RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 NOTCH3Q9UM47 2321 aa7.15□□□□□ -1.26
BRCA1-219ENST00000491747 TRAV8-1A0A0A6YYK1 113 aa7.15□□□□□ -1.26
BRCA1-219ENST00000491747 MUC21A0A0G2JKD1 596 aa7.15□□□□□ -1.26
BRCA1-219ENST00000491747 TRBV6-1A0A0K0K1D8 114 aa7.15□□□□□ -1.26
BRCA1-219ENST00000491747 MUC21A0A140T8X8 626 aa7.15□□□□□ -1.26
BRCA1-219ENST00000491747 A0A1B0GW15 77 aa7.15□□□□□ -1.26
BRCA1-219ENST00000491747 WIPF1O43516 503 aa7.15□□□□□ -1.26
BRCA1-219ENST00000491747 LYZP61626 148 aa7.15□□□□□ -1.26
BRCA1-219ENST00000491747 MUC21Q5SSG8 566 aa7.15□□□□□ -1.26
BRCA1-219ENST00000491747 GOLT1AQ6ZVE7 132 aa7.15□□□□□ -1.26
BRCA1-219ENST00000491747 RNF24Q9Y225 148 aa7.15□□□□□ -1.26
BRCA1-219ENST00000491747 LINC01619G3V211 115 aa7.15□□□□□ -1.27
BRCA1-219ENST00000491747 H0Y8G0 127 aa7.15□□□□□ -1.27
BRCA1-219ENST00000491747 K7EQM0 130 aa7.15□□□□□ -1.27
BRCA1-219ENST00000491747 CSN3P07498 182 aa7.15□□□□□ -1.27
BRCA1-219ENST00000491747 ZNF138P52744 262 aa7.15□□□□□ -1.27
BRCA1-219ENST00000491747 Q6AWC8 147 aa7.15□□□□□ -1.27
BRCA1-219ENST00000491747 C16orf54Q6UWD8 224 aa7.15□□□□□ -1.27
BRCA1-219ENST00000491747 DPF1Q92782 380 aa7.15□□□□□ -1.27
BRCA1-219ENST00000491747 SLC25A39Q9BZJ4 359 aaPredicted RBP7.15□□□□□ -1.27
BRCA1-219ENST00000491747 F11RQ9Y624 299 aaKnown RBP7.15□□□□□ -1.27
BRCA1-219ENST00000491747 IGHV3-21A0A0B4J1V1 117 aa7.14□□□□□ -1.27
BRCA1-219ENST00000491747 A0A0G2JLM5 398 aa7.14□□□□□ -1.27
BRCA1-219ENST00000491747 OR2T8A6NH00 312 aa7.14□□□□□ -1.27
BRCA1-219ENST00000491747 IGLV2-11P01706 119 aa7.14□□□□□ -1.27
BRCA1-219ENST00000491747 PPBPP02775 128 aa7.14□□□□□ -1.27
BRCA1-219ENST00000491747 PSG1P11464 419 aa7.14□□□□□ -1.27
BRCA1-219ENST00000491747 GPR183P32249 361 aa7.14□□□□□ -1.27
BRCA1-219ENST00000491747 KLK9Q2XQG4 91 aa7.14□□□□□ -1.27
BRCA1-219ENST00000491747 FA2HQ7L5A8 372 aa7.14□□□□□ -1.27
BRCA1-219ENST00000491747 OR10AG1Q8NH19 301 aa7.14□□□□□ -1.27
BRCA1-219ENST00000491747 KLK9Q9UKQ9 250 aa7.14□□□□□ -1.27
BRCA1-219ENST00000491747 S4R3C0 116 aa7.14□□□□□ -1.27
BRCA1-219ENST00000491747 IGLC1P0CG04 106 aa7.13□□□□□ -1.27
BRCA1-219ENST00000491747 COX8AP10176 69 aa7.13□□□□□ -1.27
BRCA1-219ENST00000491747 RNF151Q2KHN1 245 aa7.13□□□□□ -1.27
BRCA1-219ENST00000491747 EXOC3-AS1Q8N2X6 119 aa7.13□□□□□ -1.27
BRCA1-219ENST00000491747 TMEM75Q8N9X5 138 aa7.13□□□□□ -1.27
BRCA1-219ENST00000491747 GATD1Q8NB37 220 aa7.13□□□□□ -1.27
BRCA1-219ENST00000491747 PRSS3P2Q8NHM4 247 aa7.13□□□□□ -1.27
BRCA1-219ENST00000491747 USMG5Q96IX5 58 aa7.13□□□□□ -1.27
BRCA1-219ENST00000491747 CST9LQ9H4G1 147 aa7.13□□□□□ -1.27
BRCA1-219ENST00000491747 PEF1Q9UBV8 284 aaKnown RBP7.13□□□□□ -1.27
BRCA1-219ENST00000491747 TIMM8BQ9Y5J9 83 aaPredicted RBP7.13□□□□□ -1.27
BRCA1-219ENST00000491747 PRKDCP78527 4128 aaKnown RBP7.13□□□□□ -1.27
BRCA1-219ENST00000491747 IGLV11-55A0A075B6I3 123 aa7.13□□□□□ -1.27
BRCA1-219ENST00000491747 A0A087X0K7 114 aa7.13□□□□□ -1.27
BRCA1-219ENST00000491747 FAM223BA6NKX1 122 aa7.13□□□□□ -1.27
BRCA1-219ENST00000491747 IGHV3-23P01764 117 aa7.13□□□□□ -1.27
BRCA1-219ENST00000491747 ARMS2P0C7Q2 107 aa7.13□□□□□ -1.27
BRCA1-219ENST00000491747 ATP5G2Q06055 141 aa7.13□□□□□ -1.27
BRCA1-219ENST00000491747 EGFEM1PQ0D2K5 195 aa7.13□□□□□ -1.27
BRCA1-219ENST00000491747 C15orf32Q32M92 178 aa7.13□□□□□ -1.27
BRCA1-219ENST00000491747 BPIFA4PQ86YQ2 179 aa7.13□□□□□ -1.27
BRCA1-219ENST00000491747 FAM223AQ8IWN6 122 aa7.13□□□□□ -1.27
BRCA1-219ENST00000491747 CBY3A6NI87 242 aa7.12□□□□□ -1.27
BRCA1-219ENST00000491747 OVOL1O14753 267 aa7.12□□□□□ -1.27
BRCA1-219ENST00000491747 SEC11AP67812 179 aa7.12□□□□□ -1.27
BRCA1-219ENST00000491747 OCIAD2Q56VL3 154 aa7.12□□□□□ -1.27
BRCA1-219ENST00000491747 AMMECR1LQ6DCA0 310 aa7.12□□□□□ -1.27
BRCA1-219ENST00000491747 ERASQ7Z444 233 aa7.12□□□□□ -1.27
BRCA1-219ENST00000491747 LYPD1Q8N2G4 141 aa7.12□□□□□ -1.27
BRCA1-219ENST00000491747 ZC2HC1AQ96GY0 325 aa7.12□□□□□ -1.27
BRCA1-219ENST00000491747 MCRIP2Q9BUT9 160 aaKnown RBP7.12□□□□□ -1.27
BRCA1-219ENST00000491747 TRBV19A0A075B6N1 114 aa7.12□□□□□ -1.27
BRCA1-219ENST00000491747 CCDC140Q96MF4 163 aa7.12□□□□□ -1.27
BRCA1-219ENST00000491747 SRSF8Q9BRL6 282 aaKnown RBP7.12□□□□□ -1.27
BRCA1-219ENST00000491747 CT45A10P0DMU9 189 aa7.11□□□□□ -1.27
BRCA1-219ENST00000491747 PSG9Q00887 426 aa7.11□□□□□ -1.27
BRCA1-219ENST00000491747 C9orf66Q5T8R8 295 aa7.11□□□□□ -1.27
BRCA1-219ENST00000491747 SMIM15Q7Z3B0 74 aa7.11□□□□□ -1.27
BRCA1-219ENST00000491747 VPS25Q9BRG1 176 aa7.11□□□□□ -1.27
BRCA1-219ENST00000491747 PSG8Q9UQ74 426 aa7.11□□□□□ -1.27
BRCA1-219ENST00000491747 WI2-2373I1.2A0A1W2PRP0 233 aa7.11□□□□□ -1.27
BRCA1-219ENST00000491747 GAGE12BA1L429 117 aa7.11□□□□□ -1.27
BRCA1-219ENST00000491747 I3L2K1 104 aa7.11□□□□□ -1.27
BRCA1-219ENST00000491747 K7ERU9 68 aa7.11□□□□□ -1.27
BRCA1-219ENST00000491747 PSG3Q16557 428 aa7.11□□□□□ -1.27
BRCA1-219ENST00000491747 SHANK2-AS3Q9BTD1 123 aa7.11□□□□□ -1.27
BRCA1-219ENST00000491747 C7orf71A4D174 169 aa7.1□□□□□ -1.27
BRCA1-219ENST00000491747 CLEC19AQ6UXS0 136 aa7.1□□□□□ -1.27
BRCA1-219ENST00000491747 ZNF493Q6ZR52 646 aa7.1□□□□□ -1.27
BRCA1-219ENST00000491747 C2orf91Q6ZV80 131 aa7.1□□□□□ -1.27
BRCA1-219ENST00000491747 S100A7AQ86SG5 101 aa7.1□□□□□ -1.27
BRCA1-219ENST00000491747 TPPP3Q9BW30 176 aa7.1□□□□□ -1.27
BRCA1-219ENST00000491747 ZNF785A8K8V0 405 aa7.1□□□□□ -1.27
BRCA1-219ENST00000491747 K7EIL1 84 aa7.1□□□□□ -1.27
BRCA1-219ENST00000491747 IGKV1-17P01599 117 aa7.1□□□□□ -1.27
BRCA1-219ENST00000491747 SYNJ2BPP57105 145 aa7.1□□□□□ -1.27
BRCA1-219ENST00000491747 TMEM97Q5BJF2 176 aa7.1□□□□□ -1.27
BRCA1-219ENST00000491747 SIGLEC15Q6ZMC9 328 aa7.1□□□□□ -1.27
BRCA1-219ENST00000491747 AP1S3Q96PC3 154 aa7.1□□□□□ -1.27
BRCA1-219ENST00000491747 TRAV8-6A0A0B4J262 113 aa7.09□□□□□ -1.27
BRCA1-219ENST00000491747 A6NDN8 102 aa7.09□□□□□ -1.27
BRCA1-219ENST00000491747 H3BRN7 92 aa7.09□□□□□ -1.27
BRCA1-219ENST00000491747 SAP30O75446 220 aa7.09□□□□□ -1.27
BRCA1-219ENST00000491747 ORMDL3Q8N138 153 aa7.09□□□□□ -1.27
BRCA1-219ENST00000491747 OR8A1Q8NGG7 326 aa7.09□□□□□ -1.27
BRCA1-219ENST00000491747 AAMDCQ9H7C9 122 aa7.09□□□□□ -1.27
BRCA1-219ENST00000491747 SERTM2A0A1B0GWG4 89 aa7.09□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms