RNA–Protein interactions for RNA: ENST00000493298.1

TM4SF1-203, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 4

Gene TM4SF1, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-203ENST00000493298 A0A087WWC5 75 aa6.53□□□□□ -1.36
TM4SF1-203ENST00000493298 TRAV12-3A0A0B4J271 114 aa6.53□□□□□ -1.36
TM4SF1-203ENST00000493298 SMIM27A0A1W2PRY6 76 aa6.53□□□□□ -1.36
TM4SF1-203ENST00000493298 PLAC8L1A1L4L8 177 aa6.53□□□□□ -1.36
TM4SF1-203ENST00000493298 DUSP14O95147 198 aaKnown RBP6.53□□□□□ -1.36
TM4SF1-203ENST00000493298 IGLC6P0CF74 106 aa6.53□□□□□ -1.36
TM4SF1-203ENST00000493298 AZU1P20160 251 aa6.53□□□□□ -1.36
TM4SF1-203ENST00000493298 PNRC1Q12796 327 aaPredicted RBP6.53□□□□□ -1.36
TM4SF1-203ENST00000493298 ANXA2RQ3ZCQ2 193 aa6.53□□□□□ -1.36
TM4SF1-203ENST00000493298 SMUG1Q53HV7 270 aa6.53□□□□□ -1.36
TM4SF1-203ENST00000493298 PRR27Q6MZM9 219 aa6.53□□□□□ -1.36
TM4SF1-203ENST00000493298 TMEM88Q6PEY1 159 aa6.53□□□□□ -1.36
TM4SF1-203ENST00000493298 SVBPQ8N300 66 aa6.53□□□□□ -1.36
TM4SF1-203ENST00000493298 OR10G8Q8NGN5 311 aa6.53□□□□□ -1.36
TM4SF1-203ENST00000493298 OVOL2Q9BRP0 275 aa6.53□□□□□ -1.36
TM4SF1-203ENST00000493298 PYGO2Q9BRQ0 406 aa6.53□□□□□ -1.36
TM4SF1-203ENST00000493298 C7orf71A4D174 169 aa6.52□□□□□ -1.37
TM4SF1-203ENST00000493298 COLCA2A8K830 154 aa6.52□□□□□ -1.37
TM4SF1-203ENST00000493298 FABP5P3A8MUU1 101 aa6.52□□□□□ -1.37
TM4SF1-203ENST00000493298 K7EQM0 130 aa6.52□□□□□ -1.37
TM4SF1-203ENST00000493298 M0R036 132 aa6.52□□□□□ -1.37
TM4SF1-203ENST00000493298 CXCL1P09341 107 aa6.52□□□□□ -1.37
TM4SF1-203ENST00000493298 RNASE3P12724 160 aaKnown RBP6.52□□□□□ -1.37
TM4SF1-203ENST00000493298 CDKN1BP46527 198 aa6.52□□□□□ -1.37
TM4SF1-203ENST00000493298 FOXA3P55318 350 aaPredicted RBP6.52□□□□□ -1.37
TM4SF1-203ENST00000493298 CMC4P56277 68 aaPredicted RBP6.52□□□□□ -1.37
TM4SF1-203ENST00000493298 FAM3BP58499 235 aaPredicted RBP6.52□□□□□ -1.37
TM4SF1-203ENST00000493298 LINC01559Q495D7 138 aa6.52□□□□□ -1.37
TM4SF1-203ENST00000493298 ZMAT4Q9H898 229 aa6.52□□□□□ -1.37
TM4SF1-203ENST00000493298 TMEM242Q9NWH2 141 aa6.52□□□□□ -1.37
TM4SF1-203ENST00000493298 XCL2Q9UBD3 114 aa6.52□□□□□ -1.37
TM4SF1-203ENST00000493298 DNAH10Q8IVF4 4471 aa6.52□□□□□ -1.37
TM4SF1-203ENST00000493298 TMSB15BA0A087X1C1 80 aa6.51□□□□□ -1.37
TM4SF1-203ENST00000493298 GRIFINA4D1Z8 144 aa6.51□□□□□ -1.37
TM4SF1-203ENST00000493298 B4DEV8 164 aa6.51□□□□□ -1.37
TM4SF1-203ENST00000493298 SNAPINO95295 136 aa6.51□□□□□ -1.37
TM4SF1-203ENST00000493298 GPX1P07203 203 aa6.51□□□□□ -1.37
TM4SF1-203ENST00000493298 LEPP41159 167 aa6.51□□□□□ -1.37
TM4SF1-203ENST00000493298 ELOBQ15370 118 aa6.51□□□□□ -1.37
TM4SF1-203ENST00000493298 RHEBQ15382 184 aa6.51□□□□□ -1.37
TM4SF1-203ENST00000493298 TDRG1Q3Y452 100 aa6.51□□□□□ -1.37
TM4SF1-203ENST00000493298 MUC21Q5SSG8 566 aa6.51□□□□□ -1.37
TM4SF1-203ENST00000493298 DNLZQ5SXM8 178 aa6.51□□□□□ -1.37
TM4SF1-203ENST00000493298 IBA57Q5T440 356 aaKnown RBP6.51□□□□□ -1.37
TM4SF1-203ENST00000493298 FAM162BQ5T6X4 162 aa6.51□□□□□ -1.37
TM4SF1-203ENST00000493298 ZNF705AQ6ZN79 300 aaPredicted RBP6.51□□□□□ -1.37
TM4SF1-203ENST00000493298 C11orf72Q8NBR9 251 aa6.51□□□□□ -1.37
TM4SF1-203ENST00000493298 SSBP4Q9BWG4 385 aaPredicted RBP6.51□□□□□ -1.37
TM4SF1-203ENST00000493298 SCRT2Q9NQ03 307 aa6.51□□□□□ -1.37
TM4SF1-203ENST00000493298 RPS10P5Q9NQ39 176 aa6.51□□□□□ -1.37
TM4SF1-203ENST00000493298 MDFICQ9P1T7 246 aa6.51□□□□□ -1.37
TM4SF1-203ENST00000493298 IGHV3-16A0A0C4DH30 117 aa6.5□□□□□ -1.37
TM4SF1-203ENST00000493298 PHOX2AO14813 284 aa6.5□□□□□ -1.37
TM4SF1-203ENST00000493298 GATCO43716 136 aaKnown RBP6.5□□□□□ -1.37
TM4SF1-203ENST00000493298 TYMSP04818 313 aa6.5□□□□□ -1.37
TM4SF1-203ENST00000493298 ERVFC1-1P60608 527 aa6.5□□□□□ -1.37
TM4SF1-203ENST00000493298 STHQ8IWL8 128 aa6.5□□□□□ -1.37
TM4SF1-203ENST00000493298 NUP35Q8NFH5 326 aa6.5□□□□□ -1.37
TM4SF1-203ENST00000493298 IL17DQ8TAD2 202 aa6.5□□□□□ -1.37
TM4SF1-203ENST00000493298 NEU1Q99519 415 aa6.5□□□□□ -1.37
TM4SF1-203ENST00000493298 LINC00467Q9BRT7 94 aa6.5□□□□□ -1.37
TM4SF1-203ENST00000493298 RPP21Q9H633 154 aaKnown RBP6.5□□□□□ -1.37
TM4SF1-203ENST00000493298 TUBA4BQ9H853 241 aa6.5□□□□□ -1.37
TM4SF1-203ENST00000493298 IL36BQ9NZH7 164 aa6.5□□□□□ -1.37
TM4SF1-203ENST00000493298 X6R8D5 127 aa6.5□□□□□ -1.37
TM4SF1-203ENST00000493298 TGIF2-C20orf24A0A0A6YYL0 155 aa6.49□□□□□ -1.37
TM4SF1-203ENST00000493298 TRAV21A0A0B4J279 112 aa6.49□□□□□ -1.37
TM4SF1-203ENST00000493298 MUC21A0A0G2JKD1 596 aa6.49□□□□□ -1.37
TM4SF1-203ENST00000493298 MUC21A0A140T8X8 626 aa6.49□□□□□ -1.37
TM4SF1-203ENST00000493298 A0A1B0GXF2 115 aa6.49□□□□□ -1.37
TM4SF1-203ENST00000493298 TCL1AP56279 114 aa6.49□□□□□ -1.37
TM4SF1-203ENST00000493298 CT83Q5H943 113 aa6.49□□□□□ -1.37
TM4SF1-203ENST00000493298 OR2D3Q8NGH3 330 aa6.49□□□□□ -1.37
TM4SF1-203ENST00000493298 TSKUQ8WUA8 353 aa6.49□□□□□ -1.37
TM4SF1-203ENST00000493298 ANAPC16Q96DE5 110 aa6.49□□□□□ -1.37
TM4SF1-203ENST00000493298 C9orf85Q96MD7 179 aa6.49□□□□□ -1.37
TM4SF1-203ENST00000493298 CTDSP1Q9GZU7 261 aa6.49□□□□□ -1.37
TM4SF1-203ENST00000493298 MSRB1Q9NZV6 116 aa6.49□□□□□ -1.37
TM4SF1-203ENST00000493298 LCE6AA0A183 80 aa6.48□□□□□ -1.37
TM4SF1-203ENST00000493298 ZNF705GA8MUZ8 300 aaPredicted RBP6.48□□□□□ -1.37
TM4SF1-203ENST00000493298 H7BYZ3 331 aa6.48□□□□□ -1.37
TM4SF1-203ENST00000493298 SNAI2O43623 268 aa6.48□□□□□ -1.37
TM4SF1-203ENST00000493298 P01737 135 aa6.48□□□□□ -1.37
TM4SF1-203ENST00000493298 MT-ND4LP03901 98 aa6.48□□□□□ -1.37
TM4SF1-203ENST00000493298 ZFAND6Q6FIF0 208 aa6.48□□□□□ -1.37
TM4SF1-203ENST00000493298 CNFNQ9BYD5 112 aa6.48□□□□□ -1.37
TM4SF1-203ENST00000493298 CSTL1Q9H114 145 aa6.48□□□□□ -1.37
TM4SF1-203ENST00000493298 IGHV1OR15-1A0A075B7D0 117 aa6.47□□□□□ -1.37
TM4SF1-203ENST00000493298 LOC102724200A0A096LPH7 203 aaPredicted RBP6.47□□□□□ -1.37
TM4SF1-203ENST00000493298 KIR2DL5BA0A0G2JN68 375 aa6.47□□□□□ -1.37
TM4SF1-203ENST00000493298 KIR2DL5BA0A0G2JPC4 375 aa6.47□□□□□ -1.37
TM4SF1-203ENST00000493298 TMEM189A5PLL7 270 aa6.47□□□□□ -1.37
TM4SF1-203ENST00000493298 NXPH4O95158 308 aa6.47□□□□□ -1.37
TM4SF1-203ENST00000493298 ORM1P02763 201 aa6.47□□□□□ -1.37
TM4SF1-203ENST00000493298 ARMS2P0C7Q2 107 aa6.47□□□□□ -1.37
TM4SF1-203ENST00000493298 TSPOP30536 169 aa6.47□□□□□ -1.37
TM4SF1-203ENST00000493298 CTRLP40313 264 aa6.47□□□□□ -1.37
TM4SF1-203ENST00000493298 LINC00315P59091 139 aa6.47□□□□□ -1.37
TM4SF1-203ENST00000493298 MORN3Q6PF18 240 aaPredicted RBP6.47□□□□□ -1.37
TM4SF1-203ENST00000493298 LYZL1Q6UWQ5 148 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms