RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 FAM25GB3EWG6 89 aa2.27□□□□□ -2.05
VPS13D-207ENST00000476169 M0R233 179 aa2.27□□□□□ -2.05
VPS13D-207ENST00000476169 TCRAP04437 139 aa2.27□□□□□ -2.05
VPS13D-207ENST00000476169 LSM3P62310 102 aaKnown RBP2.27□□□□□ -2.05
VPS13D-207ENST00000476169 MRPS36P82909 103 aaKnown RBP2.27□□□□□ -2.05
VPS13D-207ENST00000476169 TAF9Q16594 264 aa2.27□□□□□ -2.05
VPS13D-207ENST00000476169 GLYATL3Q5SZD4 288 aa2.27□□□□□ -2.05
VPS13D-207ENST00000476169 TMEM14EPQ6UXP3 125 aa2.27□□□□□ -2.05
VPS13D-207ENST00000476169 CTAGE3PQ8IX95 158 aa2.27□□□□□ -2.05
VPS13D-207ENST00000476169 Q8IYB0 196 aa2.27□□□□□ -2.05
VPS13D-207ENST00000476169 CGREF1Q99674 301 aa2.27□□□□□ -2.05
VPS13D-207ENST00000476169 CST9LQ9H4G1 147 aa2.27□□□□□ -2.05
VPS13D-207ENST00000476169 TAF9BQ9HBM6 251 aa2.27□□□□□ -2.05
VPS13D-207ENST00000476169 C14orf132Q9NPU4 83 aa2.27□□□□□ -2.05
VPS13D-207ENST00000476169 COL4A4P53420 1690 aaPredicted RBP2.27□□□□□ -2.05
VPS13D-207ENST00000476169 CEP290O15078 2479 aa2.27□□□□□ -2.05
VPS13D-207ENST00000476169 GPR179Q6PRD1 2367 aa2.27□□□□□ -2.05
VPS13D-207ENST00000476169 MYH4Q9Y623 1939 aa2.27□□□□□ -2.05
VPS13D-207ENST00000476169 TANC1Q9C0D5 1861 aa2.26□□□□□ -2.05
VPS13D-207ENST00000476169 PRRC2BQ5JSZ5 2229 aaKnown RBP2.26□□□□□ -2.05
VPS13D-207ENST00000476169 SPTBN5Q9NRC6 3674 aaKnown RBP2.26□□□□□ -2.05
VPS13D-207ENST00000476169 IBA57-AS1B1ANH7 110 aa2.26□□□□□ -2.05
VPS13D-207ENST00000476169 C10orf142B7Z368 130 aa2.26□□□□□ -2.05
VPS13D-207ENST00000476169 C17orf112F2Z3M2 114 aa2.26□□□□□ -2.05
VPS13D-207ENST00000476169 UBL3O95164 117 aa2.26□□□□□ -2.05
VPS13D-207ENST00000476169 BAALC-AS2P0C853 105 aa2.26□□□□□ -2.05
VPS13D-207ENST00000476169 IGLC6P0CF74 106 aa2.26□□□□□ -2.05
VPS13D-207ENST00000476169 KDELR1P24390 212 aa2.26□□□□□ -2.05
VPS13D-207ENST00000476169 MAXP61244 160 aa2.26□□□□□ -2.05
VPS13D-207ENST00000476169 COPZ1P61923 177 aa2.26□□□□□ -2.05
VPS13D-207ENST00000476169 RRAS2P62070 204 aaPredicted RBP2.26□□□□□ -2.05
VPS13D-207ENST00000476169 RPS25P62851 125 aaKnown RBP2.26□□□□□ -2.05
VPS13D-207ENST00000476169 ZNF826PQ6ZT77 177 aa2.26□□□□□ -2.05
VPS13D-207ENST00000476169 MORN4Q8NDC4 146 aa2.26□□□□□ -2.05
VPS13D-207ENST00000476169 C1orf54Q8WWF1 131 aa2.26□□□□□ -2.05
VPS13D-207ENST00000476169 POP5Q969H6 163 aaKnown RBP2.26□□□□□ -2.05
VPS13D-207ENST00000476169 ERG28Q9UKR5 140 aa2.26□□□□□ -2.05
VPS13D-207ENST00000476169 TPRKBQ9Y3C4 175 aa2.26□□□□□ -2.05
VPS13D-207ENST00000476169 SCN8AQ9UQD0 1980 aa2.26□□□□□ -2.05
VPS13D-207ENST00000476169 UQCRQO14949 82 aa2.25□□□□□ -2.05
VPS13D-207ENST00000476169 GNG7O60262 68 aa2.25□□□□□ -2.05
VPS13D-207ENST00000476169 OR1I1O60431 355 aa2.25□□□□□ -2.05
VPS13D-207ENST00000476169 HBDP02042 147 aa2.25□□□□□ -2.05
VPS13D-207ENST00000476169 APOC1P02654 83 aa2.25□□□□□ -2.05
VPS13D-207ENST00000476169 APODP05090 189 aa2.25□□□□□ -2.05
VPS13D-207ENST00000476169 SLC25A5P05141 298 aaKnown RBP2.25□□□□□ -2.05
VPS13D-207ENST00000476169 LINC00694P0DN24 101 aa2.25□□□□□ -2.05
VPS13D-207ENST00000476169 RNASE2P10153 161 aaKnown RBP2.25□□□□□ -2.05
VPS13D-207ENST00000476169 FABP4P15090 132 aa2.25□□□□□ -2.05
VPS13D-207ENST00000476169 S100A1P23297 94 aa2.25□□□□□ -2.05
VPS13D-207ENST00000476169 SELENOWP63302 87 aa2.25□□□□□ -2.05
VPS13D-207ENST00000476169 LINC00304Q8N9R0 145 aa2.25□□□□□ -2.05
VPS13D-207ENST00000476169 NAT14Q8WUY8 206 aa2.25□□□□□ -2.05
VPS13D-207ENST00000476169 DIRC1Q969H9 104 aa2.25□□□□□ -2.05
VPS13D-207ENST00000476169 ARL11Q969Q4 196 aa2.25□□□□□ -2.05
VPS13D-207ENST00000476169 TIMM21Q9BVV7 248 aa2.25□□□□□ -2.05
VPS13D-207ENST00000476169 PRO2289Q9P1D8 64 aa2.25□□□□□ -2.05
VPS13D-207ENST00000476169 SIP14410 1827 aa2.25□□□□□ -2.05
VPS13D-207ENST00000476169 CHD9Q3L8U1 2897 aa2.25□□□□□ -2.05
VPS13D-207ENST00000476169 MCM3APO60318 1980 aa2.25□□□□□ -2.05
VPS13D-207ENST00000476169 EML6Q6ZMW3 1958 aa2.25□□□□□ -2.05
VPS13D-207ENST00000476169 A0A0G2JQZ4 141 aa2.24□□□□□ -2.05
VPS13D-207ENST00000476169 LINC00587B1AMM8 73 aa2.24□□□□□ -2.05
VPS13D-207ENST00000476169 LY6LH3BQJ8 138 aa2.24□□□□□ -2.05
VPS13D-207ENST00000476169 DLEU1O43261 78 aa2.24□□□□□ -2.05
VPS13D-207ENST00000476169 IGKV1-17P01599 117 aa2.24□□□□□ -2.05
VPS13D-207ENST00000476169 CRPP02741 224 aa2.24□□□□□ -2.05
VPS13D-207ENST00000476169 GPX1P07203 203 aa2.24□□□□□ -2.05
VPS13D-207ENST00000476169 ASAH2BP0C7U1 165 aa2.24□□□□□ -2.05
VPS13D-207ENST00000476169 SSR2P43308 183 aa2.24□□□□□ -2.05
VPS13D-207ENST00000476169 CDK6Q00534 326 aa2.24□□□□□ -2.05
VPS13D-207ENST00000476169 IGFL3Q6UXB1 125 aa2.24□□□□□ -2.05
VPS13D-207ENST00000476169 OR5D14Q8NGL3 314 aa2.24□□□□□ -2.05
VPS13D-207ENST00000476169 OR4C12Q96R67 309 aa2.24□□□□□ -2.05
VPS13D-207ENST00000476169 SNRNP25Q9BV90 132 aaKnown RBP2.24□□□□□ -2.05
VPS13D-207ENST00000476169 FKBP11Q9NYL4 201 aa2.24□□□□□ -2.05
VPS13D-207ENST00000476169 MALRD1Q5VYJ5 2156 aa2.23□□□□□ -2.05
VPS13D-207ENST00000476169 CHD7Q9P2D1 2997 aa2.23□□□□□ -2.05
VPS13D-207ENST00000476169 CPAMD8Q8IZJ3 1885 aa2.23□□□□□ -2.05
VPS13D-207ENST00000476169 MYO16Q9Y6X6 1858 aa2.23□□□□□ -2.05
VPS13D-207ENST00000476169 IGKV1D-17A0A075B6S4 117 aa2.23□□□□□ -2.05
VPS13D-207ENST00000476169 SPAARA0A1B0GVQ0 90 aa2.23□□□□□ -2.05
VPS13D-207ENST00000476169 hDV103S1A0JD37 113 aa2.23□□□□□ -2.05
VPS13D-207ENST00000476169 ZNF705FA8MVS1 300 aaPredicted RBP2.23□□□□□ -2.05
VPS13D-207ENST00000476169 HIST1H1BP16401 226 aaKnown RBP2.23□□□□□ -2.05
VPS13D-207ENST00000476169 CIRBPQ14011 172 aaKnown RBP2.23□□□□□ -2.05
VPS13D-207ENST00000476169 ZNF846Q147U1 533 aa2.23□□□□□ -2.05
VPS13D-207ENST00000476169 SS18Q15532 418 aa2.23□□□□□ -2.05
VPS13D-207ENST00000476169 WHAMMP3Q1A5X7 153 aa2.23□□□□□ -2.05
VPS13D-207ENST00000476169 DEFB124Q8NES8 71 aa2.23□□□□□ -2.05
VPS13D-207ENST00000476169 TMEM254Q8TBM7 123 aa2.23□□□□□ -2.05
VPS13D-207ENST00000476169 RAB37Q96AX2 223 aa2.23□□□□□ -2.05
VPS13D-207ENST00000476169 HYLS1Q96M11 299 aa2.23□□□□□ -2.05
VPS13D-207ENST00000476169 LHFPL6Q9Y693 200 aa2.23□□□□□ -2.05
VPS13D-207ENST00000476169 TECTAO75443 2155 aa2.23□□□□□ -2.05
VPS13D-207ENST00000476169 MYH8P13535 1937 aa2.23□□□□□ -2.05
VPS13D-207ENST00000476169 VCANP13611 3396 aa2.23□□□□□ -2.05
VPS13D-207ENST00000476169 NCOR1O75376 2440 aa2.22□□□□□ -2.05
VPS13D-207ENST00000476169 IGKV2D-26A0A0A0MRZ7 120 aa2.22□□□□□ -2.05
VPS13D-207ENST00000476169 LOC107986453A0A1B0GWG9 222 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms