RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 OCM2P0CE71 109 aa1.86□□□□□ -2.11
UBR4-215ENST00000492606 OCMP0CE72 109 aaPredicted RBP1.86□□□□□ -2.11
UBR4-215ENST00000492606 IDO1P14902 403 aa1.86□□□□□ -2.11
UBR4-215ENST00000492606 TAS2R31P59538 309 aa1.86□□□□□ -2.11
UBR4-215ENST00000492606 CTAG1AP78358 180 aa1.86□□□□□ -2.11
UBR4-215ENST00000492606 BTN1A1Q13410 526 aa1.86□□□□□ -2.11
UBR4-215ENST00000492606 TNFAIP8L3Q5GJ75 292 aa1.86□□□□□ -2.11
UBR4-215ENST00000492606 FAM19A1Q7Z5A9 133 aa1.86□□□□□ -2.11
UBR4-215ENST00000492606 CENPNQ96H22 339 aaPredicted RBP1.86□□□□□ -2.11
UBR4-215ENST00000492606 C20orf144Q9BQM9 153 aa1.86□□□□□ -2.11
UBR4-215ENST00000492606 NDFIP1Q9BT67 221 aa1.86□□□□□ -2.11
UBR4-215ENST00000492606 ARV1Q9H2C2 271 aa1.86□□□□□ -2.11
UBR4-215ENST00000492606 ABRACLQ9P1F3 81 aa1.86□□□□□ -2.11
UBR4-215ENST00000492606 TMEM14AQ9Y6G1 99 aa1.86□□□□□ -2.11
UBR4-215ENST00000492606 SULT1C2O00338 296 aa1.85□□□□□ -2.11
UBR4-215ENST00000492606 KRTAP5-8O75690 187 aa1.85□□□□□ -2.11
UBR4-215ENST00000492606 OR10J4P0C629 311 aa1.85□□□□□ -2.11
UBR4-215ENST00000492606 MYL9P24844 172 aa1.85□□□□□ -2.11
UBR4-215ENST00000492606 OPRK1P41145 380 aa1.85□□□□□ -2.11
UBR4-215ENST00000492606 GALR1P47211 349 aa1.85□□□□□ -2.11
UBR4-215ENST00000492606 TCL1AP56279 114 aa1.85□□□□□ -2.11
UBR4-215ENST00000492606 RHOBP62745 196 aa1.85□□□□□ -2.11
UBR4-215ENST00000492606 RPL30P62888 115 aaKnown RBP1.85□□□□□ -2.11
UBR4-215ENST00000492606 Q0VG73 95 aa1.85□□□□□ -2.11
UBR4-215ENST00000492606 EIF4EBP1Q13541 118 aaPredicted RBP1.85□□□□□ -2.11
UBR4-215ENST00000492606 ATP6V1FQ16864 119 aa1.85□□□□□ -2.11
UBR4-215ENST00000492606 C6orf99Q4VX62 202 aa1.85□□□□□ -2.11
UBR4-215ENST00000492606 SAMD13Q5VXD3 122 aa1.85□□□□□ -2.11
UBR4-215ENST00000492606 SYS1Q8N2H4 156 aa1.85□□□□□ -2.11
UBR4-215ENST00000492606 SIKE1Q9BRV8 207 aa1.85□□□□□ -2.11
UBR4-215ENST00000492606 PRRG3Q9BZD7 231 aa1.85□□□□□ -2.11
UBR4-215ENST00000492606 FLVCR2Q9UPI3 526 aa1.85□□□□□ -2.11
UBR4-215ENST00000492606 RBMX2Q9Y388 322 aaKnown RBP1.85□□□□□ -2.11
UBR4-215ENST00000492606 TEX50A0A1B0GTY4 177 aa1.84□□□□□ -2.11
UBR4-215ENST00000492606 ANKRD20A5PA0PJZ0 165 aa1.84□□□□□ -2.11
UBR4-215ENST00000492606 PSPHP1O15172 72 aa1.84□□□□□ -2.11
UBR4-215ENST00000492606 GCGP01275 180 aa1.84□□□□□ -2.11
UBR4-215ENST00000492606 IGKV1-17P01599 117 aa1.84□□□□□ -2.11
UBR4-215ENST00000492606 S100A9P06702 114 aaKnown RBP1.84□□□□□ -2.11
UBR4-215ENST00000492606 MT1BP07438 61 aa1.84□□□□□ -2.11
UBR4-215ENST00000492606 MRPL3P09001 348 aaKnown RBP1.84□□□□□ -2.11
UBR4-215ENST00000492606 TRAPPC2P0DI81 140 aa1.84□□□□□ -2.11
UBR4-215ENST00000492606 TRAPPC2BP0DI82 140 aa1.84□□□□□ -2.11
UBR4-215ENST00000492606 CXCR4P61073 352 aa1.84□□□□□ -2.11
UBR4-215ENST00000492606 TMPRSS11AQ6ZMR5 421 aa1.84□□□□□ -2.11
UBR4-215ENST00000492606 LGI3Q8N145 548 aa1.84□□□□□ -2.11
UBR4-215ENST00000492606 DYDC1Q8WWB3 177 aa1.84□□□□□ -2.11
UBR4-215ENST00000492606 YIPF3Q9GZM5 350 aa1.84□□□□□ -2.11
UBR4-215ENST00000492606 LINC00474Q9P2X8 69 aa1.84□□□□□ -2.11
UBR4-215ENST00000492606 UBE2D4Q9Y2X8 147 aa1.84□□□□□ -2.11
UBR4-215ENST00000492606 TRAV8-2A0A0B4J237 113 aa1.83□□□□□ -2.12
UBR4-215ENST00000492606 TRAV12-3A0A0B4J271 114 aa1.83□□□□□ -2.12
UBR4-215ENST00000492606 UPK2O00526 184 aa1.83□□□□□ -2.12
UBR4-215ENST00000492606 NUP62P37198 522 aaPredicted RBP1.83□□□□□ -2.12
UBR4-215ENST00000492606 TALDO1P37837 337 aa1.83□□□□□ -2.12
UBR4-215ENST00000492606 NUDT2P50583 147 aa1.83□□□□□ -2.12
UBR4-215ENST00000492606 POLR2GP62487 172 aaKnown RBP eCLIP1.83□□□□□ -2.12
UBR4-215ENST00000492606 SELENOWP63302 87 aa1.83□□□□□ -2.12
UBR4-215ENST00000492606 HIST1H1AQ02539 215 aaPredicted RBP1.83□□□□□ -2.12
UBR4-215ENST00000492606 ST3GAL4Q11206 333 aa1.83□□□□□ -2.12
UBR4-215ENST00000492606 TAL2Q16559 108 aa1.83□□□□□ -2.12
UBR4-215ENST00000492606 C5orf47Q569G3 176 aa1.83□□□□□ -2.12
UBR4-215ENST00000492606 ZFP1Q6P2D0 407 aa1.83□□□□□ -2.12
UBR4-215ENST00000492606 FUNDC1Q8IVP5 155 aa1.83□□□□□ -2.12
UBR4-215ENST00000492606 RNF182Q8N6D2 247 aa1.83□□□□□ -2.12
UBR4-215ENST00000492606 OR51A4Q8NGJ6 313 aa1.83□□□□□ -2.12
UBR4-215ENST00000492606 OR1P1Q8NH06 330 aa1.83□□□□□ -2.12
UBR4-215ENST00000492606 OR10A6Q8NH74 314 aa1.83□□□□□ -2.12
UBR4-215ENST00000492606 ADTRPQ96IZ2 230 aa1.83□□□□□ -2.12
UBR4-215ENST00000492606 TSSK6Q9BXA6 273 aa1.83□□□□□ -2.12
UBR4-215ENST00000492606 C20orf27Q9GZN8 174 aa1.83□□□□□ -2.12
UBR4-215ENST00000492606 COMMD5Q9GZQ3 224 aa1.83□□□□□ -2.12
UBR4-215ENST00000492606 TMEM222Q9H0R3 208 aa1.83□□□□□ -2.12
UBR4-215ENST00000492606 SPACA1Q9HBV2 294 aa1.83□□□□□ -2.12
UBR4-215ENST00000492606 NDUFA4L2Q9NRX3 87 aa1.83□□□□□ -2.12
UBR4-215ENST00000492606 BET1LQ9NYM9 111 aa1.83□□□□□ -2.12
UBR4-215ENST00000492606 IL20Q9NYY1 176 aa1.83□□□□□ -2.12
UBR4-215ENST00000492606 V9GYY9 64 aa1.83□□□□□ -2.12
UBR4-215ENST00000492606 IGHV6-1A0A0B4J1U7 121 aa1.82□□□□□ -2.12
UBR4-215ENST00000492606 LOC100506127A0A0U1RQW1 187 aa1.82□□□□□ -2.12
UBR4-215ENST00000492606 RIIAD1A6NNX1 92 aa1.82□□□□□ -2.12
UBR4-215ENST00000492606 COLCA2A8K830 154 aa1.82□□□□□ -2.12
UBR4-215ENST00000492606 SEC11BP0C7V7 166 aa1.82□□□□□ -2.12
UBR4-215ENST00000492606 TSPAN31Q12999 210 aa1.82□□□□□ -2.12
UBR4-215ENST00000492606 ZNF680Q8NEM1 530 aa1.82□□□□□ -2.12
UBR4-215ENST00000492606 OR10P1Q8NGE3 313 aa1.82□□□□□ -2.12
UBR4-215ENST00000492606 OR51A2Q8NGJ7 313 aa1.82□□□□□ -2.12
UBR4-215ENST00000492606 LINC00477Q96M19 166 aa1.82□□□□□ -2.12
UBR4-215ENST00000492606 C20orf166-AS1Q96NR2 134 aa1.82□□□□□ -2.12
UBR4-215ENST00000492606 GPER1Q99527 375 aa1.82□□□□□ -2.12
UBR4-215ENST00000492606 SDHCQ99643 169 aaPredicted RBP1.82□□□□□ -2.12
UBR4-215ENST00000492606 METTL9Q9H1A3 318 aa1.82□□□□□ -2.12
UBR4-215ENST00000492606 HRASLSQ9HDD0 168 aa1.82□□□□□ -2.12
UBR4-215ENST00000492606 CMC2Q9NRP2 79 aa1.82□□□□□ -2.12
UBR4-215ENST00000492606 SYNE1Q8NF91 8797 aaKnown RBP1.81□□□□□ -2.12
UBR4-215ENST00000492606 TRAV8-7A0A075B6U6 113 aa1.81□□□□□ -2.12
UBR4-215ENST00000492606 FAM24AA6NFZ4 105 aa1.81□□□□□ -2.12
UBR4-215ENST00000492606 OR4C45A6NMZ5 311 aa1.81□□□□□ -2.12
UBR4-215ENST00000492606 MED6O75586 246 aa1.81□□□□□ -2.12
UBR4-215ENST00000492606 IFNGP01579 166 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms