RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 C11orf45Q8TAV5 145 aa12.77□□□□□ -0.37
CPNE1-224ENST00000483359 WWC2-AS2Q96NR7 200 aa12.77□□□□□ -0.37
CPNE1-224ENST00000483359 LINC00467Q9BRT7 94 aa12.77□□□□□ -0.37
CPNE1-224ENST00000483359 TYMSP04818 313 aa12.76□□□□□ -0.37
CPNE1-224ENST00000483359 NANOS2P60321 138 aaKnown RBP12.76□□□□□ -0.37
CPNE1-224ENST00000483359 ZNF493Q6ZR52 646 aa12.76□□□□□ -0.37
CPNE1-224ENST00000483359 C11orf72Q8NBR9 251 aa12.76□□□□□ -0.37
CPNE1-224ENST00000483359 IL17DQ8TAD2 202 aa12.76□□□□□ -0.37
CPNE1-224ENST00000483359 SDF2L1Q9HCN8 221 aa12.76□□□□□ -0.37
CPNE1-224ENST00000483359 NOP10Q9NPE3 64 aaKnown RBP12.76□□□□□ -0.37
CPNE1-224ENST00000483359 MDFICQ9P1T7 246 aa12.76□□□□□ -0.37
CPNE1-224ENST00000483359 SNURFLB1AK76 121 aa12.76□□□□□ -0.37
CPNE1-224ENST00000483359 ORM1P02763 201 aa12.76□□□□□ -0.37
CPNE1-224ENST00000483359 SMIM7Q9BQ49 75 aa12.76□□□□□ -0.37
CPNE1-224ENST00000483359 DKK2Q9UBU2 259 aa12.76□□□□□ -0.37
CPNE1-224ENST00000483359 TMSB15BA0A087X1C1 80 aa12.75□□□□□ -0.37
CPNE1-224ENST00000483359 IGKV3D-20A0A0C4DH25 116 aa12.75□□□□□ -0.37
CPNE1-224ENST00000483359 CXorf65A6NEN9 183 aa12.75□□□□□ -0.37
CPNE1-224ENST00000483359 TDRG1Q3Y452 100 aa12.75□□□□□ -0.37
CPNE1-224ENST00000483359 TRGV11A0A075B6L2 103 aa12.74□□□□□ -0.37
CPNE1-224ENST00000483359 SPART-AS1P0CW21 52 aa12.74□□□□□ -0.37
CPNE1-224ENST00000483359 KCNS1Q96KK3 526 aa12.74□□□□□ -0.37
CPNE1-224ENST00000483359 TIMM8BQ9Y5J9 83 aaPredicted RBP12.74□□□□□ -0.37
CPNE1-224ENST00000483359 ZNF727A8MUV8 499 aa12.74□□□□□ -0.37
CPNE1-224ENST00000483359 C9JCJ5 164 aa12.74□□□□□ -0.37
CPNE1-224ENST00000483359 ZNF415Q09FC8 603 aa12.74□□□□□ -0.37
CPNE1-224ENST00000483359 OR5I1Q13606 314 aa12.74□□□□□ -0.37
CPNE1-224ENST00000483359 B4DEV8 164 aa12.73□□□□□ -0.37
CPNE1-224ENST00000483359 DEFB130BP0DP73 79 aa12.73□□□□□ -0.37
CPNE1-224ENST00000483359 DEFB130AP0DP74 79 aa12.73□□□□□ -0.37
CPNE1-224ENST00000483359 RPL19P84098 196 aaKnown RBP12.73□□□□□ -0.37
CPNE1-224ENST00000483359 DNAH7Q8WXX0 4024 aa12.73□□□□□ -0.37
CPNE1-224ENST00000483359 K7EN84 100 aa12.72□□□□□ -0.37
CPNE1-224ENST00000483359 TCL1AP56279 114 aa12.72□□□□□ -0.37
CPNE1-224ENST00000483359 IBA57Q5T440 356 aaKnown RBP12.72□□□□□ -0.37
CPNE1-224ENST00000483359 OCC1Q8TAD7 63 aa12.72□□□□□ -0.37
CPNE1-224ENST00000483359 SMIM12Q96EX1 92 aa12.72□□□□□ -0.37
CPNE1-224ENST00000483359 IGHV3-16A0A0C4DH30 117 aa12.72□□□□□ -0.37
CPNE1-224ENST00000483359 NDUFS6O75380 124 aaKnown RBP12.72□□□□□ -0.37
CPNE1-224ENST00000483359 Q6ZTC4 211 aa12.72□□□□□ -0.37
CPNE1-224ENST00000483359 SMDT1Q9H4I9 107 aa12.72□□□□□ -0.37
CPNE1-224ENST00000483359 GRIFINA4D1Z8 144 aa12.71□□□□□ -0.37
CPNE1-224ENST00000483359 C12orf74Q32Q52 190 aa12.71□□□□□ -0.37
CPNE1-224ENST00000483359 LYRM9A8MSI8 78 aa12.7□□□□□ -0.38
CPNE1-224ENST00000483359 KRBOX1C9JBD0 128 aa12.7□□□□□ -0.38
CPNE1-224ENST00000483359 LINC01559Q495D7 138 aa12.7□□□□□ -0.38
CPNE1-224ENST00000483359 ZFAND6Q6FIF0 208 aa12.7□□□□□ -0.38
CPNE1-224ENST00000483359 Q6ZTI0 123 aa12.7□□□□□ -0.38
CPNE1-224ENST00000483359 DAZAP1Q96EP5 407 aaKnown RBP12.7□□□□□ -0.38
CPNE1-224ENST00000483359 MRPL16Q9NX20 251 aaKnown RBP12.7□□□□□ -0.38
CPNE1-224ENST00000483359 TRGV1A0A0A0MS02 117 aa12.7□□□□□ -0.38
CPNE1-224ENST00000483359 GAGE12BA1L429 117 aa12.7□□□□□ -0.38
CPNE1-224ENST00000483359 GAGE7O76087 117 aa12.7□□□□□ -0.38
CPNE1-224ENST00000483359 GAGE12FP0CL80 117 aa12.7□□□□□ -0.38
CPNE1-224ENST00000483359 GAGE12GP0CL81 117 aa12.7□□□□□ -0.38
CPNE1-224ENST00000483359 GAGE12IP0CL82 117 aa12.7□□□□□ -0.38
CPNE1-224ENST00000483359 DAD1P61803 113 aa12.7□□□□□ -0.38
CPNE1-224ENST00000483359 MUC7Q8TAX7 377 aa12.7□□□□□ -0.38
CPNE1-224ENST00000483359 SFTA3P0C7M3 94 aa12.69□□□□□ -0.38
CPNE1-224ENST00000483359 S100A4P26447 101 aaKnown RBP12.69□□□□□ -0.38
CPNE1-224ENST00000483359 DAZ2Q13117 558 aaKnown RBP12.69□□□□□ -0.38
CPNE1-224ENST00000483359 COMMD7Q86VX2 200 aa12.69□□□□□ -0.38
CPNE1-224ENST00000483359 RNASE7Q9H1E1 156 aaKnown RBP12.69□□□□□ -0.38
CPNE1-224ENST00000483359 TEX48A0A1B0GUV7 120 aa12.69□□□□□ -0.38
CPNE1-224ENST00000483359 H3BVH4 76 aa12.69□□□□□ -0.38
CPNE1-224ENST00000483359 ASIPP42127 132 aa12.69□□□□□ -0.38
CPNE1-224ENST00000483359 SOHLH1Q5JUK2 328 aa12.69□□□□□ -0.38
CPNE1-224ENST00000483359 RNASE3P12724 160 aaKnown RBP12.68□□□□□ -0.38
CPNE1-224ENST00000483359 LINC01551Q86U37 167 aa12.68□□□□□ -0.38
CPNE1-224ENST00000483359 C19orf71A6NCJ1 209 aa12.67□□□□□ -0.38
CPNE1-224ENST00000483359 P01737 135 aa12.67□□□□□ -0.38
CPNE1-224ENST00000483359 HTN3P15516 51 aa12.67□□□□□ -0.38
CPNE1-224ENST00000483359 SLC7A5P1Q8MH63 180 aa12.67□□□□□ -0.38
CPNE1-224ENST00000483359 BIN3Q9NQY0 253 aa12.67□□□□□ -0.38
CPNE1-224ENST00000483359 CSMD3Q7Z407 3707 aa12.67□□□□□ -0.38
CPNE1-224ENST00000483359 SPINK4O60575 86 aa12.67□□□□□ -0.38
CPNE1-224ENST00000483359 FAM74A3Q4VXF1 159 aa12.67□□□□□ -0.38
CPNE1-224ENST00000483359 ZNF575Q86XF7 245 aa12.67□□□□□ -0.38
CPNE1-224ENST00000483359 OR2D3Q8NGH3 330 aa12.67□□□□□ -0.38
CPNE1-224ENST00000483359 GZMBP10144 247 aa12.66□□□□□ -0.38
CPNE1-224ENST00000483359 TMEM241Q24JQ0 296 aa12.66□□□□□ -0.38
CPNE1-224ENST00000483359 NUDT10Q8NFP7 164 aa12.66□□□□□ -0.38
CPNE1-224ENST00000483359 NUDT11Q96G61 164 aa12.66□□□□□ -0.38
CPNE1-224ENST00000483359 STARD9Q9P2P6 4700 aa12.65□□□□□ -0.38
CPNE1-224ENST00000483359 TRGV2A0A075B6R0 118 aa12.65□□□□□ -0.38
CPNE1-224ENST00000483359 ADIRFQ15847 76 aa12.65□□□□□ -0.38
CPNE1-224ENST00000483359 PHLDA1Q8WV24 401 aaPredicted RBP12.65□□□□□ -0.38
CPNE1-224ENST00000483359 C9orf85Q96MD7 179 aa12.65□□□□□ -0.38
CPNE1-224ENST00000483359 NAT8Q9UHE5 227 aa12.65□□□□□ -0.38
CPNE1-224ENST00000483359 LY96Q9Y6Y9 160 aa12.65□□□□□ -0.38
CPNE1-224ENST00000483359 ARMS2P0C7Q2 107 aa12.65□□□□□ -0.38
CPNE1-224ENST00000483359 ERVFC1-1P60608 527 aa12.65□□□□□ -0.38
CPNE1-224ENST00000483359 SPXQ9BT56 116 aa12.65□□□□□ -0.38
CPNE1-224ENST00000483359 RPL23P62829 140 aaKnown RBP12.64□□□□□ -0.39
CPNE1-224ENST00000483359 LINC00612Q8N6U2 182 aa12.64□□□□□ -0.39
CPNE1-224ENST00000483359 LINC00862A6NCI5 91 aa12.63□□□□□ -0.39
CPNE1-224ENST00000483359 M0R2P5 195 aa12.63□□□□□ -0.39
CPNE1-224ENST00000483359 UQCC3Q6UW78 93 aa12.63□□□□□ -0.39
CPNE1-224ENST00000483359 TPPP3Q9BW30 176 aa12.63□□□□□ -0.39
CPNE1-224ENST00000483359 IL36BQ9NZH7 164 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms