RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 SFTA3P0C7M3 94 aa10.61□□□□□ -0.71
CDK9-203ENST00000480353 SRIP30626 198 aa10.61□□□□□ -0.71
CDK9-203ENST00000480353 PPT1P50897 306 aa10.61□□□□□ -0.71
CDK9-203ENST00000480353 CRYBA4P53673 196 aa10.61□□□□□ -0.71
CDK9-203ENST00000480353 FLI1Q01543 452 aaPredicted RBP10.61□□□□□ -0.71
CDK9-203ENST00000480353 TDRG1Q3Y452 100 aa10.61□□□□□ -0.71
CDK9-203ENST00000480353 SMUG1Q53HV7 270 aa10.61□□□□□ -0.71
CDK9-203ENST00000480353 CYB561D1Q8N8Q1 229 aa10.61□□□□□ -0.71
CDK9-203ENST00000480353 RASL10AQ92737 203 aa10.61□□□□□ -0.71
CDK9-203ENST00000480353 EPDR1Q9UM22 224 aa10.61□□□□□ -0.71
CDK9-203ENST00000480353 TRAV4A0A0B4J268 109 aa10.6□□□□□ -0.71
CDK9-203ENST00000480353 IGHV3-16A0A0C4DH30 117 aa10.6□□□□□ -0.71
CDK9-203ENST00000480353 A0A1W2PPQ1 181 aa10.6□□□□□ -0.71
CDK9-203ENST00000480353 GCGP01275 180 aa10.6□□□□□ -0.71
CDK9-203ENST00000480353 TYMSP04818 313 aa10.6□□□□□ -0.71
CDK9-203ENST00000480353 UBE2G2P60604 165 aa10.6□□□□□ -0.71
CDK9-203ENST00000480353 FHL2Q14192 279 aa10.6□□□□□ -0.71
CDK9-203ENST00000480353 SAPCD1Q5SSQ6 148 aa10.6□□□□□ -0.71
CDK9-203ENST00000480353 NEGR1Q7Z3B1 354 aa10.6□□□□□ -0.71
CDK9-203ENST00000480353 TMEM75Q8N9X5 138 aa10.6□□□□□ -0.71
CDK9-203ENST00000480353 SUN5Q8TC36 379 aa10.6□□□□□ -0.71
CDK9-203ENST00000480353 ZNF479Q96JC4 524 aa10.6□□□□□ -0.71
CDK9-203ENST00000480353 A0A1W2PRE2 83 aa10.59□□□□□ -0.71
CDK9-203ENST00000480353 GGTLC3B5MD39 225 aa10.59□□□□□ -0.71
CDK9-203ENST00000480353 C9JCJ5 164 aa10.59□□□□□ -0.71
CDK9-203ENST00000480353 SIVA1O15304 175 aa10.59□□□□□ -0.71
CDK9-203ENST00000480353 ORM1P02763 201 aa10.59□□□□□ -0.71
CDK9-203ENST00000480353 MED14OSP0DP75 135 aa10.59□□□□□ -0.71
CDK9-203ENST00000480353 TNP2Q05952 138 aa10.59□□□□□ -0.71
CDK9-203ENST00000480353 TVP23CQ96ET8 276 aa10.59□□□□□ -0.71
CDK9-203ENST00000480353 NXPH4O95158 308 aa10.58□□□□□ -0.72
CDK9-203ENST00000480353 GYPEP15421 78 aa10.58□□□□□ -0.72
CDK9-203ENST00000480353 FGF8P55075 233 aaPredicted RBP10.58□□□□□ -0.72
CDK9-203ENST00000480353 STOML3Q8TAV4 291 aa10.58□□□□□ -0.72
CDK9-203ENST00000480353 TXNDC17Q9BRA2 123 aa10.58□□□□□ -0.72
CDK9-203ENST00000480353 NKX6-2Q9C056 277 aaPredicted RBP10.58□□□□□ -0.72
CDK9-203ENST00000480353 DNAH17Q9UFH2 4485 aa10.57□□□□□ -0.72
CDK9-203ENST00000480353 PFN1P07737 140 aaKnown RBP10.57□□□□□ -0.72
CDK9-203ENST00000480353 S100A4P26447 101 aaKnown RBP10.57□□□□□ -0.72
CDK9-203ENST00000480353 DNAH2Q9P225 4427 aa10.57□□□□□ -0.72
CDK9-203ENST00000480353 TRAV9-2A0A087WT02 112 aa10.56□□□□□ -0.72
CDK9-203ENST00000480353 MAP1LC3B2A6NCE7 125 aa10.56□□□□□ -0.72
CDK9-203ENST00000480353 C16orf90A8MZG2 172 aa10.56□□□□□ -0.72
CDK9-203ENST00000480353 K7EQD1 137 aa10.56□□□□□ -0.72
CDK9-203ENST00000480353 ZNF876PQ49A33 203 aa10.56□□□□□ -0.72
CDK9-203ENST00000480353 NHLRC2Q8NBF2 726 aa10.56□□□□□ -0.72
CDK9-203ENST00000480353 MAP1LC3BQ9GZQ8 125 aa10.56□□□□□ -0.72
CDK9-203ENST00000480353 TRAV34A0A0B4J273 112 aa10.55□□□□□ -0.72
CDK9-203ENST00000480353 SMLR1H3BR10 107 aa10.55□□□□□ -0.72
CDK9-203ENST00000480353 PEX7O00628 323 aa10.55□□□□□ -0.72
CDK9-203ENST00000480353 BTF3P20290 206 aaKnown RBP10.55□□□□□ -0.72
CDK9-203ENST00000480353 ZNF80P51504 273 aaPredicted RBP10.55□□□□□ -0.72
CDK9-203ENST00000480353 UBE2G1P62253 170 aa10.55□□□□□ -0.72
CDK9-203ENST00000480353 ZNF726P1Q15940 193 aa10.55□□□□□ -0.72
CDK9-203ENST00000480353 LYPD5Q6UWN5 251 aa10.55□□□□□ -0.72
CDK9-203ENST00000480353 FAT2Q9NYQ8 4349 aa10.54□□□□□ -0.72
CDK9-203ENST00000480353 KANTRA0A1W2PQU2 76 aa10.54□□□□□ -0.72
CDK9-203ENST00000480353 CST9LP1Q5W188 147 aa10.54□□□□□ -0.72
CDK9-203ENST00000480353 SH2D6Q7Z4S9 175 aa10.54□□□□□ -0.72
CDK9-203ENST00000480353 ZNF575Q86XF7 245 aa10.54□□□□□ -0.72
CDK9-203ENST00000480353 HIST1H2BAQ96A08 127 aa10.54□□□□□ -0.72
CDK9-203ENST00000480353 PRADC1Q9BSG0 188 aa10.54□□□□□ -0.72
CDK9-203ENST00000480353 KRTAP1-5Q9BYS1 174 aa10.54□□□□□ -0.72
CDK9-203ENST00000480353 LY96Q9Y6Y9 160 aa10.54□□□□□ -0.72
CDK9-203ENST00000480353 ARL2-SNX15V9GYD0 113 aa10.54□□□□□ -0.72
CDK9-203ENST00000480353 FAM74A7A6NL05 159 aa10.53□□□□□ -0.72
CDK9-203ENST00000480353 FABP5P3A8MUU1 101 aa10.53□□□□□ -0.72
CDK9-203ENST00000480353 CIDEAO60543 219 aa10.53□□□□□ -0.72
CDK9-203ENST00000480353 IGLV2-11P01706 119 aa10.53□□□□□ -0.72
CDK9-203ENST00000480353 LINC00479Q96M42 142 aa10.53□□□□□ -0.72
CDK9-203ENST00000480353 A0A0D9SG52 128 aa10.52□□□□□ -0.73
CDK9-203ENST00000480353 G3V3Q6 166 aa10.52□□□□□ -0.73
CDK9-203ENST00000480353 EREGO14944 169 aa10.52□□□□□ -0.73
CDK9-203ENST00000480353 EVI2AP22794 236 aa10.52□□□□□ -0.73
CDK9-203ENST00000480353 ASIPP42127 132 aa10.52□□□□□ -0.73
CDK9-203ENST00000480353 LINC00315P59091 139 aa10.52□□□□□ -0.73
CDK9-203ENST00000480353 ZNF345Q14585 488 aa10.52□□□□□ -0.73
CDK9-203ENST00000480353 ZNF471Q9BX82 626 aaPredicted RBP10.52□□□□□ -0.73
CDK9-203ENST00000480353 IGHV3-73A0A0B4J1V6 119 aa10.51□□□□□ -0.73
CDK9-203ENST00000480353 PFDN1O60925 122 aa10.51□□□□□ -0.73
CDK9-203ENST00000480353 EIF5AP63241 154 aaKnown RBP10.51□□□□□ -0.73
CDK9-203ENST00000480353 RHOHQ15669 191 aa10.51□□□□□ -0.73
CDK9-203ENST00000480353 SPATA12Q7Z6I5 190 aa10.51□□□□□ -0.73
CDK9-203ENST00000480353 Q86TA4 180 aa10.51□□□□□ -0.73
CDK9-203ENST00000480353 NFE4Q86UQ8 179 aa10.51□□□□□ -0.73
CDK9-203ENST00000480353 KCNRGQ8N5I3 272 aa10.51□□□□□ -0.73
CDK9-203ENST00000480353 FMC1Q96HJ9 113 aa10.51□□□□□ -0.73
CDK9-203ENST00000480353 CYTL1Q9NRR1 136 aa10.51□□□□□ -0.73
CDK9-203ENST00000480353 C11orf21Q9P2W6 132 aa10.51□□□□□ -0.73
CDK9-203ENST00000480353 B4DEV8 164 aa10.5□□□□□ -0.73
CDK9-203ENST00000480353 GATA1P15976 413 aaPredicted RBP10.5□□□□□ -0.73
CDK9-203ENST00000480353 AKR1C3P42330 323 aa10.5□□□□□ -0.73
CDK9-203ENST00000480353 LGALSLQ3ZCW2 172 aaPredicted RBP10.5□□□□□ -0.73
CDK9-203ENST00000480353 ZNF506Q5JVG8 444 aa10.5□□□□□ -0.73
CDK9-203ENST00000480353 CFAP126Q5VTH2 177 aa10.5□□□□□ -0.73
CDK9-203ENST00000480353 FAM213BQ8TBF2 198 aa10.5□□□□□ -0.73
CDK9-203ENST00000480353 SFT2D1Q8WV19 159 aa10.5□□□□□ -0.73
CDK9-203ENST00000480353 C9orf85Q96MD7 179 aa10.5□□□□□ -0.73
CDK9-203ENST00000480353 TCEAL7Q9BRU2 100 aa10.5□□□□□ -0.73
CDK9-203ENST00000480353 ZFP30Q9Y2G7 519 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms