RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 IGLV3-32A0A0A0MS00 114 aa9.23□□□□□ -0.93
U2AF1-209ENST00000475639 TINCRA0A1B0GVN0 87 aa9.23□□□□□ -0.93
U2AF1-209ENST00000475639 EFNA4P52798 201 aa9.23□□□□□ -0.93
U2AF1-209ENST00000475639 ANXA2RQ3ZCQ2 193 aa9.23□□□□□ -0.93
U2AF1-209ENST00000475639 THAP8Q8NA92 274 aa9.23□□□□□ -0.93
U2AF1-209ENST00000475639 OR11H6Q8NGC7 330 aa9.23□□□□□ -0.93
U2AF1-209ENST00000475639 DAZ1Q9NQZ3 744 aaKnown RBP9.23□□□□□ -0.93
U2AF1-209ENST00000475639 WISP2O76076 250 aa9.23□□□□□ -0.93
U2AF1-209ENST00000475639 PRB4P10163 310 aaPredicted RBP9.23□□□□□ -0.93
U2AF1-209ENST00000475639 COX8AP10176 69 aa9.23□□□□□ -0.93
U2AF1-209ENST00000475639 CARD19Q96LW7 228 aa9.23□□□□□ -0.93
U2AF1-209ENST00000475639 IGHV1-3A0A0C4DH29 117 aa9.23□□□□□ -0.93
U2AF1-209ENST00000475639 GAGE12HA6NDE8 117 aa9.23□□□□□ -0.93
U2AF1-209ENST00000475639 KNCNA6PVL3 124 aa9.23□□□□□ -0.93
U2AF1-209ENST00000475639 MP68P56378 58 aa9.23□□□□□ -0.93
U2AF1-209ENST00000475639 C3orf56Q8N813 242 aa9.23□□□□□ -0.93
U2AF1-209ENST00000475639 TMEM243Q9BU79 118 aa9.23□□□□□ -0.93
U2AF1-209ENST00000475639 IGHV1-46P01743 117 aa9.23□□□□□ -0.93
U2AF1-209ENST00000475639 IGHV1-8P0DP01 117 aa9.23□□□□□ -0.93
U2AF1-209ENST00000475639 FUSP35637 526 aaKnown RBP eCLIP9.22□□□□□ -0.93
U2AF1-209ENST00000475639 IGF2BP2-AS1Q96M15 143 aa9.22□□□□□ -0.93
U2AF1-209ENST00000475639 MSRB2Q9Y3D2 182 aa9.22□□□□□ -0.93
U2AF1-209ENST00000475639 PTPN13Q12923 2485 aa9.22□□□□□ -0.93
U2AF1-209ENST00000475639 GFRA4Q9GZZ7 299 aa9.22□□□□□ -0.93
U2AF1-209ENST00000475639 NDUFB1O75438 58 aa9.22□□□□□ -0.93
U2AF1-209ENST00000475639 UBE2BP63146 152 aa9.22□□□□□ -0.93
U2AF1-209ENST00000475639 C15orf53Q8NAA6 179 aa9.22□□□□□ -0.93
U2AF1-209ENST00000475639 SDHAF1A6NFY7 115 aa9.21□□□□□ -0.93
U2AF1-209ENST00000475639 PRSS46E5RG02 174 aa9.21□□□□□ -0.93
U2AF1-209ENST00000475639 OVOL3O00110 214 aa9.21□□□□□ -0.93
U2AF1-209ENST00000475639 LINC00205P59089 165 aa9.21□□□□□ -0.93
U2AF1-209ENST00000475639 MRPL14Q6P1L8 145 aaKnown RBP9.21□□□□□ -0.93
U2AF1-209ENST00000475639 NCKAP5O14513 1909 aa9.21□□□□□ -0.93
U2AF1-209ENST00000475639 PRSS29PA6NIE9 313 aa9.21□□□□□ -0.94
U2AF1-209ENST00000475639 CRYGCP07315 174 aa9.21□□□□□ -0.94
U2AF1-209ENST00000475639 ZNF329Q86UD4 541 aa9.21□□□□□ -0.94
U2AF1-209ENST00000475639 BAALCQ8WXS3 180 aa9.21□□□□□ -0.94
U2AF1-209ENST00000475639 MBD6Q96DN6 1003 aa9.21□□□□□ -0.94
U2AF1-209ENST00000475639 A0A1W2PPM0 123 aa9.21□□□□□ -0.94
U2AF1-209ENST00000475639 I3L3M4 83 aa9.21□□□□□ -0.94
U2AF1-209ENST00000475639 EIF4EBP1Q13541 118 aaPredicted RBP9.21□□□□□ -0.94
U2AF1-209ENST00000475639 C8orf31Q8N9H6 132 aa9.21□□□□□ -0.94
U2AF1-209ENST00000475639 B5MCH6 92 aa9.2□□□□□ -0.94
U2AF1-209ENST00000475639 MDS2Q8NDY4 140 aa9.2□□□□□ -0.94
U2AF1-209ENST00000475639 XCL2Q9UBD3 114 aa9.2□□□□□ -0.94
U2AF1-209ENST00000475639 WDR87Q6ZQQ6 2873 aa9.2□□□□□ -0.94
U2AF1-209ENST00000475639 HLA-DMBP28068 263 aa9.2□□□□□ -0.94
U2AF1-209ENST00000475639 Q6ZR03 302 aa9.2□□□□□ -0.94
U2AF1-209ENST00000475639 NTN5Q8WTR8 489 aaPredicted RBP9.2□□□□□ -0.94
U2AF1-209ENST00000475639 SIGLEC9Q9Y336 463 aa9.2□□□□□ -0.94
U2AF1-209ENST00000475639 TRANK1O15050 2925 aa9.2□□□□□ -0.94
U2AF1-209ENST00000475639 F6UB75 175 aa9.2□□□□□ -0.94
U2AF1-209ENST00000475639 Q86TA4 180 aa9.2□□□□□ -0.94
U2AF1-209ENST00000475639 WFDC9Q8NEX5 89 aa9.2□□□□□ -0.94
U2AF1-209ENST00000475639 A0A1B0GX51 115 aa9.19□□□□□ -0.94
U2AF1-209ENST00000475639 FAM223BA6NKX1 122 aa9.19□□□□□ -0.94
U2AF1-209ENST00000475639 CFHR2P36980 270 aa9.19□□□□□ -0.94
U2AF1-209ENST00000475639 FAM223AQ8IWN6 122 aa9.19□□□□□ -0.94
U2AF1-209ENST00000475639 Q8N8P6 123 aa9.19□□□□□ -0.94
U2AF1-209ENST00000475639 MALRD1Q5VYJ5 2156 aa9.19□□□□□ -0.94
U2AF1-209ENST00000475639 F8VRH5 84 aa9.19□□□□□ -0.94
U2AF1-209ENST00000475639 ZFP2Q6ZN57 461 aa9.19□□□□□ -0.94
U2AF1-209ENST00000475639 ZNF503Q96F45 646 aa9.19□□□□□ -0.94
U2AF1-209ENST00000475639 LINC00479Q96M42 142 aa9.19□□□□□ -0.94
U2AF1-209ENST00000475639 VPS13AQ96RL7 3174 aa9.19□□□□□ -0.94
U2AF1-209ENST00000475639 FNDC10F2Z333 226 aa9.19□□□□□ -0.94
U2AF1-209ENST00000475639 NTN3O00634 580 aaPredicted RBP9.19□□□□□ -0.94
U2AF1-209ENST00000475639 DKK1O94907 266 aa9.19□□□□□ -0.94
U2AF1-209ENST00000475639 HLA-DRB4P13762 266 aa9.19□□□□□ -0.94
U2AF1-209ENST00000475639 IGFL4Q6B9Z1 124 aa9.19□□□□□ -0.94
U2AF1-209ENST00000475639 ZNRF2Q8NHG8 242 aa9.19□□□□□ -0.94
U2AF1-209ENST00000475639 COLQQ9Y215 455 aaPredicted RBP9.19□□□□□ -0.94
U2AF1-209ENST00000475639 HLA-DRB4X5D2U9 266 aa9.19□□□□□ -0.94
U2AF1-209ENST00000475639 IGHV1-18A0A0C4DH31 117 aa9.18□□□□□ -0.94
U2AF1-209ENST00000475639 RS1O15537 224 aa9.18□□□□□ -0.94
U2AF1-209ENST00000475639 SRSF8Q9BRL6 282 aaKnown RBP9.18□□□□□ -0.94
U2AF1-209ENST00000475639 TFF1P04155 84 aa9.18□□□□□ -0.94
U2AF1-209ENST00000475639 LINC01545Q5VT33 79 aa9.18□□□□□ -0.94
U2AF1-209ENST00000475639 TET2Q6N021 2002 aaPredicted RBP9.18□□□□□ -0.94
U2AF1-209ENST00000475639 TNRC6AQ8NDV7 1962 aaKnown RBP9.18□□□□□ -0.94
U2AF1-209ENST00000475639 NBEAQ8NFP9 2946 aa9.18□□□□□ -0.94
U2AF1-209ENST00000475639 A0A1B0GXF2 115 aa9.18□□□□□ -0.94
U2AF1-209ENST00000475639 M0R1W7 72 aa9.18□□□□□ -0.94
U2AF1-209ENST00000475639 TMEM200BQ69YZ2 307 aa9.18□□□□□ -0.94
U2AF1-209ENST00000475639 Q6P435 159 aa9.18□□□□□ -0.94
U2AF1-209ENST00000475639 SHANK2-AS3Q9BTD1 123 aa9.18□□□□□ -0.94
U2AF1-209ENST00000475639 BRD3OSQ6XYD6 125 aa9.17□□□□□ -0.94
U2AF1-209ENST00000475639 ZNF492Q9P255 531 aa9.17□□□□□ -0.94
U2AF1-209ENST00000475639 MED13Q9UHV7 2174 aa9.17□□□□□ -0.94
U2AF1-209ENST00000475639 LINC00473A8K010 186 aa9.17□□□□□ -0.94
U2AF1-209ENST00000475639 ACYP1P07311 99 aa9.17□□□□□ -0.94
U2AF1-209ENST00000475639 HCFC1P51610 2035 aa9.17□□□□□ -0.94
U2AF1-209ENST00000475639 H3BMG7 143 aa9.17□□□□□ -0.94
U2AF1-209ENST00000475639 J3QQQ9 107 aa9.17□□□□□ -0.94
U2AF1-209ENST00000475639 LGALS9BQ3B8N2 356 aa9.17□□□□□ -0.94
U2AF1-209ENST00000475639 LGALS9CQ6DKI2 356 aa9.17□□□□□ -0.94
U2AF1-209ENST00000475639 ZNF462Q96JM2 2506 aa9.17□□□□□ -0.94
U2AF1-209ENST00000475639 TRIOO75962 3097 aa9.17□□□□□ -0.94
U2AF1-209ENST00000475639 HERVK_113P63121 156 aa9.17□□□□□ -0.94
U2AF1-209ENST00000475639 SPATA25Q9BR10 227 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms