RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 IFNA7P01567 189 aa12.08□□□□□ -0.48
SEC13-218ENST00000490283 PPT1P50897 306 aa12.08□□□□□ -0.48
SEC13-218ENST00000490283 FLI1Q01543 452 aaPredicted RBP12.08□□□□□ -0.48
SEC13-218ENST00000490283 MRPL23Q16540 153 aaKnown RBP12.08□□□□□ -0.48
SEC13-218ENST00000490283 TMEM75Q8N9X5 138 aa12.08□□□□□ -0.48
SEC13-218ENST00000490283 PCNPQ8WW12 178 aaKnown RBP12.08□□□□□ -0.48
SEC13-218ENST00000490283 BOLA1Q9Y3E2 137 aa12.08□□□□□ -0.48
SEC13-218ENST00000490283 IGHV3-16A0A0C4DH30 117 aa12.07□□□□□ -0.48
SEC13-218ENST00000490283 GNRH2O43555 120 aa12.07□□□□□ -0.48
SEC13-218ENST00000490283 TYMSP04818 313 aa12.07□□□□□ -0.48
SEC13-218ENST00000490283 CRYBA4P53673 196 aa12.07□□□□□ -0.48
SEC13-218ENST00000490283 FHL2Q14192 279 aa12.07□□□□□ -0.48
SEC13-218ENST00000490283 SMUG1Q53HV7 270 aa12.07□□□□□ -0.48
SEC13-218ENST00000490283 SAPCD1Q5SSQ6 148 aa12.07□□□□□ -0.48
SEC13-218ENST00000490283 PRNTQ86SH4 94 aa12.07□□□□□ -0.48
SEC13-218ENST00000490283 NKX6-2Q9C056 277 aaPredicted RBP12.07□□□□□ -0.48
SEC13-218ENST00000490283 TRAV4A0A0B4J268 109 aa12.06□□□□□ -0.48
SEC13-218ENST00000490283 A0A1W2PPQ1 181 aa12.06□□□□□ -0.48
SEC13-218ENST00000490283 G3V3Q6 166 aa12.06□□□□□ -0.48
SEC13-218ENST00000490283 GCGP01275 180 aa12.06□□□□□ -0.48
SEC13-218ENST00000490283 SFTA3P0C7M3 94 aa12.06□□□□□ -0.48
SEC13-218ENST00000490283 OR4C5Q8NGB2 326 aa12.06□□□□□ -0.48
SEC13-218ENST00000490283 ORM1P02763 201 aa12.05□□□□□ -0.48
SEC13-218ENST00000490283 PFN1P07737 140 aaKnown RBP12.05□□□□□ -0.48
SEC13-218ENST00000490283 UBE2G2P60604 165 aa12.05□□□□□ -0.48
SEC13-218ENST00000490283 ZNF726P1Q15940 193 aa12.05□□□□□ -0.48
SEC13-218ENST00000490283 STOML3Q8TAV4 291 aa12.05□□□□□ -0.48
SEC13-218ENST00000490283 ZNF479Q96JC4 524 aa12.05□□□□□ -0.48
SEC13-218ENST00000490283 MUC4Q99102 2169 aa12.05□□□□□ -0.48
SEC13-218ENST00000490283 MAP1LC3B2A6NCE7 125 aa12.04□□□□□ -0.48
SEC13-218ENST00000490283 SMLR1H3BR10 107 aa12.04□□□□□ -0.48
SEC13-218ENST00000490283 SRIP30626 198 aa12.04□□□□□ -0.48
SEC13-218ENST00000490283 FGF8P55075 233 aaPredicted RBP12.04□□□□□ -0.48
SEC13-218ENST00000490283 NEGR1Q7Z3B1 354 aa12.04□□□□□ -0.48
SEC13-218ENST00000490283 MAP1LC3BQ9GZQ8 125 aa12.04□□□□□ -0.48
SEC13-218ENST00000490283 C9JCJ5 164 aa12.03□□□□□ -0.48
SEC13-218ENST00000490283 IGLV2-11P01706 119 aa12.03□□□□□ -0.48
SEC13-218ENST00000490283 ZNF345Q14585 488 aa12.03□□□□□ -0.48
SEC13-218ENST00000490283 HIST1H2BAQ96A08 127 aa12.03□□□□□ -0.48
SEC13-218ENST00000490283 CYTL1Q9NRR1 136 aa12.03□□□□□ -0.48
SEC13-218ENST00000490283 PEX7O00628 323 aa12.02□□□□□ -0.49
SEC13-218ENST00000490283 SIVA1O15304 175 aa12.02□□□□□ -0.49
SEC13-218ENST00000490283 NXPH4O95158 308 aa12.02□□□□□ -0.49
SEC13-218ENST00000490283 GYPEP15421 78 aa12.02□□□□□ -0.49
SEC13-218ENST00000490283 BTF3P20290 206 aaKnown RBP12.02□□□□□ -0.49
SEC13-218ENST00000490283 ZNF80P51504 273 aaPredicted RBP12.02□□□□□ -0.49
SEC13-218ENST00000490283 KCNRGQ8N5I3 272 aa12.02□□□□□ -0.49
SEC13-218ENST00000490283 TXNDC17Q9BRA2 123 aa12.02□□□□□ -0.49
SEC13-218ENST00000490283 A0A0D9SG52 128 aa12.01□□□□□ -0.49
SEC13-218ENST00000490283 KANTRA0A1W2PQU2 76 aa12.01□□□□□ -0.49
SEC13-218ENST00000490283 FAM74A7A6NL05 159 aa12.01□□□□□ -0.49
SEC13-218ENST00000490283 TNP2Q05952 138 aa12.01□□□□□ -0.49
SEC13-218ENST00000490283 ZNF876PQ49A33 203 aa12.01□□□□□ -0.49
SEC13-218ENST00000490283 ARL2-SNX15V9GYD0 113 aa12.01□□□□□ -0.49
SEC13-218ENST00000490283 DNAH2Q9P225 4427 aa12.01□□□□□ -0.49
SEC13-218ENST00000490283 FAT2Q9NYQ8 4349 aa12.01□□□□□ -0.49
SEC13-218ENST00000490283 TRAV34A0A0B4J273 112 aa12□□□□□ -0.49
SEC13-218ENST00000490283 HMSDA8MTL9 139 aa12□□□□□ -0.49
SEC13-218ENST00000490283 K7EQD1 137 aa12□□□□□ -0.49
SEC13-218ENST00000490283 CIDEAO60543 219 aa12□□□□□ -0.49
SEC13-218ENST00000490283 MED14OSP0DP75 135 aa12□□□□□ -0.49
SEC13-218ENST00000490283 S100A4P26447 101 aaKnown RBP12□□□□□ -0.49
SEC13-218ENST00000490283 UBE2G1P62253 170 aa12□□□□□ -0.49
SEC13-218ENST00000490283 EIF5AP63241 154 aaKnown RBP12□□□□□ -0.49
SEC13-218ENST00000490283 LYPD5Q6UWN5 251 aa12□□□□□ -0.49
SEC13-218ENST00000490283 SH2D6Q7Z4S9 175 aa12□□□□□ -0.49
SEC13-218ENST00000490283 LINC00479Q96M42 142 aa12□□□□□ -0.49
SEC13-218ENST00000490283 TCEAL7Q9BRU2 100 aa12□□□□□ -0.49
SEC13-218ENST00000490283 ZNF471Q9BX82 626 aaPredicted RBP12□□□□□ -0.49
SEC13-218ENST00000490283 FABP5P3A8MUU1 101 aa11.99□□□□□ -0.49
SEC13-218ENST00000490283 UMAD1C9J7I0 102 aa11.99□□□□□ -0.49
SEC13-218ENST00000490283 CST9LP1Q5W188 147 aa11.99□□□□□ -0.49
SEC13-218ENST00000490283 Q86TA4 180 aa11.99□□□□□ -0.49
SEC13-218ENST00000490283 KRTAP1-5Q9BYS1 174 aa11.99□□□□□ -0.49
SEC13-218ENST00000490283 C11orf21Q9P2W6 132 aa11.99□□□□□ -0.49
SEC13-218ENST00000490283 DNAH17Q9UFH2 4485 aa11.98□□□□□ -0.49
SEC13-218ENST00000490283 TRAV9-2A0A087WT02 112 aa11.98□□□□□ -0.49
SEC13-218ENST00000490283 SEC11BP0C7V7 166 aa11.98□□□□□ -0.49
SEC13-218ENST00000490283 NHLRC2Q8NBF2 726 aa11.98□□□□□ -0.49
SEC13-218ENST00000490283 FMC1Q96HJ9 113 aa11.98□□□□□ -0.49
SEC13-218ENST00000490283 ZFP30Q9Y2G7 519 aa11.98□□□□□ -0.49
SEC13-218ENST00000490283 BCL2L11O43521 198 aa11.97□□□□□ -0.49
SEC13-218ENST00000490283 PFDN1O60925 122 aa11.97□□□□□ -0.49
SEC13-218ENST00000490283 ASIPP42127 132 aa11.97□□□□□ -0.49
SEC13-218ENST00000490283 FHITP49789 147 aa11.97□□□□□ -0.49
SEC13-218ENST00000490283 FAM213BQ8TBF2 198 aa11.97□□□□□ -0.49
SEC13-218ENST00000490283 C9orf85Q96MD7 179 aa11.97□□□□□ -0.49
SEC13-218ENST00000490283 PRADC1Q9BSG0 188 aa11.97□□□□□ -0.49
SEC13-218ENST00000490283 GATA1P15976 413 aaPredicted RBP11.96□□□□□ -0.49
SEC13-218ENST00000490283 SFT2D1Q8WV19 159 aa11.96□□□□□ -0.49
SEC13-218ENST00000490283 PTH2Q96A98 100 aa11.96□□□□□ -0.49
SEC13-218ENST00000490283 LY96Q9Y6Y9 160 aa11.96□□□□□ -0.49
SEC13-218ENST00000490283 C16orf90A8MZG2 172 aa11.95□□□□□ -0.5
SEC13-218ENST00000490283 B4DEV8 164 aa11.95□□□□□ -0.5
SEC13-218ENST00000490283 RS1O15537 224 aa11.95□□□□□ -0.5
SEC13-218ENST00000490283 AKR1C3P42330 323 aa11.95□□□□□ -0.5
SEC13-218ENST00000490283 LINC00315P59091 139 aa11.95□□□□□ -0.5
SEC13-218ENST00000490283 RHOHQ15669 191 aa11.95□□□□□ -0.5
SEC13-218ENST00000490283 ZNF506Q5JVG8 444 aa11.95□□□□□ -0.5
SEC13-218ENST00000490283 CFAP126Q5VTH2 177 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 170.9 ms