RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 B4DSR2 109 aa1.65□□□□□ -2.15
SMNDC1-205ENST00000477763 ZNF736B4DX44 427 aaPredicted RBP1.65□□□□□ -2.15
SMNDC1-205ENST00000477763 E7EUB6 86 aa1.65□□□□□ -2.15
SMNDC1-205ENST00000477763 M0R129 80 aa1.65□□□□□ -2.15
SMNDC1-205ENST00000477763 PITX3O75364 302 aa1.65□□□□□ -2.15
SMNDC1-205ENST00000477763 CRPP02741 224 aa1.65□□□□□ -2.15
SMNDC1-205ENST00000477763 Q56UQ5 140 aa1.65□□□□□ -2.15
SMNDC1-205ENST00000477763 C1orf134Q5TEV5 83 aa1.65□□□□□ -2.15
SMNDC1-205ENST00000477763 SMIM5Q71RC9 77 aa1.65□□□□□ -2.15
SMNDC1-205ENST00000477763 GKN2Q86XP6 184 aa1.65□□□□□ -2.15
SMNDC1-205ENST00000477763 SNX29P2Q8IUI4 249 aa1.65□□□□□ -2.15
SMNDC1-205ENST00000477763 OR2T35Q8NGX2 323 aa1.65□□□□□ -2.15
SMNDC1-205ENST00000477763 ATP6V0E2Q8NHE4 81 aa1.65□□□□□ -2.15
SMNDC1-205ENST00000477763 MUCL1Q96DR8 90 aa1.65□□□□□ -2.15
SMNDC1-205ENST00000477763 ZNF625Q96I27 306 aaPredicted RBP1.65□□□□□ -2.15
SMNDC1-205ENST00000477763 SEC11CQ9BY50 192 aa1.65□□□□□ -2.15
SMNDC1-205ENST00000477763 TAS2R8Q9NYW2 309 aa1.65□□□□□ -2.15
SMNDC1-205ENST00000477763 CHCHD2Q9Y6H1 151 aaPredicted RBP1.65□□□□□ -2.15
SMNDC1-205ENST00000477763 SERP1Q9Y6X1 66 aa1.65□□□□□ -2.15
SMNDC1-205ENST00000477763 PLXND1Q9Y4D7 1925 aa1.65□□□□□ -2.15
SMNDC1-205ENST00000477763 ECM29Q5VYK3 1845 aa1.65□□□□□ -2.15
SMNDC1-205ENST00000477763 KIAA0556O60303 1618 aa1.65□□□□□ -2.15
SMNDC1-205ENST00000477763 ABCC1P33527 1531 aa1.65□□□□□ -2.15
SMNDC1-205ENST00000477763 SORL1Q92673 2214 aa1.64□□□□□ -2.15
SMNDC1-205ENST00000477763 ROBO1Q9Y6N7 1651 aa1.64□□□□□ -2.15
SMNDC1-205ENST00000477763 MED14O60244 1454 aa1.64□□□□□ -2.15
SMNDC1-205ENST00000477763 KTN1Q86UP2 1357 aaKnown RBP1.64□□□□□ -2.15
SMNDC1-205ENST00000477763 PHLPP1O60346 1717 aa1.64□□□□□ -2.15
SMNDC1-205ENST00000477763 MPDZO75970 2070 aa1.64□□□□□ -2.15
SMNDC1-205ENST00000477763 TRAV1-1A0A0B4J248 108 aa1.64□□□□□ -2.15
SMNDC1-205ENST00000477763 ZNF705FA8MVS1 300 aaPredicted RBP1.64□□□□□ -2.15
SMNDC1-205ENST00000477763 IBA57-AS1B1ANH7 110 aa1.64□□□□□ -2.15
SMNDC1-205ENST00000477763 GEMIN2O14893 280 aaKnown RBP1.64□□□□□ -2.15
SMNDC1-205ENST00000477763 KLF7O75840 302 aaPredicted RBP1.64□□□□□ -2.15
SMNDC1-205ENST00000477763 UBL3O95164 117 aa1.64□□□□□ -2.15
SMNDC1-205ENST00000477763 CATR1Q13166 79 aa1.64□□□□□ -2.15
SMNDC1-205ENST00000477763 NCMAPQ5T1S8 102 aa1.64□□□□□ -2.15
SMNDC1-205ENST00000477763 ARPINQ7Z6K5 226 aa1.64□□□□□ -2.15
SMNDC1-205ENST00000477763 ZNF563Q8TA94 476 aa1.64□□□□□ -2.15
SMNDC1-205ENST00000477763 SPACA4Q8TDM5 124 aa1.64□□□□□ -2.15
SMNDC1-205ENST00000477763 KRTAP4-1Q9BYQ7 146 aa1.64□□□□□ -2.15
SMNDC1-205ENST00000477763 CST11Q9H112 138 aa1.64□□□□□ -2.15
SMNDC1-205ENST00000477763 LHFPL6Q9Y693 200 aa1.64□□□□□ -2.15
SMNDC1-205ENST00000477763 FER1L6Q2WGJ9 1857 aa1.64□□□□□ -2.15
SMNDC1-205ENST00000477763 PCNTO95613 3336 aa1.64□□□□□ -2.15
SMNDC1-205ENST00000477763 ADGRB1O14514 1584 aa1.64□□□□□ -2.15
SMNDC1-205ENST00000477763 MLH3Q9UHC1 1453 aa1.63□□□□□ -2.15
SMNDC1-205ENST00000477763 SUPT6HQ7KZ85 1726 aaKnown RBP1.63□□□□□ -2.15
SMNDC1-205ENST00000477763 EFCAB5A4FU69 1503 aa1.63□□□□□ -2.15
SMNDC1-205ENST00000477763 CDK13Q14004 1512 aaKnown RBP1.63□□□□□ -2.15
SMNDC1-205ENST00000477763 ZMYM4Q5VZL5 1548 aa1.63□□□□□ -2.15
SMNDC1-205ENST00000477763 TRGV2A0A075B6R0 118 aa1.63□□□□□ -2.15
SMNDC1-205ENST00000477763 IGHV1-24A0A0C4DH33 117 aa1.63□□□□□ -2.15
SMNDC1-205ENST00000477763 APOC4-APOC2K7ER74 178 aa1.63□□□□□ -2.15
SMNDC1-205ENST00000477763 APOC2P02655 101 aa1.63□□□□□ -2.15
SMNDC1-205ENST00000477763 SSR2P43308 183 aa1.63□□□□□ -2.15
SMNDC1-205ENST00000477763 ZNF846Q147U1 533 aa1.63□□□□□ -2.15
SMNDC1-205ENST00000477763 COL5A1-AS1Q5SY13 56 aa1.63□□□□□ -2.15
SMNDC1-205ENST00000477763 COA5Q86WW8 74 aa1.63□□□□□ -2.15
SMNDC1-205ENST00000477763 LINC00269Q8N2A0 174 aa1.63□□□□□ -2.15
SMNDC1-205ENST00000477763 TMEM254Q8TBM7 123 aa1.63□□□□□ -2.15
SMNDC1-205ENST00000477763 SFT2D1Q8WV19 159 aa1.63□□□□□ -2.15
SMNDC1-205ENST00000477763 LINC00526Q96FQ7 95 aa1.63□□□□□ -2.15
SMNDC1-205ENST00000477763 CLTCQ00610 1675 aaKnown RBP1.63□□□□□ -2.15
SMNDC1-205ENST00000477763 BLMP54132 1417 aaPredicted RBP1.63□□□□□ -2.15
SMNDC1-205ENST00000477763 DIP2CQ9Y2E4 1556 aa1.63□□□□□ -2.15
SMNDC1-205ENST00000477763 CEP170BQ9Y4F5 1589 aaPredicted RBP1.63□□□□□ -2.15
SMNDC1-205ENST00000477763 NCOA2Q15596 1464 aa1.63□□□□□ -2.15
SMNDC1-205ENST00000477763 CDK12Q9NYV4 1490 aaPredicted RBP1.63□□□□□ -2.15
SMNDC1-205ENST00000477763 BIVM-ERCC5R4GMW8 1640 aa1.62□□□□□ -2.15
SMNDC1-205ENST00000477763 DOCK10Q96BY6 2186 aa1.62□□□□□ -2.15
SMNDC1-205ENST00000477763 MAP3K1Q13233 1512 aa1.62□□□□□ -2.15
SMNDC1-205ENST00000477763 TRAV12-1A0A0B4J245 112 aa1.62□□□□□ -2.15
SMNDC1-205ENST00000477763 IGKV2-29A2NJV5 120 aaPredicted RBP1.62□□□□□ -2.15
SMNDC1-205ENST00000477763 MCRIP1C9JLW8 97 aa1.62□□□□□ -2.15
SMNDC1-205ENST00000477763 ASAH2BP0C7U1 165 aa1.62□□□□□ -2.15
SMNDC1-205ENST00000477763 IFITM1P13164 125 aa1.62□□□□□ -2.15
SMNDC1-205ENST00000477763 MIC13Q5XKP0 118 aa1.62□□□□□ -2.15
SMNDC1-205ENST00000477763 Q6AWC8 147 aa1.62□□□□□ -2.15
SMNDC1-205ENST00000477763 MRPL54Q6P161 138 aaKnown RBP1.62□□□□□ -2.15
SMNDC1-205ENST00000477763 FOXI2Q6ZQN5 318 aa1.62□□□□□ -2.15
SMNDC1-205ENST00000477763 Q6ZRN7 208 aaPredicted RBP1.62□□□□□ -2.15
SMNDC1-205ENST00000477763 FAM19A2Q8N3H0 131 aa1.62□□□□□ -2.15
SMNDC1-205ENST00000477763 TTC9CQ8N5M4 171 aa1.62□□□□□ -2.15
SMNDC1-205ENST00000477763 C9orf163Q8N9P6 203 aa1.62□□□□□ -2.15
SMNDC1-205ENST00000477763 PLPP5Q8NEB5 264 aa1.62□□□□□ -2.15
SMNDC1-205ENST00000477763 VSTM2AQ8TAG5 236 aa1.62□□□□□ -2.15
SMNDC1-205ENST00000477763 SMIM7Q9BQ49 75 aa1.62□□□□□ -2.15
SMNDC1-205ENST00000477763 NOP16Q9Y3C1 178 aaKnown RBP1.62□□□□□ -2.15
SMNDC1-205ENST00000477763 PPIP5K1Q6PFW1 1433 aa1.62□□□□□ -2.15
SMNDC1-205ENST00000477763 OBSL1O75147 1896 aa1.62□□□□□ -2.15
SMNDC1-205ENST00000477763 NUP210LQ5VU65 1888 aa1.62□□□□□ -2.15
SMNDC1-205ENST00000477763 ANKRD31Q8N7Z5 1873 aa1.62□□□□□ -2.15
SMNDC1-205ENST00000477763 RALGAPBQ86X10 1494 aa1.62□□□□□ -2.15
SMNDC1-205ENST00000477763 ABCA6Q8N139 1617 aa1.62□□□□□ -2.15
SMNDC1-205ENST00000477763 RNF17Q9BXT8 1623 aaKnown RBP1.62□□□□□ -2.15
SMNDC1-205ENST00000477763 ARHGAP32A7KAX9 2087 aa1.62□□□□□ -2.15
SMNDC1-205ENST00000477763 NUP98P52948 1817 aa1.61□□□□□ -2.15
SMNDC1-205ENST00000477763 AGLP35573 1532 aa1.61□□□□□ -2.15
SMNDC1-205ENST00000477763 MAST1Q9Y2H9 1570 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms