□□□□ -0.55
NUP50-218ENST00000493456 SDF2L1Q9HCN8 221 aa11.64□□□□□ -0.55
NUP50-218ENST00000493456 COX11Q9Y6N1 276 aa11.64□□□□□ -0.55
NUP50-218ENST00000493456 THAP6Q8TBB0 222 aa11.63□□□□□ -0.55
NUP50-218ENST00000493456 KCNS1Q96KK3 526 aa11.63□□□□□ -0.55
NUP50-218ENST00000493456 UBE2L3P68036 154 aaKnown RBP11.62□□□□□ -0.55
NUP50-218ENST00000493456 RAB32Q13637 225 aa11.62□□□□□ -0.55
NUP50-218ENST00000493456 ACOT6Q3I5F7 207 aaPredicted RBP11.62□□□□□ -0.55
NUP50-218ENST00000493456 CFAP126Q5VTH2 177 aa11.62□□□□□ -0.55
NUP50-218ENST00000493456 ATP6V0E2Q8NHE4 81 aa11.62□□□□□ -0.55
NUP50-218ENST00000493456 IL15RAQ13261 267 aa11.61□□□□□ -0.55
NUP50-218ENST00000493456 ZNF876PQ49A33 203 aa11.61□□□□□ -0.55
NUP50-218ENST00000493456 RBFOX3A6NFN3 312 aa11.6□□□□□ -0.55
NUP50-218ENST00000493456 CCDC160A6NGH7 325 aa11.6□□□□□ -0.55
NUP50-218ENST00000493456 GGTLC3B5MD39 225 aa11.6□□□□□ -0.55
NUP50-218ENST00000493456 RS1O15537 224 aa11.6□□□□□ -0.55
NUP50-218ENST00000493456 MGST1P10620 155 aaKnown RBP11.6□□□□□ -0.55
NUP50-218ENST00000493456 LINC01620Q4KN68 170 aa11.6□□□□□ -0.55
NUP50-218ENST00000493456 Q8N976 141 aa11.6□□□□□ -0.55
NUP50-218ENST00000493456 OR5C1Q8NGR4 320 aa11.6□□□□□ -0.55
NUP50-218ENST00000493456 CIRBP-AS1Q8TBR5 109 aa11.6□□□□□ -0.55
NUP50-218ENST00000493456 ASB13Q8WXK3 278 aa11.6□□□□□ -0.55
NUP50-218ENST00000493456 SDHCQ99643 169 aaPredicted RBP11.6□□□□□ -0.55
NUP50-218ENST00000493456 IGLV2-8P01709 118 aa11.59□□□□□ -0.55
NUP50-218ENST00000493456 IL7P13232 177 aa11.59□□□□□ -0.55
NUP50-218ENST00000493456 KHDC3LQ587J8 217 aa11.59□□□□□ -0.55
NUP50-218ENST00000493456 Q8N3U1 123 aa11.59□□□□□ -0.55
NUP50-218ENST00000493456 BAALCQ8WXS3 180 aa11.59□□□□□ -0.55
NUP50-218ENST00000493456 RMI2Q96E14 147 aa11.59□□□□□ -0.55
NUP50-218ENST00000493456 SEC22CQ9BRL7 303 aa11.59□□□□□ -0.55
NUP50-218ENST00000493456 C17orf112F2Z3M2 114 aa11.58□□□□□ -0.56
NUP50-218ENST00000493456 NHLH2Q02577 135 aa11.58□□□□□ -0.56
NUP50-218ENST00000493456 FAM74A1Q5RGS3 127 aa11.58□□□□□ -0.56
NUP50-218ENST00000493456 DPPA3Q6W0C5 159 aa11.58□□□□□ -0.56
NUP50-218ENST00000493456 DAZ4Q86SG3 579 aaKnown RBP11.58□□□□□ -0.56
NUP50-218ENST00000493456 CMTM2Q8TAZ6 248 aa11.58□□□□□ -0.56
NUP50-218ENST00000493456 HYLS1Q96M11 299 aa11.58□□□□□ -0.56
NUP50-218ENST00000493456 WDR61Q9GZS3 305 aaKnown RBP11.58□□□□□ -0.56
NUP50-218ENST00000493456 DAZ3Q9NR90 486 aaKnown RBP11.58□□□□□ -0.56
NUP50-218ENST00000493456 OTORQ9NRC9 128 aa11.58□□□□□ -0.56
NUP50-218ENST00000493456 TRAV6A0A075B6T7 132 aa11.57□□□□□ -0.56
NUP50-218ENST00000493456 IGHV3-73A0A0B4J1V6 119 aa11.57□□□□□ -0.56
NUP50-218ENST00000493456 F6UZH7 168 aa11.57□□□□□ -0.56
NUP50-218ENST00000493456 TCRBP04435 133 aa11.57□□□□□ -0.56
NUP50-218ENST00000493456 TAS2R45P59539 299 aa11.57□□□□□ -0.56
NUP50-218ENST00000493456 ARL6IP6Q8N6S5 226 aa11.57□□□□□ -0.56
NUP50-218ENST00000493456 TREM1Q9NP99 234 aa11.57□□□□□ -0.56
NUP50-218ENST00000493456 RNF222A6NCQ9 220 aa11.56□□□□□ -0.56
NUP50-218ENST00000493456 LYRM1O43325 122 aa11.56□□□□□ -0.56
NUP50-218ENST00000493456 PTH2Q96A98 100 aa11.56□□□□□ -0.56
NUP50-218ENST00000493456 NMES1Q9C002 83 aa11.56□□□□□ -0.56
NUP50-218ENST00000493456 NUDT15Q9NV35 164 aa11.56□□□□□ -0.56
NUP50-218ENST00000493456 RPH3ALQ9UNE2 315 aa11.56□□□□□ -0.56
NUP50-218ENST00000493456 A0A087WWC5 75 aa11.55□□□□□ -0.56
NUP50-218ENST00000493456 PGPA6NDG6 321 aa11.55□□□□□ -0.56
NUP50-218ENST00000493456 SEC11BP0C7V7 166 aa11.55□□□□□ -0.56
NUP50-218ENST00000493456 LINC00694P0DN24 101 aa11.55□□□□□ -0.56
NUP50-218ENST00000493456 GOLT1AQ6ZVE7 132 aa11.55□□□□□ -0.56
NUP50-218ENST00000493456 TVP23CQ96ET8 276 aa11.55□□□□□ -0.56
NUP50-218ENST00000493456 TRAV8-1A0A0A6YYK1 113 aa11.54□□□□□ -0.56
NUP50-218ENST00000493456 PLA2G10O15496 165 aa11.54□□□□□ -0.56
NUP50-218ENST00000493456 IGLV2-11P01706 119 aa11.54□□□□□ -0.56
NUP50-218ENST00000493456 ZNF506Q5JVG8 444 aa11.54□□□□□ -0.56
NUP50-218ENST00000493456 C9orf85Q96MD7 179 aa11.54□□□□□ -0.56
NUP50-218ENST00000493456 RNF213Q63HN8 5207 aa11.54□□□□□ -0.56
NUP50-218ENST00000493456 RPL37AP61513 92 aaKnown RBP11.53□□□□□ -0.56
NUP50-218ENST00000493456 NDFIP1Q9BT67 221 aa11.53□□□□□ -0.56
NUP50-218ENST00000493456 MBD2Q9UBB5 411 aa11.53□□□□□ -0.56
NUP50-218ENST00000493456 URGCP-MRPS24S4R325 110 aa11.53□□□□□ -0.56
NUP50-218ENST00000493456 IGKV2D-24A0A075B6R9 120 aa11.52□□□□□ -0.57
NUP50-218ENST00000493456 GAGE12JA6NER3 117 aa11.52□□□□□ -0.57
NUP50-218ENST00000493456 LRP2P98164 4655 aa11.52□□□□□ -0.57
NUP50-218ENST00000493456 GAGE1Q13065 139 aa11.52□□□□□ -0.57
NUP50-218ENST00000493456 GAGE4Q13068 117 aa11.52□□□□□ -0.57
NUP50-218ENST00000493456 GAGE5Q13069 117 aa11.52□□□□□ -0.57
NUP50-218ENST00000493456 GAGE13Q4V321 117 aa11.52□□□□□ -0.57
NUP50-218ENST00000493456 FFAR4Q5NUL3 377 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms