RNA–Protein interactions for RNA: ENST00000478603.5

C9orf3-216, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-216ENST00000478603 M0R2P5 195 aa15.54■□□□□ 0.08
C9orf3-216ENST00000478603 OR4C5Q8NGB2 326 aa15.54■□□□□ 0.08
C9orf3-216ENST00000478603 PCNPQ8WW12 178 aaKnown RBP15.54■□□□□ 0.08
C9orf3-216ENST00000478603 STAG3L2P0CL84 134 aa15.53■□□□□ 0.08
C9orf3-216ENST00000478603 STAG3L3P0CL85 134 aa15.53■□□□□ 0.08
C9orf3-216ENST00000478603 FUSP35637 526 aaKnown RBP eCLIP15.53■□□□□ 0.08
C9orf3-216ENST00000478603 WFDC10BQ8IUB3 73 aa15.53■□□□□ 0.08
C9orf3-216ENST00000478603 OR2G3Q8NGZ4 309 aa15.53■□□□□ 0.08
C9orf3-216ENST00000478603 RAB24Q969Q5 203 aa15.53■□□□□ 0.08
C9orf3-216ENST00000478603 LOC100131303A0A0U1RQF7 123 aa15.52■□□□□ 0.08
C9orf3-216ENST00000478603 ATP6V0CP27449 155 aa15.52■□□□□ 0.08
C9orf3-216ENST00000478603 SDF2L1Q9HCN8 221 aa15.52■□□□□ 0.08
C9orf3-216ENST00000478603 LY96Q9Y6Y9 160 aa15.52■□□□□ 0.08
C9orf3-216ENST00000478603 ORM1P02763 201 aa15.51■□□□□ 0.07
C9orf3-216ENST00000478603 GCHFRP30047 84 aa15.51■□□□□ 0.07
C9orf3-216ENST00000478603 Q5BKY6 102 aa15.51■□□□□ 0.07
C9orf3-216ENST00000478603 AQP10Q96PS8 301 aa15.51■□□□□ 0.07
C9orf3-216ENST00000478603 MED28Q9H204 178 aa15.51■□□□□ 0.07
C9orf3-216ENST00000478603 TCRAP04437 139 aa15.5■□□□□ 0.07
C9orf3-216ENST00000478603 ZNF80P51504 273 aaPredicted RBP15.5■□□□□ 0.07
C9orf3-216ENST00000478603 ASB13Q8WXK3 278 aa15.5■□□□□ 0.07
C9orf3-216ENST00000478603 KCNS1Q96KK3 526 aa15.5■□□□□ 0.07
C9orf3-216ENST00000478603 PSMG3Q9BT73 122 aaPredicted RBP15.5■□□□□ 0.07
C9orf3-216ENST00000478603 SH3BGRL3Q9H299 93 aa15.5■□□□□ 0.07
C9orf3-216ENST00000478603 C9JCJ5 164 aa15.49■□□□□ 0.07
C9orf3-216ENST00000478603 C5orf17Q8NAS9 161 aa15.49■□□□□ 0.07
C9orf3-216ENST00000478603 TXNDC17Q9BRA2 123 aa15.49■□□□□ 0.07
C9orf3-216ENST00000478603 NDFIP1Q9BT67 221 aa15.49■□□□□ 0.07
C9orf3-216ENST00000478603 BATF3Q9NR55 127 aa15.49■□□□□ 0.07
C9orf3-216ENST00000478603 C11orf21Q9P2W6 132 aa15.49■□□□□ 0.07
C9orf3-216ENST00000478603 PTTG1O95997 202 aa15.48■□□□□ 0.07
C9orf3-216ENST00000478603 ERVFC1-1P60608 527 aa15.48■□□□□ 0.07
C9orf3-216ENST00000478603 SUN5Q8TC36 379 aa15.48■□□□□ 0.07
C9orf3-216ENST00000478603 PSG8Q9UQ74 426 aa15.48■□□□□ 0.07
C9orf3-216ENST00000478603 TRAV9-2A0A087WT02 112 aa15.47■□□□□ 0.07
C9orf3-216ENST00000478603 SERTM2A0A1B0GWG4 89 aa15.47■□□□□ 0.07
C9orf3-216ENST00000478603 DNAH10OSP0CZ25 163 aa15.47■□□□□ 0.07
C9orf3-216ENST00000478603 SUMO1P63165 101 aaKnown RBP15.47■□□□□ 0.07
C9orf3-216ENST00000478603 NFE4Q86UQ8 179 aa15.47■□□□□ 0.07
C9orf3-216ENST00000478603 Q8N1X5 172 aa15.47■□□□□ 0.07
C9orf3-216ENST00000478603 TMEM75Q8N9X5 138 aa15.47■□□□□ 0.07
C9orf3-216ENST00000478603 GGTLC3B5MD39 225 aa15.46■□□□□ 0.07
C9orf3-216ENST00000478603 GCGP01275 180 aa15.46■□□□□ 0.07
C9orf3-216ENST00000478603 IGLV2-11P01706 119 aa15.46■□□□□ 0.07
C9orf3-216ENST00000478603 GATA1P15976 413 aaPredicted RBP15.46■□□□□ 0.07
C9orf3-216ENST00000478603 SERF2P84101 59 aa15.46■□□□□ 0.07
C9orf3-216ENST00000478603 NHLRC2Q8NBF2 726 aa15.46■□□□□ 0.07
C9orf3-216ENST00000478603 SCRT2Q9NQ03 307 aa15.46■□□□□ 0.07
C9orf3-216ENST00000478603 K7EQM0 130 aa15.45■□□□□ 0.06
C9orf3-216ENST00000478603 EREGO14944 169 aa15.45■□□□□ 0.06
C9orf3-216ENST00000478603 MBP02144 154 aa15.45■□□□□ 0.06
C9orf3-216ENST00000478603 EVI2AP22794 236 aa15.45■□□□□ 0.06
C9orf3-216ENST00000478603 DPPA3Q6W0C5 159 aa15.45■□□□□ 0.06
C9orf3-216ENST00000478603 PRNTQ86SH4 94 aa15.45■□□□□ 0.06
C9orf3-216ENST00000478603 MSRB1Q9NZV6 116 aa15.45■□□□□ 0.06
C9orf3-216ENST00000478603 EPDR1Q9UM22 224 aa15.45■□□□□ 0.06
C9orf3-216ENST00000478603 FBLL1A6NHQ2 334 aaKnown RBP15.44■□□□□ 0.06
C9orf3-216ENST00000478603 TAAR5O14804 337 aa15.44■□□□□ 0.06
C9orf3-216ENST00000478603 CXorf1O96002 111 aa15.44■□□□□ 0.06
C9orf3-216ENST00000478603 FLI1Q01543 452 aaPredicted RBP15.44■□□□□ 0.06
C9orf3-216ENST00000478603 ZNF876PQ49A33 203 aa15.44■□□□□ 0.06
C9orf3-216ENST00000478603 ACTR3CQ9C0K3 210 aaPredicted RBP15.44■□□□□ 0.06
C9orf3-216ENST00000478603 TMEM167BQ9NRX6 74 aa15.44■□□□□ 0.06
C9orf3-216ENST00000478603 PGPEP1Q9NXJ5 209 aa15.44■□□□□ 0.06
C9orf3-216ENST00000478603 A0A087WTM6 91 aa15.43■□□□□ 0.06
C9orf3-216ENST00000478603 RPL7L1Q6DKI1 246 aaKnown RBP15.43■□□□□ 0.06
C9orf3-216ENST00000478603 TNFSF18Q9UNG2 199 aa15.43■□□□□ 0.06
C9orf3-216ENST00000478603 IGHV3-73A0A0B4J1V6 119 aa15.42■□□□□ 0.06
C9orf3-216ENST00000478603 RNF222A6NCQ9 220 aa15.42■□□□□ 0.06
C9orf3-216ENST00000478603 RS1O15537 224 aa15.42■□□□□ 0.06
C9orf3-216ENST00000478603 CRYGDP07320 174 aa15.42■□□□□ 0.06
C9orf3-216ENST00000478603 PFN1P07737 140 aaKnown RBP15.42■□□□□ 0.06
C9orf3-216ENST00000478603 GIPP09681 153 aaPredicted RBP15.42■□□□□ 0.06
C9orf3-216ENST00000478603 SMUG1Q53HV7 270 aa15.42■□□□□ 0.06
C9orf3-216ENST00000478603 CFAP126Q5VTH2 177 aa15.42■□□□□ 0.06
C9orf3-216ENST00000478603 CYB561D1Q8N8Q1 229 aa15.42■□□□□ 0.06
C9orf3-216ENST00000478603 SLC25A29Q8N8R3 303 aa15.42■□□□□ 0.06
C9orf3-216ENST00000478603 C9orf85Q96MD7 179 aa15.42■□□□□ 0.06
C9orf3-216ENST00000478603 PPT1P50897 306 aa15.41■□□□□ 0.06
C9orf3-216ENST00000478603 ZFP69Q49AA0 526 aa15.41■□□□□ 0.06
C9orf3-216ENST00000478603 SH2D6Q7Z4S9 175 aa15.41■□□□□ 0.06
C9orf3-216ENST00000478603 INO80EQ8NBZ0 244 aaPredicted RBP15.41■□□□□ 0.06
C9orf3-216ENST00000478603 LINC00479Q96M42 142 aa15.41■□□□□ 0.06
C9orf3-216ENST00000478603 FXYD6-FXYD2A0A087WZ82 144 aa15.4■□□□□ 0.06
C9orf3-216ENST00000478603 TRAV34A0A0B4J273 112 aa15.4■□□□□ 0.06
C9orf3-216ENST00000478603 PGPEP1LA6NFU8 196 aa15.4■□□□□ 0.06
C9orf3-216ENST00000478603 K7EP13 123 aa15.4■□□□□ 0.06
C9orf3-216ENST00000478603 ZNF726P1Q15940 193 aa15.4■□□□□ 0.06
C9orf3-216ENST00000478603 RNASE3P12724 160 aaKnown RBP15.39■□□□□ 0.05
C9orf3-216ENST00000478603 ZNF506Q5JVG8 444 aa15.39■□□□□ 0.05
C9orf3-216ENST00000478603 BORCS7-ASMTA0A0B4J1R7 106 aa15.38■□□□□ 0.05
C9orf3-216ENST00000478603 IGHV3-38A0A0C4DH36 116 aa15.38■□□□□ 0.05
C9orf3-216ENST00000478603 A0A1W2PRE2 83 aa15.38■□□□□ 0.05
C9orf3-216ENST00000478603 TIRAPP58753 221 aa15.38■□□□□ 0.05
C9orf3-216ENST00000478603 UBE2G2P60604 165 aa15.38■□□□□ 0.05
C9orf3-216ENST00000478603 CDPF1Q6NVV7 123 aa15.38■□□□□ 0.05
C9orf3-216ENST00000478603 C10orf126Q8N4M7 172 aa15.38■□□□□ 0.05
C9orf3-216ENST00000478603 PRADC1Q9BSG0 188 aa15.38■□□□□ 0.05
C9orf3-216ENST00000478603 RHOHQ15669 191 aa15.37■□□□□ 0.05
C9orf3-216ENST00000478603 SAPCD1Q5SSQ6 148 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms