RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 ZC2HC1AQ96GY0 325 aa11.25□□□□□ -0.61
C9orf3-219ENST00000488186 FAM210AQ96ND0 272 aa11.25□□□□□ -0.61
C9orf3-219ENST00000488186 DERL1Q9BUN8 251 aa11.25□□□□□ -0.61
C9orf3-219ENST00000488186 RAB19A4D1S5 217 aa11.24□□□□□ -0.61
C9orf3-219ENST00000488186 GNRH2O43555 120 aa11.24□□□□□ -0.61
C9orf3-219ENST00000488186 MGST1P10620 155 aaKnown RBP11.24□□□□□ -0.61
C9orf3-219ENST00000488186 ZNF674Q2M3X9 581 aa11.24□□□□□ -0.61
C9orf3-219ENST00000488186 TDRG1Q3Y452 100 aa11.24□□□□□ -0.61
C9orf3-219ENST00000488186 CASC10Q5T4H9 136 aa11.24□□□□□ -0.61
C9orf3-219ENST00000488186 Q6ZTC4 211 aa11.24□□□□□ -0.61
C9orf3-219ENST00000488186 KLK5Q9Y337 293 aaPredicted RBP11.24□□□□□ -0.61
C9orf3-219ENST00000488186 TRAV10A0A0B4J240 114 aa11.23□□□□□ -0.61
C9orf3-219ENST00000488186 PLAC8L1A1L4L8 177 aa11.23□□□□□ -0.61
C9orf3-219ENST00000488186 NUPR2A6NF83 97 aa11.23□□□□□ -0.61
C9orf3-219ENST00000488186 TMEM250H0YL14 139 aa11.23□□□□□ -0.61
C9orf3-219ENST00000488186 SH2D1AO60880 128 aa11.23□□□□□ -0.61
C9orf3-219ENST00000488186 HTN3P15516 51 aa11.23□□□□□ -0.61
C9orf3-219ENST00000488186 TCL1AP56279 114 aa11.23□□□□□ -0.61
C9orf3-219ENST00000488186 DAZ2Q13117 558 aaKnown RBP11.23□□□□□ -0.61
C9orf3-219ENST00000488186 CENPWQ5EE01 88 aa11.23□□□□□ -0.61
C9orf3-219ENST00000488186 PRR27Q6MZM9 219 aa11.23□□□□□ -0.61
C9orf3-219ENST00000488186 COX8CQ7Z4L0 72 aa11.23□□□□□ -0.61
C9orf3-219ENST00000488186 DAZAP1Q96EP5 407 aaKnown RBP11.23□□□□□ -0.61
C9orf3-219ENST00000488186 TRGV1A0A0A0MS02 117 aa11.22□□□□□ -0.61
C9orf3-219ENST00000488186 B4DEV8 164 aa11.22□□□□□ -0.61
C9orf3-219ENST00000488186 S100A4P26447 101 aaKnown RBP11.22□□□□□ -0.61
C9orf3-219ENST00000488186 PEA15Q15121 130 aa11.22□□□□□ -0.61
C9orf3-219ENST00000488186 CEMP1Q6PRD7 247 aaPredicted RBP11.22□□□□□ -0.61
C9orf3-219ENST00000488186 C11orf72Q8NBR9 251 aa11.22□□□□□ -0.61
C9orf3-219ENST00000488186 SPXQ9BT56 116 aa11.22□□□□□ -0.61
C9orf3-219ENST00000488186 BIN3Q9NQY0 253 aa11.22□□□□□ -0.61
C9orf3-219ENST00000488186 MDFICQ9P1T7 246 aa11.22□□□□□ -0.61
C9orf3-219ENST00000488186 TRGV2A0A075B6R0 118 aa11.21□□□□□ -0.61
C9orf3-219ENST00000488186 DEFB131BA0A096LNP1 70 aa11.21□□□□□ -0.61
C9orf3-219ENST00000488186 GAGE12BA1L429 117 aa11.21□□□□□ -0.61
C9orf3-219ENST00000488186 M0R036 132 aa11.21□□□□□ -0.61
C9orf3-219ENST00000488186 GAGE7O76087 117 aa11.21□□□□□ -0.61
C9orf3-219ENST00000488186 TYMSP04818 313 aa11.21□□□□□ -0.61
C9orf3-219ENST00000488186 GAGE12FP0CL80 117 aa11.21□□□□□ -0.61
C9orf3-219ENST00000488186 GAGE12GP0CL81 117 aa11.21□□□□□ -0.61
C9orf3-219ENST00000488186 GAGE12IP0CL82 117 aa11.21□□□□□ -0.61
C9orf3-219ENST00000488186 CRIP1P50238 77 aa11.21□□□□□ -0.61
C9orf3-219ENST00000488186 OR5I1Q13606 314 aa11.21□□□□□ -0.61
C9orf3-219ENST00000488186 C11orf21Q9P2W6 132 aa11.21□□□□□ -0.61
C9orf3-219ENST00000488186 TENM2Q9NT68 2774 aa11.2□□□□□ -0.62
C9orf3-219ENST00000488186 IGHV3-16A0A0C4DH30 117 aa11.2□□□□□ -0.62
C9orf3-219ENST00000488186 SMIM12Q96EX1 92 aa11.2□□□□□ -0.62
C9orf3-219ENST00000488186 MLST8Q9BVC4 326 aa11.2□□□□□ -0.62
C9orf3-219ENST00000488186 PARLQ9H300 379 aa11.2□□□□□ -0.62
C9orf3-219ENST00000488186 TMSB15BA0A087X1C1 80 aa11.19□□□□□ -0.62
C9orf3-219ENST00000488186 NDUFS6O75380 124 aaKnown RBP11.19□□□□□ -0.62
C9orf3-219ENST00000488186 ATP5G1P05496 136 aa11.19□□□□□ -0.62
C9orf3-219ENST00000488186 ASIPP42127 132 aa11.19□□□□□ -0.62
C9orf3-219ENST00000488186 LGALS9BQ3B8N2 356 aa11.19□□□□□ -0.62
C9orf3-219ENST00000488186 Q6ZTI0 123 aa11.19□□□□□ -0.62
C9orf3-219ENST00000488186 IGKV3D-20A0A0C4DH25 116 aa11.18□□□□□ -0.62
C9orf3-219ENST00000488186 IGLL5B9A064 214 aa11.18□□□□□ -0.62
C9orf3-219ENST00000488186 KRBOX1C9JBD0 128 aa11.18□□□□□ -0.62
C9orf3-219ENST00000488186 SPINK4O60575 86 aa11.18□□□□□ -0.62
C9orf3-219ENST00000488186 SRP19P09132 144 aaKnown RBP11.18□□□□□ -0.62
C9orf3-219ENST00000488186 SMIM7Q9BQ49 75 aa11.18□□□□□ -0.62
C9orf3-219ENST00000488186 SMDT1Q9H4I9 107 aa11.18□□□□□ -0.62
C9orf3-219ENST00000488186 MRPL16Q9NX20 251 aaKnown RBP11.18□□□□□ -0.62
C9orf3-219ENST00000488186 STARD9Q9P2P6 4700 aa11.17□□□□□ -0.62
C9orf3-219ENST00000488186 GRIFINA4D1Z8 144 aa11.17□□□□□ -0.62
C9orf3-219ENST00000488186 C9JCJ5 164 aa11.17□□□□□ -0.62
C9orf3-219ENST00000488186 F5H768 121 aa11.17□□□□□ -0.62
C9orf3-219ENST00000488186 M0R2P5 195 aa11.17□□□□□ -0.62
C9orf3-219ENST00000488186 IFITM2Q01629 132 aa11.17□□□□□ -0.62
C9orf3-219ENST00000488186 LINC01559Q495D7 138 aa11.17□□□□□ -0.62
C9orf3-219ENST00000488186 PGPEP1LA6NFU8 196 aa11.16□□□□□ -0.62
C9orf3-219ENST00000488186 ZNF727A8MUV8 499 aa11.16□□□□□ -0.62
C9orf3-219ENST00000488186 IGLV2-8P01709 118 aa11.16□□□□□ -0.62
C9orf3-219ENST00000488186 CLLU1Q5K131 121 aa11.16□□□□□ -0.62
C9orf3-219ENST00000488186 KMT2CQ8NEZ4 4911 aaKnown RBP11.16□□□□□ -0.62
C9orf3-219ENST00000488186 TRBV20OR9-2A0A075B6H5 130 aa11.15□□□□□ -0.62
C9orf3-219ENST00000488186 P01737 135 aa11.15□□□□□ -0.62
C9orf3-219ENST00000488186 LINC00612Q8N6U2 182 aa11.15□□□□□ -0.62
C9orf3-219ENST00000488186 OCC1Q8TAD7 63 aa11.15□□□□□ -0.62
C9orf3-219ENST00000488186 DYNC2H1Q8NCM8 4307 aaKnown RBP11.14□□□□□ -0.63
C9orf3-219ENST00000488186 ZNF876PQ49A33 203 aa11.14□□□□□ -0.63
C9orf3-219ENST00000488186 FAM74A3Q4VXF1 159 aa11.14□□□□□ -0.63
C9orf3-219ENST00000488186 RASL10AQ92737 203 aa11.14□□□□□ -0.63
C9orf3-219ENST00000488186 XKRY2A2RUG3 117 aa11.13□□□□□ -0.63
C9orf3-219ENST00000488186 H3BVH4 76 aa11.13□□□□□ -0.63
C9orf3-219ENST00000488186 IGHV3-53P01767 116 aa11.13□□□□□ -0.63
C9orf3-219ENST00000488186 ARMS2P0C7Q2 107 aa11.13□□□□□ -0.63
C9orf3-219ENST00000488186 RNASE3P12724 160 aaKnown RBP11.13□□□□□ -0.63
C9orf3-219ENST00000488186 RPS20P60866 119 aaKnown RBP11.13□□□□□ -0.63
C9orf3-219ENST00000488186 RPL19P84098 196 aaKnown RBP11.13□□□□□ -0.63
C9orf3-219ENST00000488186 SRSF3P84103 164 aaKnown RBP11.13□□□□□ -0.63
C9orf3-219ENST00000488186 SYT8Q8NBV8 401 aa11.13□□□□□ -0.63
C9orf3-219ENST00000488186 OR2D3Q8NGH3 330 aa11.13□□□□□ -0.63
C9orf3-219ENST00000488186 C9orf85Q96MD7 179 aa11.13□□□□□ -0.63
C9orf3-219ENST00000488186 NDUFAF3Q9BU61 184 aa11.13□□□□□ -0.63
C9orf3-219ENST00000488186 IL36BQ9NZH7 164 aa11.13□□□□□ -0.63
C9orf3-219ENST00000488186 PHLDA3Q9Y5J5 127 aa11.13□□□□□ -0.63
C9orf3-219ENST00000488186 LY96Q9Y6Y9 160 aa11.13□□□□□ -0.63
C9orf3-219ENST00000488186 IGHV4-4A0A075B6R2 117 aa11.12□□□□□ -0.63
C9orf3-219ENST00000488186 TCTAP57738 103 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms