RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 PPP1R14DQ9NXH3 145 aa6.48□□□□□ -1.37
MCF2L-223ENST00000473345 LRCOL1A6NCL2 159 aa6.47□□□□□ -1.37
MCF2L-223ENST00000473345 NPIPB6E9PJ23 425 aa6.47□□□□□ -1.37
MCF2L-223ENST00000473345 TEX46H3BTG2 121 aa6.47□□□□□ -1.37
MCF2L-223ENST00000473345 COX7A2P2O60397 106 aa6.47□□□□□ -1.37
MCF2L-223ENST00000473345 ZNF324O75467 553 aaPredicted RBP6.47□□□□□ -1.37
MCF2L-223ENST00000473345 CXorf1O96002 111 aa6.47□□□□□ -1.37
MCF2L-223ENST00000473345 IGLC2P0DOY2 106 aa6.47□□□□□ -1.37
MCF2L-223ENST00000473345 GUK1Q16774 197 aa6.47□□□□□ -1.37
MCF2L-223ENST00000473345 UQCC3Q6UW78 93 aa6.47□□□□□ -1.37
MCF2L-223ENST00000473345 PQLC2Q6ZP29 291 aa6.47□□□□□ -1.37
MCF2L-223ENST00000473345 LINC00305Q7Z4B0 112 aa6.47□□□□□ -1.37
MCF2L-223ENST00000473345 COMMD7Q86VX2 200 aa6.47□□□□□ -1.37
MCF2L-223ENST00000473345 FAM19A4Q96LR4 140 aa6.47□□□□□ -1.37
MCF2L-223ENST00000473345 ODF3Q96PU9 254 aa6.47□□□□□ -1.37
MCF2L-223ENST00000473345 KRTAP3-3Q9BYR6 98 aa6.47□□□□□ -1.37
MCF2L-223ENST00000473345 KRTAP3-2Q9BYR7 98 aa6.47□□□□□ -1.37
MCF2L-223ENST00000473345 SMDT1Q9H4I9 107 aa6.47□□□□□ -1.37
MCF2L-223ENST00000473345 TRGV1A0A0A0MS02 117 aa6.46□□□□□ -1.38
MCF2L-223ENST00000473345 SNURFLB1AK76 121 aa6.46□□□□□ -1.38
MCF2L-223ENST00000473345 M0R3E3 92 aa6.46□□□□□ -1.38
MCF2L-223ENST00000473345 SPINK4O60575 86 aa6.46□□□□□ -1.38
MCF2L-223ENST00000473345 ARL14EPLP0DKL9 152 aa6.46□□□□□ -1.38
MCF2L-223ENST00000473345 GCSHP23434 173 aa6.46□□□□□ -1.38
MCF2L-223ENST00000473345 GCHFRP30047 84 aa6.46□□□□□ -1.38
MCF2L-223ENST00000473345 FGF8P55075 233 aaPredicted RBP6.46□□□□□ -1.38
MCF2L-223ENST00000473345 TAS2R45P59539 299 aa6.46□□□□□ -1.38
MCF2L-223ENST00000473345 BTN1A1Q13410 526 aa6.46□□□□□ -1.38
MCF2L-223ENST00000473345 FHL2Q14192 279 aa6.46□□□□□ -1.38
MCF2L-223ENST00000473345 KHDC3LQ587J8 217 aa6.46□□□□□ -1.38
MCF2L-223ENST00000473345 Q6ZSN1 163 aa6.46□□□□□ -1.38
MCF2L-223ENST00000473345 BPIFA4PQ86YQ2 179 aa6.46□□□□□ -1.38
MCF2L-223ENST00000473345 CCDC28AQ8IWP9 274 aa6.46□□□□□ -1.38
MCF2L-223ENST00000473345 SLC25A2Q9BXI2 301 aa6.46□□□□□ -1.38
MCF2L-223ENST00000473345 MRPL16Q9NX20 251 aaKnown RBP6.46□□□□□ -1.38
MCF2L-223ENST00000473345 TMEM14CQ9P0S9 112 aa6.46□□□□□ -1.38
MCF2L-223ENST00000473345 ARL2-SNX15V9GYD0 113 aa6.46□□□□□ -1.38
MCF2L-223ENST00000473345 DNAH8Q96JB1 4490 aa6.46□□□□□ -1.38
MCF2L-223ENST00000473345 RBFOX3A6NFN3 312 aa6.45□□□□□ -1.38
MCF2L-223ENST00000473345 HMGB3O15347 200 aaKnown RBP6.45□□□□□ -1.38
MCF2L-223ENST00000473345 ZNF253O75346 499 aa6.45□□□□□ -1.38
MCF2L-223ENST00000473345 EIF3GO75821 320 aaKnown RBP eCLIP6.45□□□□□ -1.38
MCF2L-223ENST00000473345 TAGLN2P37802 199 aaKnown RBP6.45□□□□□ -1.38
MCF2L-223ENST00000473345 PPT1P50897 306 aa6.45□□□□□ -1.38
MCF2L-223ENST00000473345 CRYBA4P53673 196 aa6.45□□□□□ -1.38
MCF2L-223ENST00000473345 KRTAP10-4P60372 401 aaPredicted RBP6.45□□□□□ -1.38
MCF2L-223ENST00000473345 SRSF3P84103 164 aaKnown RBP6.45□□□□□ -1.38
MCF2L-223ENST00000473345 ZNF506Q5JVG8 444 aa6.45□□□□□ -1.38
MCF2L-223ENST00000473345 C8orf49Q96NF6 230 aa6.45□□□□□ -1.38
MCF2L-223ENST00000473345 LINC00467Q9BRT7 94 aa6.45□□□□□ -1.38
MCF2L-223ENST00000473345 TMEM167BQ9NRX6 74 aa6.45□□□□□ -1.38
MCF2L-223ENST00000473345 UBR4Q5T4S7 5183 aa6.44□□□□□ -1.38
MCF2L-223ENST00000473345 TRGV2A0A075B6R0 118 aa6.44□□□□□ -1.38
MCF2L-223ENST00000473345 A0A1B0GV50 99 aa6.44□□□□□ -1.38
MCF2L-223ENST00000473345 KLLNB2CW77 178 aa6.44□□□□□ -1.38
MCF2L-223ENST00000473345 PAX4O43316 350 aa6.44□□□□□ -1.38
MCF2L-223ENST00000473345 ATP6V1G1O75348 118 aa6.44□□□□□ -1.38
MCF2L-223ENST00000473345 NDUFB4O95168 129 aa6.44□□□□□ -1.38
MCF2L-223ENST00000473345 BCL2P10415 239 aa6.44□□□□□ -1.38
MCF2L-223ENST00000473345 WFDC2Q14508 124 aa6.44□□□□□ -1.38
MCF2L-223ENST00000473345 ZFAND2AQ8N6M9 145 aa6.44□□□□□ -1.38
MCF2L-223ENST00000473345 FXYD5Q96DB9 178 aa6.44□□□□□ -1.38
MCF2L-223ENST00000473345 MRPL53Q96EL3 112 aaKnown RBP6.44□□□□□ -1.38
MCF2L-223ENST00000473345 TXNDC17Q9BRA2 123 aa6.44□□□□□ -1.38
MCF2L-223ENST00000473345 PYGO2Q9BRQ0 406 aa6.44□□□□□ -1.38
MCF2L-223ENST00000473345 AGPAT4-IT1Q9H0P7 198 aa6.44□□□□□ -1.38
MCF2L-223ENST00000473345 OR51M1Q9H341 326 aa6.44□□□□□ -1.38
MCF2L-223ENST00000473345 MANBALQ9NQG1 85 aa6.44□□□□□ -1.38
MCF2L-223ENST00000473345 VAX2Q9UIW0 290 aa6.44□□□□□ -1.38
MCF2L-223ENST00000473345 LRP1Q07954 4544 aaKnown RBP6.43□□□□□ -1.38
MCF2L-223ENST00000473345 LOC100131303A0A0U1RQF7 123 aa6.43□□□□□ -1.38
MCF2L-223ENST00000473345 A0A1W2PRE2 83 aa6.43□□□□□ -1.38
MCF2L-223ENST00000473345 KRTAP29-1A8MX34 341 aaPredicted RBP6.43□□□□□ -1.38
MCF2L-223ENST00000473345 C9JQL5 133 aa6.43□□□□□ -1.38
MCF2L-223ENST00000473345 J3QL48 77 aa6.43□□□□□ -1.38
MCF2L-223ENST00000473345 K7EP13 123 aa6.43□□□□□ -1.38
MCF2L-223ENST00000473345 IFNA1P01562 189 aa6.43□□□□□ -1.38
MCF2L-223ENST00000473345 SFTA3P0C7M3 94 aa6.43□□□□□ -1.38
MCF2L-223ENST00000473345 HIST1H1EP10412 219 aaKnown RBP6.43□□□□□ -1.38
MCF2L-223ENST00000473345 LEPP41159 167 aa6.43□□□□□ -1.38
MCF2L-223ENST00000473345 TCL1AP56279 114 aa6.43□□□□□ -1.38
MCF2L-223ENST00000473345 PEA15Q15121 130 aa6.43□□□□□ -1.38
MCF2L-223ENST00000473345 TOR2AQ5JU69 321 aa6.43□□□□□ -1.38
MCF2L-223ENST00000473345 C10orf91Q5T1B1 145 aa6.43□□□□□ -1.38
MCF2L-223ENST00000473345 PAXXQ9BUH6 204 aa6.43□□□□□ -1.38
MCF2L-223ENST00000473345 MSRB1Q9NZV6 116 aa6.43□□□□□ -1.38
MCF2L-223ENST00000473345 GNG13Q9P2W3 67 aa6.43□□□□□ -1.38
MCF2L-223ENST00000473345 ICOSQ9Y6W8 199 aa6.43□□□□□ -1.38
MCF2L-223ENST00000473345 TMEM218A2RU14 115 aa6.42□□□□□ -1.38
MCF2L-223ENST00000473345 C7orf71A4D174 169 aa6.42□□□□□ -1.38
MCF2L-223ENST00000473345 FAM74A7A6NL05 159 aa6.42□□□□□ -1.38
MCF2L-223ENST00000473345 TMEM250H0YL14 139 aa6.42□□□□□ -1.38
MCF2L-223ENST00000473345 K7EQD1 137 aa6.42□□□□□ -1.38
MCF2L-223ENST00000473345 EREGO14944 169 aa6.42□□□□□ -1.38
MCF2L-223ENST00000473345 OR7C2O60412 319 aa6.42□□□□□ -1.38
MCF2L-223ENST00000473345 PAGE4O60829 102 aa6.42□□□□□ -1.38
MCF2L-223ENST00000473345 SRP19P09132 144 aaKnown RBP6.42□□□□□ -1.38
MCF2L-223ENST00000473345 NBEAP1P0C6P0 100 aa6.42□□□□□ -1.38
MCF2L-223ENST00000473345 PYYP10082 97 aa6.42□□□□□ -1.38
MCF2L-223ENST00000473345 MEF2BQ02080 365 aaPredicted RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms