RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 UFC1Q9Y3C8 167 aa10.67□□□□□ -0.7
UBXN11-214ENST00000475591 HSBP1L1C9JCN9 74 aa10.66□□□□□ -0.7
UBXN11-214ENST00000475591 BRI3O95415 125 aa10.66□□□□□ -0.7
UBXN11-214ENST00000475591 HBDP02042 147 aa10.66□□□□□ -0.7
UBXN11-214ENST00000475591 LINC01356Q8N9X3 169 aa10.66□□□□□ -0.7
UBXN11-214ENST00000475591 KRTAP10-9P60411 292 aa10.66□□□□□ -0.7
UBXN11-214ENST00000475591 CACNG7P62955 275 aa10.66□□□□□ -0.7
UBXN11-214ENST00000475591 C18orf15Q96N68 181 aa10.66□□□□□ -0.7
UBXN11-214ENST00000475591 MAP1LC3AQ9H492 121 aa10.66□□□□□ -0.7
UBXN11-214ENST00000475591 LRRK2Q5S007 2527 aa10.66□□□□□ -0.7
UBXN11-214ENST00000475591 A0A0G2JLM5 398 aa10.65□□□□□ -0.7
UBXN11-214ENST00000475591 SLC25A16P16260 332 aa10.65□□□□□ -0.7
UBXN11-214ENST00000475591 OR10J6PQ8NGY7 276 aa10.65□□□□□ -0.7
UBXN11-214ENST00000475591 MXRA5Q9NR99 2828 aa10.65□□□□□ -0.7
UBXN11-214ENST00000475591 UBR5O95071 2799 aaPredicted RBP10.65□□□□□ -0.7
UBXN11-214ENST00000475591 RNF223E7ERA6 249 aa10.65□□□□□ -0.7
UBXN11-214ENST00000475591 SNAI2O43623 268 aa10.65□□□□□ -0.7
UBXN11-214ENST00000475591 DSCR9P59020 149 aa10.65□□□□□ -0.7
UBXN11-214ENST00000475591 SPANXN1Q5VSR9 72 aa10.65□□□□□ -0.7
UBXN11-214ENST00000475591 DAZ1Q9NQZ3 744 aaKnown RBP10.65□□□□□ -0.7
UBXN11-214ENST00000475591 ZNF469Q96JG9 3925 aaPredicted RBP10.65□□□□□ -0.71
UBXN11-214ENST00000475591 DLEU1O43261 78 aa10.64□□□□□ -0.71
UBXN11-214ENST00000475591 SLC25A34Q6PIV7 304 aa10.64□□□□□ -0.71
UBXN11-214ENST00000475591 WFDC12Q8WWY7 111 aa10.64□□□□□ -0.71
UBXN11-214ENST00000475591 PEF1Q9UBV8 284 aaKnown RBP10.64□□□□□ -0.71
UBXN11-214ENST00000475591 PPBPP02775 128 aa10.64□□□□□ -0.71
UBXN11-214ENST00000475591 COX6B1P14854 86 aa10.64□□□□□ -0.71
UBXN11-214ENST00000475591 GATA3P23771 443 aa10.64□□□□□ -0.71
UBXN11-214ENST00000475591 PSMB8P28062 276 aa10.64□□□□□ -0.71
UBXN11-214ENST00000475591 RBX1P62877 108 aa10.64□□□□□ -0.71
UBXN11-214ENST00000475591 LINC00477Q96M19 166 aa10.64□□□□□ -0.71
UBXN11-214ENST00000475591 RNASE4P34096 147 aaKnown RBP10.63□□□□□ -0.71
UBXN11-214ENST00000475591 LEPP41159 167 aa10.63□□□□□ -0.71
UBXN11-214ENST00000475591 MPV17L2Q567V2 206 aa10.63□□□□□ -0.71
UBXN11-214ENST00000475591 IFI27L1Q96BM0 104 aa10.63□□□□□ -0.71
UBXN11-214ENST00000475591 SMPXQ9UHP9 88 aa10.63□□□□□ -0.71
UBXN11-214ENST00000475591 OVOL1O14753 267 aa10.63□□□□□ -0.71
UBXN11-214ENST00000475591 CLUHP3Q96NS8 147 aa10.63□□□□□ -0.71
UBXN11-214ENST00000475591 NBPF19A0A087WUL8 3843 aa10.63□□□□□ -0.71
UBXN11-214ENST00000475591 M0R381 172 aa10.62□□□□□ -0.71
UBXN11-214ENST00000475591 ANXA2RQ3ZCQ2 193 aa10.62□□□□□ -0.71
UBXN11-214ENST00000475591 OR2K2Q8NGT1 345 aa10.62□□□□□ -0.71
UBXN11-214ENST00000475591 LENEPQ9Y5L5 61 aa10.62□□□□□ -0.71
UBXN11-214ENST00000475591 ZNF843Q8N446 348 aa10.62□□□□□ -0.71
UBXN11-214ENST00000475591 NRACQ8N912 160 aa10.62□□□□□ -0.71
UBXN11-214ENST00000475591 DKK2Q9UBU2 259 aa10.62□□□□□ -0.71
UBXN11-214ENST00000475591 GNRH2O43555 120 aa10.61□□□□□ -0.71
UBXN11-214ENST00000475591 MS4A6AQ9H2W1 248 aa10.61□□□□□ -0.71
UBXN11-214ENST00000475591 IGLV2-18A0A075B6J9 118 aa10.61□□□□□ -0.71
UBXN11-214ENST00000475591 TRAV21A0A0B4J279 112 aa10.61□□□□□ -0.71
UBXN11-214ENST00000475591 LGALS9BQ3B8N2 356 aa10.61□□□□□ -0.71
UBXN11-214ENST00000475591 LGALS9CQ6DKI2 356 aa10.61□□□□□ -0.71
UBXN11-214ENST00000475591 FAM19A4Q96LR4 140 aa10.61□□□□□ -0.71
UBXN11-214ENST00000475591 NUDT3O95989 172 aa10.6□□□□□ -0.71
UBXN11-214ENST00000475591 SMIM15Q7Z3B0 74 aa10.6□□□□□ -0.71
UBXN11-214ENST00000475591 RNASE8Q8TDE3 154 aaKnown RBP10.6□□□□□ -0.71
UBXN11-214ENST00000475591 TMEM158Q8WZ71 300 aa10.6□□□□□ -0.71
UBXN11-214ENST00000475591 IGHV4-4A0A075B6R2 117 aa10.6□□□□□ -0.71
UBXN11-214ENST00000475591 LINC01546A6NGU7 62 aa10.6□□□□□ -0.71
UBXN11-214ENST00000475591 NXT2Q9NPJ8 142 aaKnown RBP10.6□□□□□ -0.71
UBXN11-214ENST00000475591 ABCA12Q86UK0 2595 aa10.6□□□□□ -0.71
UBXN11-214ENST00000475591 DOPEY2Q9Y3R5 2298 aa10.6□□□□□ -0.71
UBXN11-214ENST00000475591 PTPN13Q12923 2485 aa10.6□□□□□ -0.71
UBXN11-214ENST00000475591 S100A4P26447 101 aaKnown RBP10.59□□□□□ -0.71
UBXN11-214ENST00000475591 FCER1GP30273 86 aa10.59□□□□□ -0.71
UBXN11-214ENST00000475591 DCANP1Q8TF63 244 aa10.59□□□□□ -0.71
UBXN11-214ENST00000475591 IGHV4-31P0DP07 118 aa10.59□□□□□ -0.71
UBXN11-214ENST00000475591 COX8AP10176 69 aa10.59□□□□□ -0.71
UBXN11-214ENST00000475591 C2orf91Q6ZV80 131 aa10.59□□□□□ -0.71
UBXN11-214ENST00000475591 Q8N8P6 123 aa10.59□□□□□ -0.71
UBXN11-214ENST00000475591 DUX5Q96PT3 197 aa10.59□□□□□ -0.71
UBXN11-214ENST00000475591 BEX4Q9NWD9 120 aaPredicted RBP10.59□□□□□ -0.71
UBXN11-214ENST00000475591 Q5PR19 223 aa10.58□□□□□ -0.72
UBXN11-214ENST00000475591 ERASQ7Z444 233 aa10.58□□□□□ -0.72
UBXN11-214ENST00000475591 C14orf178Q8N769 122 aaPredicted RBP10.58□□□□□ -0.72
UBXN11-214ENST00000475591 TEX15Q9BXT5 2789 aa10.58□□□□□ -0.72
UBXN11-214ENST00000475591 ASIPP42127 132 aa10.58□□□□□ -0.72
UBXN11-214ENST00000475591 K7EMT4 169 aa10.57□□□□□ -0.72
UBXN11-214ENST00000475591 CD5LO43866 347 aa10.57□□□□□ -0.72
UBXN11-214ENST00000475591 ZNF688P0C7X2 276 aa10.57□□□□□ -0.72
UBXN11-214ENST00000475591 FGF6P10767 208 aa10.57□□□□□ -0.72
UBXN11-214ENST00000475591 BVES-AS1Q5T3Y7 98 aa10.57□□□□□ -0.72
UBXN11-214ENST00000475591 PHLDA3Q9Y5J5 127 aa10.57□□□□□ -0.72
UBXN11-214ENST00000475591 J3QLI3 93 aa10.57□□□□□ -0.72
UBXN11-214ENST00000475591 RNASE3P12724 160 aaKnown RBP10.57□□□□□ -0.72
UBXN11-214ENST00000475591 SYNJ2BPP57105 145 aa10.57□□□□□ -0.72
UBXN11-214ENST00000475591 VPREB3Q9UKI3 123 aa10.57□□□□□ -0.72
UBXN11-214ENST00000475591 CR1P17927 2039 aa10.57□□□□□ -0.72
UBXN11-214ENST00000475591 HOXA3O43365 443 aaPredicted RBP10.56□□□□□ -0.72
UBXN11-214ENST00000475591 IGKV3-20P01619 116 aa10.56□□□□□ -0.72
UBXN11-214ENST00000475591 GAGE1Q13065 139 aa10.56□□□□□ -0.72
UBXN11-214ENST00000475591 APRG1Q8IVJ8 170 aa10.56□□□□□ -0.72
UBXN11-214ENST00000475591 RPL39LQ96EH5 51 aaKnown RBP10.56□□□□□ -0.72
UBXN11-214ENST00000475591 ZNF580Q9UK33 172 aa10.56□□□□□ -0.72
UBXN11-214ENST00000475591 ZNF702PQ9H963 129 aa10.56□□□□□ -0.72
UBXN11-214ENST00000475591 IGHV4OR15-8A0A075B7B6 117 aa10.55□□□□□ -0.72
UBXN11-214ENST00000475591 A0A087WW49 117 aa10.55□□□□□ -0.72
UBXN11-214ENST00000475591 FSHBP01225 129 aa10.55□□□□□ -0.72
UBXN11-214ENST00000475591 PRSS1P07477 247 aa10.55□□□□□ -0.72
UBXN11-214ENST00000475591 SMIM17P0DL12 118 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms