RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 TIRAPP58753 221 aa5.99□□□□□ -1.45
NUP50-217ENST00000491860 SERF2P84101 59 aa5.99□□□□□ -1.45
NUP50-217ENST00000491860 IFITM3Q01628 133 aa5.99□□□□□ -1.45
NUP50-217ENST00000491860 ZFP69Q49AA0 526 aa5.99□□□□□ -1.45
NUP50-217ENST00000491860 GOLT1AQ6ZVE7 132 aa5.99□□□□□ -1.45
NUP50-217ENST00000491860 OR10G9Q8NGN4 311 aa5.99□□□□□ -1.45
NUP50-217ENST00000491860 OR10G7Q8NGN6 311 aa5.99□□□□□ -1.45
NUP50-217ENST00000491860 OR2G3Q8NGZ4 309 aa5.99□□□□□ -1.45
NUP50-217ENST00000491860 PSMG3Q9BT73 122 aaPredicted RBP5.99□□□□□ -1.45
NUP50-217ENST00000491860 SMIM3Q9BZL3 60 aa5.99□□□□□ -1.45
NUP50-217ENST00000491860 TREM1Q9NP99 234 aa5.99□□□□□ -1.45
NUP50-217ENST00000491860 BATF3Q9NR55 127 aa5.99□□□□□ -1.45
NUP50-217ENST00000491860 MDFICQ9P1T7 246 aa5.99□□□□□ -1.45
NUP50-217ENST00000491860 NAGKQ9UJ70 344 aa5.99□□□□□ -1.45
NUP50-217ENST00000491860 TAAR5O14804 337 aa5.98□□□□□ -1.45
NUP50-217ENST00000491860 PFN1P07737 140 aaKnown RBP5.98□□□□□ -1.45
NUP50-217ENST00000491860 Q6ZRN7 208 aaPredicted RBP5.98□□□□□ -1.45
NUP50-217ENST00000491860 C5orf17Q8NAS9 161 aa5.98□□□□□ -1.45
NUP50-217ENST00000491860 ZNF479Q96JC4 524 aa5.98□□□□□ -1.45
NUP50-217ENST00000491860 TMEM167BQ9NRX6 74 aa5.98□□□□□ -1.45
NUP50-217ENST00000491860 MSRB1Q9NZV6 116 aa5.98□□□□□ -1.45
NUP50-217ENST00000491860 RPH3ALQ9UNE2 315 aa5.98□□□□□ -1.45
NUP50-217ENST00000491860 IGHV3-16A0A0C4DH30 117 aa5.97□□□□□ -1.45
NUP50-217ENST00000491860 CXorf1O96002 111 aa5.97□□□□□ -1.45
NUP50-217ENST00000491860 STAG3L2P0CL84 134 aa5.97□□□□□ -1.45
NUP50-217ENST00000491860 STAG3L3P0CL85 134 aa5.97□□□□□ -1.45
NUP50-217ENST00000491860 DNAH10OSP0CZ25 163 aa5.97□□□□□ -1.45
NUP50-217ENST00000491860 PPT1P50897 306 aa5.97□□□□□ -1.45
NUP50-217ENST00000491860 SAPCD1Q5SSQ6 148 aa5.97□□□□□ -1.45
NUP50-217ENST00000491860 Q6ZQT7 251 aa5.97□□□□□ -1.45
NUP50-217ENST00000491860 PTH2Q96A98 100 aa5.97□□□□□ -1.45
NUP50-217ENST00000491860 AQP10Q96PS8 301 aa5.97□□□□□ -1.45
NUP50-217ENST00000491860 PRADC1Q9BSG0 188 aa5.97□□□□□ -1.45
NUP50-217ENST00000491860 TRAV8-6A0A0B4J262 113 aa5.96□□□□□ -1.46
NUP50-217ENST00000491860 PTTG1O95997 202 aa5.96□□□□□ -1.46
NUP50-217ENST00000491860 TCRAP04437 139 aa5.96□□□□□ -1.46
NUP50-217ENST00000491860 TYMSP04818 313 aa5.96□□□□□ -1.46
NUP50-217ENST00000491860 SFTA3P0C7M3 94 aa5.96□□□□□ -1.46
NUP50-217ENST00000491860 ARL14EPLP0DKL9 152 aa5.96□□□□□ -1.46
NUP50-217ENST00000491860 KRTAP10-2P60368 255 aa5.96□□□□□ -1.46
NUP50-217ENST00000491860 RAB2AP61019 212 aa5.96□□□□□ -1.46
NUP50-217ENST00000491860 RHOHQ15669 191 aa5.96□□□□□ -1.46
NUP50-217ENST00000491860 ZNF876PQ49A33 203 aa5.96□□□□□ -1.46
NUP50-217ENST00000491860 SMUG1Q53HV7 270 aa5.96□□□□□ -1.46
NUP50-217ENST00000491860 TMEM75Q8N9X5 138 aa5.96□□□□□ -1.46
NUP50-217ENST00000491860 NHLRC2Q8NBF2 726 aa5.96□□□□□ -1.46
NUP50-217ENST00000491860 INO80EQ8NBZ0 244 aaPredicted RBP5.96□□□□□ -1.46
NUP50-217ENST00000491860 SUN5Q8TC36 379 aa5.96□□□□□ -1.46
NUP50-217ENST00000491860 RAB24Q969Q5 203 aa5.96□□□□□ -1.46
NUP50-217ENST00000491860 NKX6-2Q9C056 277 aaPredicted RBP5.96□□□□□ -1.46
NUP50-217ENST00000491860 ACTR3CQ9C0K3 210 aaPredicted RBP5.96□□□□□ -1.46
NUP50-217ENST00000491860 WFDC1Q9HC57 220 aa5.96□□□□□ -1.46
NUP50-217ENST00000491860 SCRT2Q9NQ03 307 aa5.96□□□□□ -1.46
NUP50-217ENST00000491860 TNFSF18Q9UNG2 199 aa5.96□□□□□ -1.46
NUP50-217ENST00000491860 BORCS7-ASMTA0A0B4J1R7 106 aa5.95□□□□□ -1.46
NUP50-217ENST00000491860 TRBV6-4A0A1B0GX49 114 aa5.95□□□□□ -1.46
NUP50-217ENST00000491860 A0A1W2PRE2 83 aa5.95□□□□□ -1.46
NUP50-217ENST00000491860 F6UZH7 168 aa5.95□□□□□ -1.46
NUP50-217ENST00000491860 GNRH2O43555 120 aa5.95□□□□□ -1.46
NUP50-217ENST00000491860 CRYGDP07320 174 aa5.95□□□□□ -1.46
NUP50-217ENST00000491860 MGST1P10620 155 aaKnown RBP5.95□□□□□ -1.46
NUP50-217ENST00000491860 GATA1P15976 413 aaPredicted RBP5.95□□□□□ -1.46
NUP50-217ENST00000491860 GCHFRP30047 84 aa5.95□□□□□ -1.46
NUP50-217ENST00000491860 PIK3CD-AS1Q5SR53 167 aa5.95□□□□□ -1.46
NUP50-217ENST00000491860 CYB561D1Q8N8Q1 229 aa5.95□□□□□ -1.46
NUP50-217ENST00000491860 HSD17B11Q8NBQ5 300 aa5.95□□□□□ -1.46
NUP50-217ENST00000491860 MED28Q9H204 178 aa5.95□□□□□ -1.46
NUP50-217ENST00000491860 ALG5Q9Y673 324 aa5.95□□□□□ -1.46
NUP50-217ENST00000491860 A0A087WTM6 91 aa5.94□□□□□ -1.46
NUP50-217ENST00000491860 TRAV8-1A0A0A6YYK1 113 aa5.94□□□□□ -1.46
NUP50-217ENST00000491860 IGHV3-38A0A0C4DH36 116 aa5.94□□□□□ -1.46
NUP50-217ENST00000491860 RS1O15537 224 aa5.94□□□□□ -1.46
NUP50-217ENST00000491860 PSCAO43653 123 aa5.94□□□□□ -1.46
NUP50-217ENST00000491860 ATP6V0CP27449 155 aa5.94□□□□□ -1.46
NUP50-217ENST00000491860 SUMO1P63165 101 aaKnown RBP5.94□□□□□ -1.46
NUP50-217ENST00000491860 FLI1Q01543 452 aaPredicted RBP5.94□□□□□ -1.46
NUP50-217ENST00000491860 LINC01556Q5JQF7 62 aa5.94□□□□□ -1.46
NUP50-217ENST00000491860 WFDC10BQ8IUB3 73 aa5.94□□□□□ -1.46
NUP50-217ENST00000491860 NTN5Q8WTR8 489 aaPredicted RBP5.94□□□□□ -1.46
NUP50-217ENST00000491860 EPDR1Q9UM22 224 aa5.94□□□□□ -1.46
NUP50-217ENST00000491860 PSG8Q9UQ74 426 aa5.94□□□□□ -1.46
NUP50-217ENST00000491860 DMBT1Q9UGM3 2413 aaPredicted RBP5.94□□□□□ -1.46
NUP50-217ENST00000491860 A8MWV9 139 aa5.93□□□□□ -1.46
NUP50-217ENST00000491860 EPM2AB3EWF7 344 aa5.93□□□□□ -1.46
NUP50-217ENST00000491860 GCGP01275 180 aa5.93□□□□□ -1.46
NUP50-217ENST00000491860 GIPP09681 153 aaPredicted RBP5.93□□□□□ -1.46
NUP50-217ENST00000491860 GNG5P63218 68 aa5.93□□□□□ -1.46
NUP50-217ENST00000491860 LAGE3Q14657 143 aa5.93□□□□□ -1.46
NUP50-217ENST00000491860 OR10J3Q5JRS4 329 aa5.93□□□□□ -1.46
NUP50-217ENST00000491860 CFAP126Q5VTH2 177 aa5.93□□□□□ -1.46
NUP50-217ENST00000491860 ZFP2Q6ZN57 461 aa5.93□□□□□ -1.46
NUP50-217ENST00000491860 HIST1H2BAQ96A08 127 aa5.93□□□□□ -1.46
NUP50-217ENST00000491860 TVP23CQ96ET8 276 aa5.93□□□□□ -1.46
NUP50-217ENST00000491860 TCEAL7Q9BRU2 100 aa5.93□□□□□ -1.46
NUP50-217ENST00000491860 CTXND1A0A1B0GTU2 59 aa5.92□□□□□ -1.46
NUP50-217ENST00000491860 FABP5P3A8MUU1 101 aa5.92□□□□□ -1.46
NUP50-217ENST00000491860 HMGB3O15347 200 aaKnown RBP5.92□□□□□ -1.46
NUP50-217ENST00000491860 SEC11BP0C7V7 166 aa5.92□□□□□ -1.46
NUP50-217ENST00000491860 S100A4P26447 101 aaKnown RBP5.92□□□□□ -1.46
NUP50-217ENST00000491860 TOR2AQ5JU69 321 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms