RNA–Protein interactions for RNA: ENST00000482873.6

DDR1-244, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 2,673 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-244ENST00000482873 SMAD5-AS1Q9Y6J3 95 aa11.75□□□□□ -0.53
DDR1-244ENST00000482873 POLQO75417 2590 aa11.75□□□□□ -0.53
DDR1-244ENST00000482873 CACNA1AO00555 2505 aa11.75□□□□□ -0.53
DDR1-244ENST00000482873 TRBV7-9A0A0J9YWB2 115 aa11.75□□□□□ -0.53
DDR1-244ENST00000482873 LINC01546A6NGU7 62 aa11.75□□□□□ -0.53
DDR1-244ENST00000482873 ORM1P02763 201 aa11.75□□□□□ -0.53
DDR1-244ENST00000482873 WFDC2Q14508 124 aa11.75□□□□□ -0.53
DDR1-244ENST00000482873 BRD3OSQ6XYD6 125 aa11.75□□□□□ -0.53
DDR1-244ENST00000482873 CEND1Q8N111 149 aa11.75□□□□□ -0.53
DDR1-244ENST00000482873 TTC9CQ8N5M4 171 aa11.75□□□□□ -0.53
DDR1-244ENST00000482873 PSMG3-AS1Q96PY0 264 aa11.75□□□□□ -0.53
DDR1-244ENST00000482873 TM2D2Q9BX73 214 aa11.75□□□□□ -0.53
DDR1-244ENST00000482873 CUBNO60494 3623 aa11.75□□□□□ -0.53
DDR1-244ENST00000482873 BRI3O95415 125 aa11.74□□□□□ -0.53
DDR1-244ENST00000482873 GNLYP22749 145 aa11.74□□□□□ -0.53
DDR1-244ENST00000482873 PPIFP30405 207 aaKnown RBP11.74□□□□□ -0.53
DDR1-244ENST00000482873 TMEM158Q8WZ71 300 aa11.74□□□□□ -0.53
DDR1-244ENST00000482873 SIRPDQ9H106 197 aa11.74□□□□□ -0.53
DDR1-244ENST00000482873 TMEM8BA6NDV4 472 aa11.74□□□□□ -0.53
DDR1-244ENST00000482873 PRAC2D3DTV9 90 aa11.74□□□□□ -0.53
DDR1-244ENST00000482873 IGHG4P01861 327 aa11.74□□□□□ -0.53
DDR1-244ENST00000482873 CLEC19AQ6UXS0 136 aa11.74□□□□□ -0.53
DDR1-244ENST00000482873 MRPL16Q9NX20 251 aaKnown RBP11.74□□□□□ -0.53
DDR1-244ENST00000482873 SS18L2Q9UHA2 77 aa11.74□□□□□ -0.53
DDR1-244ENST00000482873 Q8N6K4 173 aa11.73□□□□□ -0.53
DDR1-244ENST00000482873 SRSF8Q9BRL6 282 aaKnown RBP11.73□□□□□ -0.53
DDR1-244ENST00000482873 MYO18BQ8IUG5 2567 aa11.73□□□□□ -0.53
DDR1-244ENST00000482873 TRAV40A0A0B4J280 105 aa11.73□□□□□ -0.53
DDR1-244ENST00000482873 E9PLD3 99 aa11.73□□□□□ -0.53
DDR1-244ENST00000482873 DTX2Q86UW9 622 aa11.73□□□□□ -0.53
DDR1-244ENST00000482873 MAPKAPK5-AS1Q8N8E1 139 aa11.73□□□□□ -0.53
DDR1-244ENST00000482873 NXT2Q9NPJ8 142 aaKnown RBP11.73□□□□□ -0.53
DDR1-244ENST00000482873 TMEM160Q9NX00 188 aa11.73□□□□□ -0.53
DDR1-244ENST00000482873 IGSF10Q6WRI0 2623 aa11.73□□□□□ -0.53
DDR1-244ENST00000482873 AJUBAQ96IF1 538 aa11.73□□□□□ -0.53
DDR1-244ENST00000482873 CNFNQ9BYD5 112 aa11.73□□□□□ -0.53
DDR1-244ENST00000482873 SPANXB1Q9NS25 103 aaPredicted RBP11.73□□□□□ -0.53
DDR1-244ENST00000482873 USP9XQ93008 2570 aaPredicted RBP11.72□□□□□ -0.53
DDR1-244ENST00000482873 IGLL5B9A064 214 aa11.72□□□□□ -0.53
DDR1-244ENST00000482873 H3BMG7 143 aa11.72□□□□□ -0.53
DDR1-244ENST00000482873 J3QR89 54 aa11.72□□□□□ -0.53
DDR1-244ENST00000482873 DPM2O94777 84 aa11.72□□□□□ -0.53
DDR1-244ENST00000482873 HIF1ANQ9NWT6 349 aa11.72□□□□□ -0.53
DDR1-244ENST00000482873 TNFRSF18Q9Y5U5 241 aa11.72□□□□□ -0.53
DDR1-244ENST00000482873 ABCA2Q9BZC7 2435 aa11.72□□□□□ -0.53
DDR1-244ENST00000482873 SH2D6Q7Z4S9 175 aa11.72□□□□□ -0.53
DDR1-244ENST00000482873 MRPL35Q9NZE8 188 aaKnown RBP11.72□□□□□ -0.53
DDR1-244ENST00000482873 PSMG4Q5JS54 123 aa11.71□□□□□ -0.53
DDR1-244ENST00000482873 AMTNQ6UX39 209 aa11.71□□□□□ -0.53
DDR1-244ENST00000482873 USP9YO00507 2555 aaPredicted RBP11.71□□□□□ -0.53
DDR1-244ENST00000482873 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.71□□□□□ -0.54
DDR1-244ENST00000482873 RPL7P18124 248 aaKnown RBP11.71□□□□□ -0.54
DDR1-244ENST00000482873 Q6ZQT7 251 aa11.71□□□□□ -0.54
DDR1-244ENST00000482873 IGLV2-18A0A075B6J9 118 aa11.7□□□□□ -0.54
DDR1-244ENST00000482873 F8W1H4 67 aa11.7□□□□□ -0.54
DDR1-244ENST00000482873 GATA3P23771 443 aa11.7□□□□□ -0.54
DDR1-244ENST00000482873 LMO4P61968 165 aa11.7□□□□□ -0.54
DDR1-244ENST00000482873 ETDBQ3ZM63 59 aa11.7□□□□□ -0.54
DDR1-244ENST00000482873 ZNF418Q8TF45 676 aaPredicted RBP11.7□□□□□ -0.54
DDR1-244ENST00000482873 FABP5P3A8MUU1 101 aa11.69□□□□□ -0.54
DDR1-244ENST00000482873 ATP5LO75964 103 aa11.69□□□□□ -0.54
DDR1-244ENST00000482873 EFNA4P52798 201 aa11.69□□□□□ -0.54
DDR1-244ENST00000482873 ITLN2Q8WWU7 325 aaPredicted RBP11.69□□□□□ -0.54
DDR1-244ENST00000482873 ZANQ9Y493 2812 aa11.69□□□□□ -0.54
DDR1-244ENST00000482873 SRSF1Q07955 248 aaKnown RBP eCLIP11.69□□□□□ -0.54
DDR1-244ENST00000482873 LY6EQ16553 131 aa11.69□□□□□ -0.54
DDR1-244ENST00000482873 C12orf74Q32Q52 190 aa11.69□□□□□ -0.54
DDR1-244ENST00000482873 SPAG8Q99932 426 aaPredicted RBP11.69□□□□□ -0.54
DDR1-244ENST00000482873 FAM208BQ5VWN6 2430 aa11.68□□□□□ -0.54
DDR1-244ENST00000482873 TRGV3P03979 118 aa11.68□□□□□ -0.54
DDR1-244ENST00000482873 UBE2E1P51965 193 aa11.68□□□□□ -0.54
DDR1-244ENST00000482873 MINOS1Q5TGZ0 78 aa11.68□□□□□ -0.54
DDR1-244ENST00000482873 Q8N8P6 123 aa11.68□□□□□ -0.54
DDR1-244ENST00000482873 MINOS1-NBL1R4GNA1 71 aa11.68□□□□□ -0.54
DDR1-244ENST00000482873 DEFB1P60022 68 aa11.68□□□□□ -0.54
DDR1-244ENST00000482873 EBI3Q14213 229 aa11.68□□□□□ -0.54
DDR1-244ENST00000482873 LCNL1Q6ZST4 164 aa11.68□□□□□ -0.54
DDR1-244ENST00000482873 CCDC140Q96MF4 163 aa11.68□□□□□ -0.54
DDR1-244ENST00000482873 DOPEY2Q9Y3R5 2298 aa11.67□□□□□ -0.54
DDR1-244ENST00000482873 IGKV3-7A0A075B6H7 116 aa11.67□□□□□ -0.54
DDR1-244ENST00000482873 TRAV26-2A0A0B4J265 109 aa11.67□□□□□ -0.54
DDR1-244ENST00000482873 CENPVL3A0A0U1RRI6 287 aa11.67□□□□□ -0.54
DDR1-244ENST00000482873 SRSF2Q01130 221 aaKnown RBP11.67□□□□□ -0.54
DDR1-244ENST00000482873 ERG28Q9UKR5 140 aa11.67□□□□□ -0.54
DDR1-244ENST00000482873 SPRY2O43597 315 aa11.67□□□□□ -0.54
DDR1-244ENST00000482873 ZNF502Q8TBZ5 544 aa11.67□□□□□ -0.54
DDR1-244ENST00000482873 IGKV3D-20A0A0C4DH25 116 aa11.66□□□□□ -0.54
DDR1-244ENST00000482873 IGHV4-39P01824 125 aa11.66□□□□□ -0.54
DDR1-244ENST00000482873 HLA-DRB4P13762 266 aa11.66□□□□□ -0.54
DDR1-244ENST00000482873 INSL3P51460 131 aa11.66□□□□□ -0.54
DDR1-244ENST00000482873 LINC01559Q495D7 138 aa11.66□□□□□ -0.54
DDR1-244ENST00000482873 IL17RELQ6ZVW7 336 aa11.66□□□□□ -0.54
DDR1-244ENST00000482873 HLA-DRB4X5D2U9 266 aa11.66□□□□□ -0.54
DDR1-244ENST00000482873 NPFFO15130 113 aa11.66□□□□□ -0.54
DDR1-244ENST00000482873 GAGE5Q13069 117 aa11.66□□□□□ -0.54
DDR1-244ENST00000482873 GAGE6Q13070 117 aa11.66□□□□□ -0.54
DDR1-244ENST00000482873 C11orf21Q9P2W6 132 aa11.66□□□□□ -0.54
DDR1-244ENST00000482873 MYOZ3Q8TDC0 251 aa11.65□□□□□ -0.54
DDR1-244ENST00000482873 RNF183Q96D59 192 aa11.65□□□□□ -0.54
DDR1-244ENST00000482873 HIST1H4GQ99525 98 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms