RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 ZNF138P52744 262 aa3.37□□□□□ -1.87
SNRNP40-204ENST00000474025 PTTG1IPP53801 180 aa3.37□□□□□ -1.87
SNRNP40-204ENST00000474025 RAB31Q13636 194 aa3.37□□□□□ -1.87
SNRNP40-204ENST00000474025 ZNF266Q14584 549 aa3.37□□□□□ -1.87
SNRNP40-204ENST00000474025 IAH1Q2TAA2 248 aaPredicted RBP3.37□□□□□ -1.87
SNRNP40-204ENST00000474025 TDRG1Q3Y452 100 aa3.37□□□□□ -1.87
SNRNP40-204ENST00000474025 OR10J3Q5JRS4 329 aa3.37□□□□□ -1.87
SNRNP40-204ENST00000474025 DGAT2L7PQ6IED9 249 aa3.37□□□□□ -1.87
SNRNP40-204ENST00000474025 TOMM5Q8N4H5 51 aa3.37□□□□□ -1.87
SNRNP40-204ENST00000474025 CIRBP-AS1Q8TBR5 109 aa3.37□□□□□ -1.87
SNRNP40-204ENST00000474025 DEDD2Q8WXF8 326 aa3.37□□□□□ -1.87
SNRNP40-204ENST00000474025 TM2D2Q9BX73 214 aa3.37□□□□□ -1.87
SNRNP40-204ENST00000474025 SLIRPQ9GZT3 109 aaKnown RBP3.37□□□□□ -1.87
SNRNP40-204ENST00000474025 WDR83OSQ9Y284 106 aa3.37□□□□□ -1.87
SNRNP40-204ENST00000474025 TIMM9Q9Y5J7 89 aa3.37□□□□□ -1.87
SNRNP40-204ENST00000474025 LPAP08519 4548 aa3.36□□□□□ -1.87
SNRNP40-204ENST00000474025 TRGV11A0A075B6L2 103 aa3.36□□□□□ -1.87
SNRNP40-204ENST00000474025 TRAV8-6A0A0B4J262 113 aa3.36□□□□□ -1.87
SNRNP40-204ENST00000474025 TRAV34A0A0B4J273 112 aa3.36□□□□□ -1.87
SNRNP40-204ENST00000474025 IGHV3-16A0A0C4DH30 117 aa3.36□□□□□ -1.87
SNRNP40-204ENST00000474025 CST7O76096 145 aa3.36□□□□□ -1.87
SNRNP40-204ENST00000474025 MBPP02686 304 aaPredicted RBP3.36□□□□□ -1.87
SNRNP40-204ENST00000474025 RPL29P47914 159 aaKnown RBP3.36□□□□□ -1.87
SNRNP40-204ENST00000474025 HNRNPA3P51991 378 aaKnown RBP3.36□□□□□ -1.87
SNRNP40-204ENST00000474025 ASAH1Q13510 395 aa3.36□□□□□ -1.87
SNRNP40-204ENST00000474025 TMEM183BQ1AE95 376 aa3.36□□□□□ -1.87
SNRNP40-204ENST00000474025 VWC2Q2TAL6 325 aa3.36□□□□□ -1.87
SNRNP40-204ENST00000474025 PYDC2Q56P42 97 aa3.36□□□□□ -1.87
SNRNP40-204ENST00000474025 GCSAMLQ5JQS6 135 aa3.36□□□□□ -1.87
SNRNP40-204ENST00000474025 LELP1Q5T871 98 aa3.36□□□□□ -1.87
SNRNP40-204ENST00000474025 Q6AWC8 147 aa3.36□□□□□ -1.87
SNRNP40-204ENST00000474025 FAM122CQ6P4D5 195 aa3.36□□□□□ -1.87
SNRNP40-204ENST00000474025 TMEM183AQ8IXX5 376 aa3.36□□□□□ -1.87
SNRNP40-204ENST00000474025 C12orf45Q8N5I9 185 aaPredicted RBP3.36□□□□□ -1.87
SNRNP40-204ENST00000474025 OR4C5Q8NGB2 326 aa3.36□□□□□ -1.87
SNRNP40-204ENST00000474025 FAM167A-AS1Q96KT0 104 aa3.36□□□□□ -1.87
SNRNP40-204ENST00000474025 AAMDCQ9H7C9 122 aa3.36□□□□□ -1.87
SNRNP40-204ENST00000474025 SLC39A9Q9NUM3 307 aa3.36□□□□□ -1.87
SNRNP40-204ENST00000474025 UQCC1Q9NVA1 299 aa3.36□□□□□ -1.87
SNRNP40-204ENST00000474025 FLVCR2Q9UPI3 526 aa3.36□□□□□ -1.87
SNRNP40-204ENST00000474025 V9GYH0 126 aa3.36□□□□□ -1.87
SNRNP40-204ENST00000474025 UBE2L5PA0A1B0GUS4 154 aa3.35□□□□□ -1.87
SNRNP40-204ENST00000474025 M0R2P5 195 aa3.35□□□□□ -1.87
SNRNP40-204ENST00000474025 NDUFB6O95139 128 aa3.35□□□□□ -1.87
SNRNP40-204ENST00000474025 IGLV2-8P01709 118 aa3.35□□□□□ -1.87
SNRNP40-204ENST00000474025 PFN1P07737 140 aaKnown RBP3.35□□□□□ -1.87
SNRNP40-204ENST00000474025 MT1HL1P0DM35 61 aa3.35□□□□□ -1.87
SNRNP40-204ENST00000474025 ACOT6Q3I5F7 207 aaPredicted RBP3.35□□□□□ -1.87
SNRNP40-204ENST00000474025 MAJINQ3KP22 176 aa3.35□□□□□ -1.87
SNRNP40-204ENST00000474025 FAM159AQ6UWV7 190 aa3.35□□□□□ -1.87
SNRNP40-204ENST00000474025 SLC25A29Q8N8R3 303 aa3.35□□□□□ -1.87
SNRNP40-204ENST00000474025 BAALCQ8WXS3 180 aa3.35□□□□□ -1.87
SNRNP40-204ENST00000474025 PHYHIPLQ96FC7 376 aa3.35□□□□□ -1.87
SNRNP40-204ENST00000474025 BCL7BQ9BQE9 202 aa3.35□□□□□ -1.87
SNRNP40-204ENST00000474025 SLC25A2Q9BXI2 301 aa3.35□□□□□ -1.87
SNRNP40-204ENST00000474025 C11orf1Q9H5F2 150 aa3.35□□□□□ -1.87
SNRNP40-204ENST00000474025 GSKIPQ9P0R6 139 aa3.35□□□□□ -1.87
SNRNP40-204ENST00000474025 NAGKQ9UJ70 344 aa3.35□□□□□ -1.87
SNRNP40-204ENST00000474025 TRAV8-3A0A0A6YYJ7 113 aa3.34□□□□□ -1.87
SNRNP40-204ENST00000474025 A4D1N5 150 aa3.34□□□□□ -1.87
SNRNP40-204ENST00000474025 RBAKDNA6NC62 111 aa3.34□□□□□ -1.87
SNRNP40-204ENST00000474025 RBFOX3A6NFN3 312 aa3.34□□□□□ -1.87
SNRNP40-204ENST00000474025 FBLL1A6NHQ2 334 aaKnown RBP3.34□□□□□ -1.87
SNRNP40-204ENST00000474025 L7N2F9 121 aa3.34□□□□□ -1.87
SNRNP40-204ENST00000474025 CCSO14618 274 aa3.34□□□□□ -1.87
SNRNP40-204ENST00000474025 GNRH2O43555 120 aa3.34□□□□□ -1.87
SNRNP40-204ENST00000474025 IGLV2-11P01706 119 aa3.34□□□□□ -1.87
SNRNP40-204ENST00000474025 NBEAP1P0C6P0 100 aa3.34□□□□□ -1.87
SNRNP40-204ENST00000474025 FGF7P21781 194 aa3.34□□□□□ -1.87
SNRNP40-204ENST00000474025 BCAP31P51572 246 aa3.34□□□□□ -1.87
SNRNP40-204ENST00000474025 CAV2P51636 162 aa3.34□□□□□ -1.87
SNRNP40-204ENST00000474025 TMBIM6P55061 237 aa3.34□□□□□ -1.87
SNRNP40-204ENST00000474025 RPL37AP61513 92 aaKnown RBP3.34□□□□□ -1.87
SNRNP40-204ENST00000474025 BAXQ07812 192 aa3.34□□□□□ -1.87
SNRNP40-204ENST00000474025 RHOHQ15669 191 aa3.34□□□□□ -1.87
SNRNP40-204ENST00000474025 DPPA3Q6W0C5 159 aa3.34□□□□□ -1.87
SNRNP40-204ENST00000474025 MIR17HGQ75NE6 70 aa3.34□□□□□ -1.87
SNRNP40-204ENST00000474025 DAZ4Q86SG3 579 aaKnown RBP3.34□□□□□ -1.87
SNRNP40-204ENST00000474025 NUDT10Q8NFP7 164 aa3.34□□□□□ -1.87
SNRNP40-204ENST00000474025 MITD1Q8WV92 249 aa3.34□□□□□ -1.87
SNRNP40-204ENST00000474025 FXYD5Q96DB9 178 aa3.34□□□□□ -1.87
SNRNP40-204ENST00000474025 DAZAP1Q96EP5 407 aaKnown RBP3.34□□□□□ -1.87
SNRNP40-204ENST00000474025 NUDT11Q96G61 164 aa3.34□□□□□ -1.87
SNRNP40-204ENST00000474025 PRADC1Q9BSG0 188 aa3.34□□□□□ -1.87
SNRNP40-204ENST00000474025 MRPS26Q9BYN8 205 aaKnown RBP3.34□□□□□ -1.87
SNRNP40-204ENST00000474025 GTSF1LQ9H1H1 148 aa3.34□□□□□ -1.87
SNRNP40-204ENST00000474025 C20orf85Q9H1P6 137 aa3.34□□□□□ -1.87
SNRNP40-204ENST00000474025 GPN1Q9HCN4 374 aaPredicted RBP3.34□□□□□ -1.87
SNRNP40-204ENST00000474025 DAZ3Q9NR90 486 aaKnown RBP3.34□□□□□ -1.87
SNRNP40-204ENST00000474025 LENEPQ9Y5L5 61 aa3.34□□□□□ -1.87
SNRNP40-204ENST00000474025 A0A0U1RQV1 116 aa3.33□□□□□ -1.88
SNRNP40-204ENST00000474025 TRBV6-4A0A1B0GX49 114 aa3.33□□□□□ -1.88
SNRNP40-204ENST00000474025 IGSF23A1L1A6 192 aa3.33□□□□□ -1.88
SNRNP40-204ENST00000474025 RNF222A6NCQ9 220 aa3.33□□□□□ -1.88
SNRNP40-204ENST00000474025 C5orf51A6NDU8 294 aa3.33□□□□□ -1.88
SNRNP40-204ENST00000474025 FAM24AA6NFZ4 105 aa3.33□□□□□ -1.88
SNRNP40-204ENST00000474025 GAGE10A6NGK3 116 aa3.33□□□□□ -1.88
SNRNP40-204ENST00000474025 H3BMQ9 156 aa3.33□□□□□ -1.88
SNRNP40-204ENST00000474025 TYMSP04818 313 aa3.33□□□□□ -1.88
SNRNP40-204ENST00000474025 OR10J4P0C629 311 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms