RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 Q5PR19 223 aa9.25□□□□□ -0.93
PTPRF-212ENST00000477970 RHPN1-AS1Q9BWJ2 59 aa9.25□□□□□ -0.93
PTPRF-212ENST00000477970 SCRT2Q9NQ03 307 aa9.25□□□□□ -0.93
PTPRF-212ENST00000477970 SMIM15Q7Z3B0 74 aa9.24□□□□□ -0.93
PTPRF-212ENST00000477970 TCAPO15273 167 aa9.24□□□□□ -0.93
PTPRF-212ENST00000477970 IGHV3-11P01762 117 aa9.24□□□□□ -0.93
PTPRF-212ENST00000477970 PRR9Q5T870 116 aa9.24□□□□□ -0.93
PTPRF-212ENST00000477970 PMCHL2Q9BQD1 86 aa9.24□□□□□ -0.93
PTPRF-212ENST00000477970 CSMD2Q7Z408 3487 aa9.24□□□□□ -0.93
PTPRF-212ENST00000477970 IGHV4-59P01825 116 aa9.23□□□□□ -0.93
PTPRF-212ENST00000477970 RNF152Q8N8N0 203 aa9.23□□□□□ -0.93
PTPRF-212ENST00000477970 OR8A1Q8NGG7 326 aa9.23□□□□□ -0.93
PTPRF-212ENST00000477970 TNFRSF6BO95407 300 aa9.23□□□□□ -0.93
PTPRF-212ENST00000477970 PSMG4Q5JS54 123 aa9.23□□□□□ -0.93
PTPRF-212ENST00000477970 Q6YL49 198 aa9.23□□□□□ -0.93
PTPRF-212ENST00000477970 MRAP2Q96G30 205 aa9.23□□□□□ -0.93
PTPRF-212ENST00000477970 ODF3Q96PU9 254 aa9.23□□□□□ -0.93
PTPRF-212ENST00000477970 VPREB3Q9UKI3 123 aa9.23□□□□□ -0.93
PTPRF-212ENST00000477970 CR1P17927 2039 aa9.23□□□□□ -0.93
PTPRF-212ENST00000477970 LOC389332A0A1B0GUA5 103 aa9.23□□□□□ -0.93
PTPRF-212ENST00000477970 GAGE1Q13065 139 aa9.23□□□□□ -0.93
PTPRF-212ENST00000477970 Q8N8P6 123 aa9.23□□□□□ -0.93
PTPRF-212ENST00000477970 OR1N2Q8NGR9 330 aa9.23□□□□□ -0.93
PTPRF-212ENST00000477970 IGLV2-18A0A075B6J9 118 aa9.22□□□□□ -0.93
PTPRF-212ENST00000477970 MUC21A0A0G2JKD1 596 aa9.22□□□□□ -0.93
PTPRF-212ENST00000477970 MUC21A0A140T8X8 626 aa9.22□□□□□ -0.93
PTPRF-212ENST00000477970 IGHV4-31P0DP07 118 aa9.22□□□□□ -0.93
PTPRF-212ENST00000477970 MUC21Q5SSG8 566 aa9.22□□□□□ -0.93
PTPRF-212ENST00000477970 LGALS9O00182 355 aa9.22□□□□□ -0.93
PTPRF-212ENST00000477970 FCER1GP30273 86 aa9.22□□□□□ -0.93
PTPRF-212ENST00000477970 ID1P41134 155 aa9.22□□□□□ -0.93
PTPRF-212ENST00000477970 SMKR1H3BMG3 65 aa9.21□□□□□ -0.93
PTPRF-212ENST00000477970 ELANEP08246 267 aa9.21□□□□□ -0.93
PTPRF-212ENST00000477970 TM4SF20Q53R12 229 aa9.21□□□□□ -0.93
PTPRF-212ENST00000477970 NRACQ8N912 160 aa9.21□□□□□ -0.93
PTPRF-212ENST00000477970 DCANP1Q8TF63 244 aa9.21□□□□□ -0.93
PTPRF-212ENST00000477970 NAV2Q8IVL1 2488 aa9.21□□□□□ -0.93
PTPRF-212ENST00000477970 NCR2O95944 276 aa9.21□□□□□ -0.93
PTPRF-212ENST00000477970 SLC25A34Q6PIV7 304 aa9.21□□□□□ -0.93
PTPRF-212ENST00000477970 WFDC11Q8NEX6 87 aa9.21□□□□□ -0.93
PTPRF-212ENST00000477970 OR2K2Q8NGT1 345 aa9.21□□□□□ -0.93
PTPRF-212ENST00000477970 hDV102S1A0JD36 115 aa9.21□□□□□ -0.94
PTPRF-212ENST00000477970 KLLNB2CW77 178 aa9.21□□□□□ -0.94
PTPRF-212ENST00000477970 NXPH4O95158 308 aa9.21□□□□□ -0.94
PTPRF-212ENST00000477970 KIR3DS1Q14943 382 aa9.21□□□□□ -0.94
PTPRF-212ENST00000477970 POM121L12Q8N7R1 296 aa9.21□□□□□ -0.94
PTPRF-212ENST00000477970 TGFAP01135 160 aa9.2□□□□□ -0.94
PTPRF-212ENST00000477970 IFI27L1Q96BM0 104 aa9.2□□□□□ -0.94
PTPRF-212ENST00000477970 CSMD1Q96PZ7 3565 aa9.2□□□□□ -0.94
PTPRF-212ENST00000477970 Q96MF0 132 aa9.2□□□□□ -0.94
PTPRF-212ENST00000477970 K7EMI3 77 aa9.2□□□□□ -0.94
PTPRF-212ENST00000477970 COX8AP10176 69 aa9.2□□□□□ -0.94
PTPRF-212ENST00000477970 ASIPP42127 132 aa9.2□□□□□ -0.94
PTPRF-212ENST00000477970 Q8N2B8 174 aa9.2□□□□□ -0.94
PTPRF-212ENST00000477970 GOLT1BQ9Y3E0 138 aa9.2□□□□□ -0.94
PTPRF-212ENST00000477970 MYO9AB2RTY4 2548 aa9.19□□□□□ -0.94
PTPRF-212ENST00000477970 M0R381 172 aa9.19□□□□□ -0.94
PTPRF-212ENST00000477970 LGALS1P09382 135 aaKnown RBP9.19□□□□□ -0.94
PTPRF-212ENST00000477970 SPANXN1Q5VSR9 72 aa9.19□□□□□ -0.94
PTPRF-212ENST00000477970 ZNF702PQ9H963 129 aa9.19□□□□□ -0.94
PTPRF-212ENST00000477970 TMEM238LA0A1B0GVL6 79 aa9.19□□□□□ -0.94
PTPRF-212ENST00000477970 EVI2AP22794 236 aa9.19□□□□□ -0.94
PTPRF-212ENST00000477970 LCNL1Q6ZST4 164 aa9.18□□□□□ -0.94
PTPRF-212ENST00000477970 STPG4Q8N801 248 aa9.18□□□□□ -0.94
PTPRF-212ENST00000477970 UBE2E2Q96LR5 201 aa9.18□□□□□ -0.94
PTPRF-212ENST00000477970 ZMAT4Q9H898 229 aa9.18□□□□□ -0.94
PTPRF-212ENST00000477970 H3BVH4 76 aa9.18□□□□□ -0.94
PTPRF-212ENST00000477970 POLQO75417 2590 aa9.18□□□□□ -0.94
PTPRF-212ENST00000477970 DLEU1O43261 78 aa9.18□□□□□ -0.94
PTPRF-212ENST00000477970 GAS8-AS1O95177 125 aa9.18□□□□□ -0.94
PTPRF-212ENST00000477970 TMEM95Q3KNT9 176 aa9.18□□□□□ -0.94
PTPRF-212ENST00000477970 Q6ZQT7 251 aa9.17□□□□□ -0.94
PTPRF-212ENST00000477970 C20orf78Q9BR46 151 aa9.17□□□□□ -0.94
PTPRF-212ENST00000477970 DPH3P1Q9H4G8 78 aa9.17□□□□□ -0.94
PTPRF-212ENST00000477970 MED13LQ71F56 2210 aa9.17□□□□□ -0.94
PTPRF-212ENST00000477970 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.17□□□□□ -0.945e-7■■■□□ 17.4
PTPRF-212ENST00000477970 RNF223E7ERA6 249 aa9.17□□□□□ -0.94
PTPRF-212ENST00000477970 ANXA2RQ3ZCQ2 193 aa9.17□□□□□ -0.94
PTPRF-212ENST00000477970 LEPP41159 167 aa9.16□□□□□ -0.94
PTPRF-212ENST00000477970 RPL11P62913 178 aaKnown RBP9.16□□□□□ -0.94
PTPRF-212ENST00000477970 ZNF124Q15973 351 aa9.16□□□□□ -0.94
PTPRF-212ENST00000477970 BATFQ16520 125 aa9.16□□□□□ -0.94
PTPRF-212ENST00000477970 ATP5LO75964 103 aa9.16□□□□□ -0.94
PTPRF-212ENST00000477970 PPP1R17O96001 155 aa9.16□□□□□ -0.94
PTPRF-212ENST00000477970 TMEM208Q9BTX3 173 aa9.16□□□□□ -0.94
PTPRF-212ENST00000477970 K7EQG2 157 aa9.16□□□□□ -0.94
PTPRF-212ENST00000477970 LAGE3Q14657 143 aa9.16□□□□□ -0.94
PTPRF-212ENST00000477970 C12orf54Q6X4T0 127 aa9.16□□□□□ -0.94
PTPRF-212ENST00000477970 ORAOV1Q8WV07 137 aa9.16□□□□□ -0.94
PTPRF-212ENST00000477970 SIVA1O15304 175 aa9.15□□□□□ -0.94
PTPRF-212ENST00000477970 FGF6P10767 208 aa9.15□□□□□ -0.94
PTPRF-212ENST00000477970 RNASE3P12724 160 aaKnown RBP9.15□□□□□ -0.94
PTPRF-212ENST00000477970 ZNF25P17030 456 aaPredicted RBP9.15□□□□□ -0.94
PTPRF-212ENST00000477970 RNASE4P34096 147 aaKnown RBP9.15□□□□□ -0.94
PTPRF-212ENST00000477970 RPL32P62910 135 aaKnown RBP9.15□□□□□ -0.94
PTPRF-212ENST00000477970 VPS13CQ709C8 3753 aa9.15□□□□□ -0.94
PTPRF-212ENST00000477970 TEX29Q8N6K0 151 aa9.15□□□□□ -0.94
PTPRF-212ENST00000477970 ZFHX3Q15911 3703 aa9.15□□□□□ -0.94
PTPRF-212ENST00000477970 H0Y8G0 127 aa9.15□□□□□ -0.95
PTPRF-212ENST00000477970 GATA1P15976 413 aaPredicted RBP9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms