RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 TDRG1Q3Y452 100 aa10.29□□□□□ -0.76
CCNL1-217ENST00000476367 MUC21Q5SSG8 566 aa10.29□□□□□ -0.76
CCNL1-217ENST00000476367 FAM222AQ5U5X8 452 aa10.29□□□□□ -0.76
CCNL1-217ENST00000476367 C11orf72Q8NBR9 251 aa10.29□□□□□ -0.76
CCNL1-217ENST00000476367 TMEM263Q8WUH6 116 aaKnown RBP10.29□□□□□ -0.76
CCNL1-217ENST00000476367 C16orf74Q96GX8 76 aa10.29□□□□□ -0.76
CCNL1-217ENST00000476367 STARD9Q9P2P6 4700 aa10.28□□□□□ -0.76
CCNL1-217ENST00000476367 C9JCJ5 164 aa10.28□□□□□ -0.76
CCNL1-217ENST00000476367 OCC1Q8TAD7 63 aa10.28□□□□□ -0.76
CCNL1-217ENST00000476367 SMDT1Q9H4I9 107 aa10.28□□□□□ -0.76
CCNL1-217ENST00000476367 DKK2Q9UBU2 259 aa10.28□□□□□ -0.76
CCNL1-217ENST00000476367 IGHV1OR15-1A0A075B7D0 117 aa10.27□□□□□ -0.77
CCNL1-217ENST00000476367 TRAV21A0A0B4J279 112 aa10.27□□□□□ -0.77
CCNL1-217ENST00000476367 SH2D1AO60880 128 aa10.27□□□□□ -0.77
CCNL1-217ENST00000476367 SPART-AS1P0CW21 52 aa10.27□□□□□ -0.77
CCNL1-217ENST00000476367 PEA15Q15121 130 aa10.27□□□□□ -0.77
CCNL1-217ENST00000476367 ANXA2RQ3ZCQ2 193 aa10.27□□□□□ -0.77
CCNL1-217ENST00000476367 Q6ZTC4 211 aa10.27□□□□□ -0.77
CCNL1-217ENST00000476367 PHLDA1Q8WV24 401 aaPredicted RBP10.27□□□□□ -0.77
CCNL1-217ENST00000476367 NAGKQ9UJ70 344 aa10.27□□□□□ -0.77
CCNL1-217ENST00000476367 C19orf71A6NCJ1 209 aa10.26□□□□□ -0.77
CCNL1-217ENST00000476367 CBY3A6NI87 242 aa10.26□□□□□ -0.77
CCNL1-217ENST00000476367 GNRH2O43555 120 aa10.26□□□□□ -0.77
CCNL1-217ENST00000476367 GNG4P50150 75 aa10.26□□□□□ -0.77
CCNL1-217ENST00000476367 CEBPGP53567 150 aa10.26□□□□□ -0.77
CCNL1-217ENST00000476367 OR5I1Q13606 314 aa10.26□□□□□ -0.77
CCNL1-217ENST00000476367 MDFICQ9P1T7 246 aa10.26□□□□□ -0.77
CCNL1-217ENST00000476367 KMT2CQ8NEZ4 4911 aaKnown RBP10.26□□□□□ -0.77
CCNL1-217ENST00000476367 TENM2Q9NT68 2774 aa10.26□□□□□ -0.77
CCNL1-217ENST00000476367 FABP5P3A8MUU1 101 aa10.25□□□□□ -0.77
CCNL1-217ENST00000476367 C12orf74Q32Q52 190 aa10.25□□□□□ -0.77
CCNL1-217ENST00000476367 ZNF493Q6ZR52 646 aa10.25□□□□□ -0.77
CCNL1-217ENST00000476367 EIF4E3Q8N5X7 224 aaKnown RBP10.25□□□□□ -0.77
CCNL1-217ENST00000476367 SMIM12Q96EX1 92 aa10.25□□□□□ -0.77
CCNL1-217ENST00000476367 SMIM7Q9BQ49 75 aa10.25□□□□□ -0.77
CCNL1-217ENST00000476367 NACAE9PAV3 2078 aa10.25□□□□□ -0.77
CCNL1-217ENST00000476367 TEX48A0A1B0GUV7 120 aa10.25□□□□□ -0.77
CCNL1-217ENST00000476367 NUPR2A6NF83 97 aa10.25□□□□□ -0.77
CCNL1-217ENST00000476367 SNURFLB1AK76 121 aa10.25□□□□□ -0.77
CCNL1-217ENST00000476367 TYMSP04818 313 aa10.25□□□□□ -0.77
CCNL1-217ENST00000476367 FAM162BQ5T6X4 162 aa10.25□□□□□ -0.77
CCNL1-217ENST00000476367 NOP10Q9NPE3 64 aaKnown RBP10.25□□□□□ -0.77
CCNL1-217ENST00000476367 KRBOX1C9JBD0 128 aa10.24□□□□□ -0.77
CCNL1-217ENST00000476367 ADCYAP1P18509 176 aa10.24□□□□□ -0.77
CCNL1-217ENST00000476367 DAD1P61803 113 aa10.24□□□□□ -0.77
CCNL1-217ENST00000476367 RPL19P84098 196 aaKnown RBP10.24□□□□□ -0.77
CCNL1-217ENST00000476367 LINC01551Q86U37 167 aa10.24□□□□□ -0.77
CCNL1-217ENST00000476367 TIMM8BQ9Y5J9 83 aaPredicted RBP10.24□□□□□ -0.77
CCNL1-217ENST00000476367 DYNC2H1Q8NCM8 4307 aaKnown RBP10.24□□□□□ -0.77
CCNL1-217ENST00000476367 IGHV3-16A0A0C4DH30 117 aa10.23□□□□□ -0.77
CCNL1-217ENST00000476367 LYRM9A8MSI8 78 aa10.23□□□□□ -0.77
CCNL1-217ENST00000476367 ZNF727A8MUV8 499 aa10.23□□□□□ -0.77
CCNL1-217ENST00000476367 DEFB130BP0DP73 79 aa10.23□□□□□ -0.77
CCNL1-217ENST00000476367 DEFB130AP0DP74 79 aa10.23□□□□□ -0.77
CCNL1-217ENST00000476367 LINC01559Q495D7 138 aa10.23□□□□□ -0.77
CCNL1-217ENST00000476367 PRR27Q6MZM9 219 aa10.23□□□□□ -0.77
CCNL1-217ENST00000476367 CEMP1Q6PRD7 247 aaPredicted RBP10.23□□□□□ -0.77
CCNL1-217ENST00000476367 FAM159AQ6UWV7 190 aa10.23□□□□□ -0.77
CCNL1-217ENST00000476367 COMMD7Q86VX2 200 aa10.23□□□□□ -0.77
CCNL1-217ENST00000476367 GSN-AS1Q9NRJ2 163 aa10.23□□□□□ -0.77
CCNL1-217ENST00000476367 M0R036 132 aa10.22□□□□□ -0.77
CCNL1-217ENST00000476367 SFTA3P0C7M3 94 aa10.22□□□□□ -0.77
CCNL1-217ENST00000476367 MGST1P10620 155 aaKnown RBP10.22□□□□□ -0.77
CCNL1-217ENST00000476367 RNASE3P12724 160 aaKnown RBP10.22□□□□□ -0.77
CCNL1-217ENST00000476367 HTN3P15516 51 aa10.22□□□□□ -0.77
CCNL1-217ENST00000476367 LY96Q9Y6Y9 160 aa10.22□□□□□ -0.77
CCNL1-217ENST00000476367 TRAV10A0A0B4J240 114 aa10.22□□□□□ -0.77
CCNL1-217ENST00000476367 IBA57Q5T440 356 aaKnown RBP10.22□□□□□ -0.77
CCNL1-217ENST00000476367 RNASE7Q9H1E1 156 aaKnown RBP10.22□□□□□ -0.77
CCNL1-217ENST00000476367 DEFB131BA0A096LNP1 70 aa10.21□□□□□ -0.78
CCNL1-217ENST00000476367 TCL1AP56279 114 aa10.21□□□□□ -0.78
CCNL1-217ENST00000476367 RPL23P62829 140 aaKnown RBP10.21□□□□□ -0.78
CCNL1-217ENST00000476367 ZNF415Q09FC8 603 aa10.21□□□□□ -0.78
CCNL1-217ENST00000476367 SOHLH1Q5JUK2 328 aa10.21□□□□□ -0.78
CCNL1-217ENST00000476367 UQCC3Q6UW78 93 aa10.21□□□□□ -0.78
CCNL1-217ENST00000476367 LINC00612Q8N6U2 182 aa10.21□□□□□ -0.78
CCNL1-217ENST00000476367 NUDT10Q8NFP7 164 aa10.21□□□□□ -0.78
CCNL1-217ENST00000476367 NUDT11Q96G61 164 aa10.21□□□□□ -0.78
CCNL1-217ENST00000476367 KLK5Q9Y337 293 aaPredicted RBP10.21□□□□□ -0.78
CCNL1-217ENST00000476367 B4DEV8 164 aa10.2□□□□□ -0.78
CCNL1-217ENST00000476367 ORM1P02763 201 aa10.2□□□□□ -0.78
CCNL1-217ENST00000476367 DAZ2Q13117 558 aaKnown RBP10.2□□□□□ -0.78
CCNL1-217ENST00000476367 FAM74A3Q4VXF1 159 aa10.2□□□□□ -0.78
CCNL1-217ENST00000476367 DNLZQ5SXM8 178 aa10.2□□□□□ -0.78
CCNL1-217ENST00000476367 C9orf85Q96MD7 179 aa10.2□□□□□ -0.78
CCNL1-217ENST00000476367 SDF2L1Q9HCN8 221 aa10.2□□□□□ -0.78
CCNL1-217ENST00000476367 TRGV11A0A075B6L2 103 aa10.19□□□□□ -0.78
CCNL1-217ENST00000476367 GAGE12BA1L429 117 aa10.19□□□□□ -0.78
CCNL1-217ENST00000476367 TMEM218A2RU14 115 aa10.19□□□□□ -0.78
CCNL1-217ENST00000476367 GAGE7O76087 117 aa10.19□□□□□ -0.78
CCNL1-217ENST00000476367 GAGE12FP0CL80 117 aa10.19□□□□□ -0.78
CCNL1-217ENST00000476367 GAGE12GP0CL81 117 aa10.19□□□□□ -0.78
CCNL1-217ENST00000476367 GAGE12IP0CL82 117 aa10.19□□□□□ -0.78
CCNL1-217ENST00000476367 TMEM241Q24JQ0 296 aa10.19□□□□□ -0.78
CCNL1-217ENST00000476367 Q6ZTI0 123 aa10.19□□□□□ -0.78
CCNL1-217ENST00000476367 KCNS1Q96KK3 526 aa10.19□□□□□ -0.78
CCNL1-217ENST00000476367 LYSTQ99698 3801 aa10.19□□□□□ -0.78
CCNL1-217ENST00000476367 TMSB15BA0A087X1C1 80 aa10.18□□□□□ -0.78
CCNL1-217ENST00000476367 TRGV1A0A0A0MS02 117 aa10.18□□□□□ -0.78
CCNL1-217ENST00000476367 GRIFINA4D1Z8 144 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms