RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 OR5C1Q8NGR4 320 aa11.3□□□□□ -0.6
TOP3B-217ENST00000489581 KRTAP29-1A8MX34 341 aaPredicted RBP11.29□□□□□ -0.6
TOP3B-217ENST00000489581 DIRC3C9JPN6 131 aa11.29□□□□□ -0.6
TOP3B-217ENST00000489581 TDRG1Q3Y452 100 aa11.29□□□□□ -0.6
TOP3B-217ENST00000489581 LENEPQ9Y5L5 61 aa11.29□□□□□ -0.6
TOP3B-217ENST00000489581 C1QBP02746 253 aa11.28□□□□□ -0.6
TOP3B-217ENST00000489581 LINC00528Q8N1L1 170 aa11.28□□□□□ -0.6
TOP3B-217ENST00000489581 HYLS1Q96M11 299 aa11.28□□□□□ -0.6
TOP3B-217ENST00000489581 TYMSP04818 313 aa11.27□□□□□ -0.61
TOP3B-217ENST00000489581 PFN1P07737 140 aaKnown RBP11.27□□□□□ -0.61
TOP3B-217ENST00000489581 H2AFB2P0C5Z0 115 aa11.27□□□□□ -0.61
TOP3B-217ENST00000489581 UBE2L3P68036 154 aaKnown RBP11.27□□□□□ -0.61
TOP3B-217ENST00000489581 WFDC2Q14508 124 aa11.27□□□□□ -0.61
TOP3B-217ENST00000489581 SLC25A29Q8N8R3 303 aa11.27□□□□□ -0.61
TOP3B-217ENST00000489581 WDR61Q9GZS3 305 aaKnown RBP11.27□□□□□ -0.61
TOP3B-217ENST00000489581 RPH3ALQ9UNE2 315 aa11.27□□□□□ -0.61
TOP3B-217ENST00000489581 DEFB104AQ8WTQ1 72 aa11.26□□□□□ -0.61
TOP3B-217ENST00000489581 TRAV21A0A0B4J279 112 aa11.25□□□□□ -0.61
TOP3B-217ENST00000489581 FBLL1A6NHQ2 334 aaKnown RBP11.25□□□□□ -0.61
TOP3B-217ENST00000489581 F6UZH7 168 aa11.25□□□□□ -0.61
TOP3B-217ENST00000489581 LELP1Q5T871 98 aa11.25□□□□□ -0.61
TOP3B-217ENST00000489581 Q6ZSA8 131 aa11.25□□□□□ -0.61
TOP3B-217ENST00000489581 TMED6Q8WW62 240 aa11.25□□□□□ -0.61
TOP3B-217ENST00000489581 PRADC1Q9BSG0 188 aa11.25□□□□□ -0.61
TOP3B-217ENST00000489581 KCNIP2Q9NS61 270 aa11.25□□□□□ -0.61
TOP3B-217ENST00000489581 IGHV3-73A0A0B4J1V6 119 aa11.24□□□□□ -0.61
TOP3B-217ENST00000489581 PGPA6NDG6 321 aa11.24□□□□□ -0.61
TOP3B-217ENST00000489581 C17orf112F2Z3M2 114 aa11.24□□□□□ -0.61
TOP3B-217ENST00000489581 LECT2O14960 151 aa11.24□□□□□ -0.61
TOP3B-217ENST00000489581 EIF3GO75821 320 aaKnown RBP eCLIP11.24□□□□□ -0.61
TOP3B-217ENST00000489581 TVP23CQ96ET8 276 aa11.24□□□□□ -0.61
TOP3B-217ENST00000489581 TM2D2Q9BX73 214 aa11.24□□□□□ -0.61
TOP3B-217ENST00000489581 SDF2L1Q9HCN8 221 aa11.24□□□□□ -0.61
TOP3B-217ENST00000489581 OR5AC2Q9NZP5 309 aa11.24□□□□□ -0.61
TOP3B-217ENST00000489581 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.23□□□□□ -0.61
TOP3B-217ENST00000489581 SIX6O95475 246 aa11.23□□□□□ -0.61
TOP3B-217ENST00000489581 RHOHQ15669 191 aa11.23□□□□□ -0.61
TOP3B-217ENST00000489581 ZNF876PQ49A33 203 aa11.23□□□□□ -0.61
TOP3B-217ENST00000489581 LRRC37A5PQ49AS3 106 aa11.23□□□□□ -0.61
TOP3B-217ENST00000489581 FFAR4Q5NUL3 377 aa11.23□□□□□ -0.61
TOP3B-217ENST00000489581 DPPA3Q6W0C5 159 aa11.23□□□□□ -0.61
TOP3B-217ENST00000489581 GOLT1AQ6ZVE7 132 aa11.23□□□□□ -0.61
TOP3B-217ENST00000489581 Q8N3U1 123 aa11.23□□□□□ -0.61
TOP3B-217ENST00000489581 CMTM2Q8TAZ6 248 aa11.23□□□□□ -0.61
TOP3B-217ENST00000489581 NMES1Q9C002 83 aa11.23□□□□□ -0.61
TOP3B-217ENST00000489581 OTORQ9NRC9 128 aa11.23□□□□□ -0.61
TOP3B-217ENST00000489581 LRP1Q07954 4544 aaKnown RBP11.22□□□□□ -0.61
TOP3B-217ENST00000489581 TRAV8-1A0A0A6YYK1 113 aa11.22□□□□□ -0.61
TOP3B-217ENST00000489581 LAGE3Q14657 143 aa11.22□□□□□ -0.61
TOP3B-217ENST00000489581 LINC01620Q4KN68 170 aa11.22□□□□□ -0.61
TOP3B-217ENST00000489581 KHDC3LQ587J8 217 aa11.22□□□□□ -0.61
TOP3B-217ENST00000489581 CFAP126Q5VTH2 177 aa11.22□□□□□ -0.61
TOP3B-217ENST00000489581 ATP6V0E2Q8NHE4 81 aa11.22□□□□□ -0.61
TOP3B-217ENST00000489581 KCNS1Q96KK3 526 aa11.22□□□□□ -0.61
TOP3B-217ENST00000489581 ATP5SQ99766 215 aa11.22□□□□□ -0.61
TOP3B-217ENST00000489581 GTSF1LQ9H1H1 148 aa11.22□□□□□ -0.61
TOP3B-217ENST00000489581 TREM1Q9NP99 234 aa11.22□□□□□ -0.61
TOP3B-217ENST00000489581 TRBV6-4A0A1B0GX49 114 aa11.21□□□□□ -0.61
TOP3B-217ENST00000489581 H0YIZ8 118 aa11.21□□□□□ -0.61
TOP3B-217ENST00000489581 RS1O15537 224 aa11.21□□□□□ -0.61
TOP3B-217ENST00000489581 TAS2R45P59539 299 aa11.21□□□□□ -0.61
TOP3B-217ENST00000489581 ASB13Q8WXK3 278 aa11.21□□□□□ -0.61
TOP3B-217ENST00000489581 MBD2Q9UBB5 411 aa11.21□□□□□ -0.61
TOP3B-217ENST00000489581 FAM240BA0A1B0GVZ2 78 aa11.2□□□□□ -0.62
TOP3B-217ENST00000489581 FAM74A1Q5RGS3 127 aa11.2□□□□□ -0.62
TOP3B-217ENST00000489581 SERTAD4-AS1Q5TG53 156 aa11.2□□□□□ -0.62
TOP3B-217ENST00000489581 CIDEAO60543 219 aa11.19□□□□□ -0.62
TOP3B-217ENST00000489581 GNG5P63218 68 aa11.19□□□□□ -0.62
TOP3B-217ENST00000489581 SCXQ7RTU7 201 aa11.19□□□□□ -0.62
TOP3B-217ENST00000489581 SGK494Q96LW2 274 aa11.19□□□□□ -0.62
TOP3B-217ENST00000489581 TRAV8-3A0A0A6YYJ7 113 aa11.18□□□□□ -0.62
TOP3B-217ENST00000489581 DAZ4Q86SG3 579 aaKnown RBP11.18□□□□□ -0.62
TOP3B-217ENST00000489581 SYT8Q8NBV8 401 aa11.18□□□□□ -0.62
TOP3B-217ENST00000489581 BAALCQ8WXS3 180 aa11.18□□□□□ -0.62
TOP3B-217ENST00000489581 DAZ3Q9NR90 486 aaKnown RBP11.18□□□□□ -0.62
TOP3B-217ENST00000489581 C11orf21Q9P2W6 132 aa11.18□□□□□ -0.62
TOP3B-217ENST00000489581 PGPEP1LA6NFU8 196 aa11.17□□□□□ -0.62
TOP3B-217ENST00000489581 ZNF506Q5JVG8 444 aa11.17□□□□□ -0.62
TOP3B-217ENST00000489581 MGST1P10620 155 aaKnown RBP11.16□□□□□ -0.62
TOP3B-217ENST00000489581 ZNF80P51504 273 aaPredicted RBP11.16□□□□□ -0.62
TOP3B-217ENST00000489581 TMEM75Q8N9X5 138 aa11.16□□□□□ -0.62
TOP3B-217ENST00000489581 SCGB1C1Q8TD33 95 aa11.16□□□□□ -0.62
TOP3B-217ENST00000489581 C9orf85Q96MD7 179 aa11.16□□□□□ -0.62
TOP3B-217ENST00000489581 SMIM3Q9BZL3 60 aa11.16□□□□□ -0.62
TOP3B-217ENST00000489581 GAGE12JA6NER3 117 aa11.15□□□□□ -0.62
TOP3B-217ENST00000489581 KRTAP10-4P60372 401 aaPredicted RBP11.15□□□□□ -0.62
TOP3B-217ENST00000489581 GAGE1Q13065 139 aa11.15□□□□□ -0.62
TOP3B-217ENST00000489581 GAGE4Q13068 117 aa11.15□□□□□ -0.62
TOP3B-217ENST00000489581 GAGE5Q13069 117 aa11.15□□□□□ -0.62
TOP3B-217ENST00000489581 GAGE13Q4V321 117 aa11.15□□□□□ -0.62
TOP3B-217ENST00000489581 PQLC2Q6ZP29 291 aa11.15□□□□□ -0.62
TOP3B-217ENST00000489581 ARL6IP6Q8N6S5 226 aa11.15□□□□□ -0.62
TOP3B-217ENST00000489581 NDFIP1Q9BT67 221 aa11.15□□□□□ -0.62
TOP3B-217ENST00000489581 HSPB11Q9Y547 144 aa11.15□□□□□ -0.62
TOP3B-217ENST00000489581 A0A1W2PPV4 95 aa11.14□□□□□ -0.63
TOP3B-217ENST00000489581 RBFOX3A6NFN3 312 aa11.14□□□□□ -0.63
TOP3B-217ENST00000489581 GGTLC3B5MD39 225 aa11.14□□□□□ -0.63
TOP3B-217ENST00000489581 HMGB3O15347 200 aaKnown RBP11.14□□□□□ -0.63
TOP3B-217ENST00000489581 MZT2BQ6NZ67 158 aa11.14□□□□□ -0.63
TOP3B-217ENST00000489581 CCDC32Q9BV29 185 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms