RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 DOCK9Q9BZ29 2069 aa4.55□□□□□ -1.68
SMARCE1-208ENST00000474246 ARID1BQ8NFD5 2236 aaPredicted RBP4.55□□□□□ -1.68
SMARCE1-208ENST00000474246 TRBV5-3A0A0A0MS03 114 aa4.55□□□□□ -1.68
SMARCE1-208ENST00000474246 HOXB6P17509 224 aaKnown RBP4.55□□□□□ -1.68
SMARCE1-208ENST00000474246 MPV17P39210 176 aa4.55□□□□□ -1.68
SMARCE1-208ENST00000474246 SSR2P43308 183 aa4.55□□□□□ -1.68
SMARCE1-208ENST00000474246 LINC00310P59036 64 aa4.55□□□□□ -1.68
SMARCE1-208ENST00000474246 KRTDAPP60985 99 aa4.55□□□□□ -1.68
SMARCE1-208ENST00000474246 RBMY1FQ15415 496 aaKnown RBP4.55□□□□□ -1.68
SMARCE1-208ENST00000474246 DEFB113Q30KQ7 82 aa4.55□□□□□ -1.68
SMARCE1-208ENST00000474246 RUSC1-AS1Q66K80 236 aa4.55□□□□□ -1.68
SMARCE1-208ENST00000474246 LAIR2Q6ISS4 152 aa4.55□□□□□ -1.68
SMARCE1-208ENST00000474246 MDP1Q86V88 176 aa4.55□□□□□ -1.68
SMARCE1-208ENST00000474246 CEND1Q8N111 149 aa4.55□□□□□ -1.68
SMARCE1-208ENST00000474246 OR8B3Q8NGG8 313 aa4.55□□□□□ -1.68
SMARCE1-208ENST00000474246 VSIG2Q96IQ7 327 aa4.55□□□□□ -1.68
SMARCE1-208ENST00000474246 PGLYRP2Q96PD5 576 aa4.55□□□□□ -1.68
SMARCE1-208ENST00000474246 RHNO1Q9BSD3 238 aa4.55□□□□□ -1.68
SMARCE1-208ENST00000474246 SCRT1Q9BWW7 348 aa4.55□□□□□ -1.68
SMARCE1-208ENST00000474246 GABARAPL3Q9BY60 117 aa4.55□□□□□ -1.68
SMARCE1-208ENST00000474246 ZANQ9Y493 2812 aa4.54□□□□□ -1.68
SMARCE1-208ENST00000474246 IGKV1-8A0A0C4DH67 115 aa4.54□□□□□ -1.68
SMARCE1-208ENST00000474246 UBE2L5PA0A1B0GUS4 154 aa4.54□□□□□ -1.68
SMARCE1-208ENST00000474246 MGST3O14880 152 aa4.54□□□□□ -1.68
SMARCE1-208ENST00000474246 IGKV1-5P01602 117 aa4.54□□□□□ -1.68
SMARCE1-208ENST00000474246 HBDP02042 147 aa4.54□□□□□ -1.68
SMARCE1-208ENST00000474246 SRP19P09132 144 aaKnown RBP4.54□□□□□ -1.68
SMARCE1-208ENST00000474246 IGLL1P15814 213 aa4.54□□□□□ -1.68
SMARCE1-208ENST00000474246 ZNF136P52737 540 aa4.54□□□□□ -1.68
SMARCE1-208ENST00000474246 UBE2L3P68036 154 aaKnown RBP4.54□□□□□ -1.68
SMARCE1-208ENST00000474246 Q8N2B8 174 aa4.54□□□□□ -1.68
SMARCE1-208ENST00000474246 ZNF286AQ9HBT8 521 aa4.54□□□□□ -1.68
SMARCE1-208ENST00000474246 LINC00588Q9Y4M8 146 aa4.54□□□□□ -1.68
SMARCE1-208ENST00000474246 IGHV4-28A0A0C4DH34 117 aa4.54□□□□□ -1.68
SMARCE1-208ENST00000474246 KLF18A0A0U1RQI7 1052 aa4.54□□□□□ -1.68
SMARCE1-208ENST00000474246 hADV29S1A0JD25 119 aa4.54□□□□□ -1.68
SMARCE1-208ENST00000474246 LINC00473A8K010 186 aa4.54□□□□□ -1.68
SMARCE1-208ENST00000474246 DYNLT3P51808 116 aa4.54□□□□□ -1.68
SMARCE1-208ENST00000474246 ATP5EP56381 51 aaPredicted RBP4.54□□□□□ -1.68
SMARCE1-208ENST00000474246 BRWD1-AS2P59051 145 aa4.54□□□□□ -1.68
SMARCE1-208ENST00000474246 CFAP126Q5VTH2 177 aa4.54□□□□□ -1.68
SMARCE1-208ENST00000474246 MIC13Q5XKP0 118 aa4.54□□□□□ -1.68
SMARCE1-208ENST00000474246 TIFABQ6ZNK6 161 aa4.54□□□□□ -1.68
SMARCE1-208ENST00000474246 TMEM243Q9BU79 118 aa4.54□□□□□ -1.68
SMARCE1-208ENST00000474246 CST11Q9H112 138 aa4.54□□□□□ -1.68
SMARCE1-208ENST00000474246 C6orf106Q9H6K1 298 aaPredicted RBP4.54□□□□□ -1.68
SMARCE1-208ENST00000474246 CYTL1Q9NRR1 136 aa4.54□□□□□ -1.68
SMARCE1-208ENST00000474246 EPDR1Q9UM22 224 aa4.54□□□□□ -1.68
SMARCE1-208ENST00000474246 DIDO1Q9BTC0 2240 aaKnown RBP4.53□□□□□ -1.68
SMARCE1-208ENST00000474246 SCN2AQ99250 2005 aa4.53□□□□□ -1.68
SMARCE1-208ENST00000474246 IGKV1-27A0A075B6S5 117 aa4.53□□□□□ -1.68
SMARCE1-208ENST00000474246 K7ERJ3 54 aa4.53□□□□□ -1.68
SMARCE1-208ENST00000474246 ZNF324O75467 553 aaPredicted RBP4.53□□□□□ -1.68
SMARCE1-208ENST00000474246 ZNF138P52744 262 aa4.53□□□□□ -1.68
SMARCE1-208ENST00000474246 CCL8P80075 99 aa4.53□□□□□ -1.68
SMARCE1-208ENST00000474246 CXCL6P80162 114 aa4.53□□□□□ -1.68
SMARCE1-208ENST00000474246 Q6ZQT7 251 aa4.53□□□□□ -1.68
SMARCE1-208ENST00000474246 LINC00173Q6ZV60 143 aa4.53□□□□□ -1.68
SMARCE1-208ENST00000474246 OR5AS1Q8N127 324 aa4.53□□□□□ -1.68
SMARCE1-208ENST00000474246 TOMM5Q8N4H5 51 aa4.53□□□□□ -1.68
SMARCE1-208ENST00000474246 ZNF702PQ9H963 129 aa4.53□□□□□ -1.68
SMARCE1-208ENST00000474246 PRKDCP78527 4128 aaKnown RBP4.53□□□□□ -1.68
SMARCE1-208ENST00000474246 DYSFO75923 2080 aa4.53□□□□□ -1.68
SMARCE1-208ENST00000474246 MDFIC2A0A1B0GVS7 189 aa4.52□□□□□ -1.69
SMARCE1-208ENST00000474246 NUPR1O60356 82 aa4.52□□□□□ -1.69
SMARCE1-208ENST00000474246 S100A4P26447 101 aaKnown RBP4.52□□□□□ -1.69
SMARCE1-208ENST00000474246 Q0VFX4 171 aa4.52□□□□□ -1.69
SMARCE1-208ENST00000474246 ZNF678Q5SXM1 525 aa4.52□□□□□ -1.69
SMARCE1-208ENST00000474246 Q6ZPA2 131 aa4.52□□□□□ -1.69
SMARCE1-208ENST00000474246 HMGN2P46Q86SG4 172 aa4.52□□□□□ -1.69
SMARCE1-208ENST00000474246 NFE4Q86UQ8 179 aa4.52□□□□□ -1.69
SMARCE1-208ENST00000474246 ZNF584Q8IVC4 421 aa4.52□□□□□ -1.69
SMARCE1-208ENST00000474246 TSKUQ8WUA8 353 aa4.52□□□□□ -1.69
SMARCE1-208ENST00000474246 PARP12Q9H0J9 701 aaKnown RBP4.52□□□□□ -1.69
SMARCE1-208ENST00000474246 MANBALQ9NQG1 85 aa4.52□□□□□ -1.69
SMARCE1-208ENST00000474246 ZNF706Q9Y5V0 76 aaPredicted RBP4.52□□□□□ -1.69
SMARCE1-208ENST00000474246 TENM3Q9P273 2699 aa4.52□□□□□ -1.69
SMARCE1-208ENST00000474246 TRAV2A0A0B4J234 112 aa4.52□□□□□ -1.69
SMARCE1-208ENST00000474246 BUB1B-PAK6H3BSN5 160 aa4.52□□□□□ -1.69
SMARCE1-208ENST00000474246 ZNF823P16415 610 aa4.52□□□□□ -1.69
SMARCE1-208ENST00000474246 SYNJ2BPP57105 145 aa4.52□□□□□ -1.69
SMARCE1-208ENST00000474246 ZNF876PQ49A33 203 aa4.52□□□□□ -1.69
SMARCE1-208ENST00000474246 C1orf100Q5SVJ3 147 aa4.52□□□□□ -1.69
SMARCE1-208ENST00000474246 MARCH3Q86UD3 253 aa4.52□□□□□ -1.69
SMARCE1-208ENST00000474246 GPHB5Q86YW7 130 aa4.52□□□□□ -1.69
SMARCE1-208ENST00000474246 TMEM256Q8N2U0 113 aa4.52□□□□□ -1.69
SMARCE1-208ENST00000474246 OPRPNQ99935 248 aaPredicted RBP4.52□□□□□ -1.69
SMARCE1-208ENST00000474246 SLC25A15Q9Y619 301 aa4.52□□□□□ -1.69
SMARCE1-208ENST00000474246 DOCK4Q8N1I0 1966 aa4.52□□□□□ -1.69
SMARCE1-208ENST00000474246 VPS13CQ709C8 3753 aa4.51□□□□□ -1.69
SMARCE1-208ENST00000474246 IGHV3OR16-12A0A075B7B8 117 aa4.51□□□□□ -1.69
SMARCE1-208ENST00000474246 TRAV14DV4A0A0A6YYC5 116 aa4.51□□□□□ -1.69
SMARCE1-208ENST00000474246 C19orf84I3L1E1 186 aa4.51□□□□□ -1.69
SMARCE1-208ENST00000474246 K7ESM1 405 aa4.51□□□□□ -1.69
SMARCE1-208ENST00000474246 C1QAP02745 245 aa4.51□□□□□ -1.69
SMARCE1-208ENST00000474246 FRMD6-AS1P0C7T7 363 aa4.51□□□□□ -1.69
SMARCE1-208ENST00000474246 IGHV4-30-4P0DP06 118 aa4.51□□□□□ -1.69
SMARCE1-208ENST00000474246 C7orf65Q6ZTY9 151 aa4.51□□□□□ -1.69
SMARCE1-208ENST00000474246 OR8B2Q96RD0 313 aa4.51□□□□□ -1.69
SMARCE1-208ENST00000474246 SCRT2Q9NQ03 307 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms