RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 ARL6IP6Q8N6S5 226 aa13.28□□□□□ -0.28
COL7A1-207ENST00000467985 GNG13Q9P2W3 67 aa13.28□□□□□ -0.28
COL7A1-207ENST00000467985 RPH3ALQ9UNE2 315 aa13.28□□□□□ -0.28
COL7A1-207ENST00000467985 PGPA6NDG6 321 aa13.27□□□□□ -0.29
COL7A1-207ENST00000467985 CST9LP1Q5W188 147 aa13.27□□□□□ -0.29
COL7A1-207ENST00000467985 MANBALQ9NQG1 85 aa13.27□□□□□ -0.29
COL7A1-207ENST00000467985 KLF12Q9Y4X4 402 aa13.27□□□□□ -0.29
COL7A1-207ENST00000467985 A0A1W2PRE2 83 aa13.26□□□□□ -0.29
COL7A1-207ENST00000467985 ZNF415Q09FC8 603 aa13.26□□□□□ -0.29
COL7A1-207ENST00000467985 SUN5Q8TC36 379 aa13.26□□□□□ -0.29
COL7A1-207ENST00000467985 PCNPQ8WW12 178 aaKnown RBP13.26□□□□□ -0.29
COL7A1-207ENST00000467985 TP53TG3Q9ULZ0 132 aa13.26□□□□□ -0.29
COL7A1-207ENST00000467985 PAGE4O60829 102 aa13.25□□□□□ -0.29
COL7A1-207ENST00000467985 NKX6-2Q9C056 277 aaPredicted RBP13.25□□□□□ -0.29
COL7A1-207ENST00000467985 Q9H8V8 135 aa13.25□□□□□ -0.29
COL7A1-207ENST00000467985 KIAA1109Q2LD37 5005 aa13.25□□□□□ -0.29
COL7A1-207ENST00000467985 FAM74A7A6NL05 159 aa13.24□□□□□ -0.29
COL7A1-207ENST00000467985 SUMO1P63165 101 aaKnown RBP13.24□□□□□ -0.29
COL7A1-207ENST00000467985 CCL20P78556 96 aa13.24□□□□□ -0.29
COL7A1-207ENST00000467985 TTC32Q5I0X7 151 aa13.24□□□□□ -0.29
COL7A1-207ENST00000467985 Q6AWC8 147 aa13.24□□□□□ -0.29
COL7A1-207ENST00000467985 Q6ZQT7 251 aa13.24□□□□□ -0.29
COL7A1-207ENST00000467985 C6orf223Q8N319 242 aa13.24□□□□□ -0.29
COL7A1-207ENST00000467985 UPK3BQ9BT76 320 aa13.24□□□□□ -0.29
COL7A1-207ENST00000467985 ARL2-SNX15V9GYD0 113 aa13.24□□□□□ -0.29
COL7A1-207ENST00000467985 MUC4Q99102 2169 aa13.24□□□□□ -0.29
COL7A1-207ENST00000467985 SLAQ13239 276 aa13.23□□□□□ -0.29
COL7A1-207ENST00000467985 FAM159AQ6UWV7 190 aa13.23□□□□□ -0.29
COL7A1-207ENST00000467985 C5orf17Q8NAS9 161 aa13.23□□□□□ -0.29
COL7A1-207ENST00000467985 VSIG2Q96IQ7 327 aa13.23□□□□□ -0.29
COL7A1-207ENST00000467985 GGTLC3B5MD39 225 aa13.22□□□□□ -0.29
COL7A1-207ENST00000467985 IFITM2Q01629 132 aa13.22□□□□□ -0.29
COL7A1-207ENST00000467985 ESRGQ1W209 222 aa13.22□□□□□ -0.29
COL7A1-207ENST00000467985 MRPL16Q9NX20 251 aaKnown RBP13.22□□□□□ -0.29
COL7A1-207ENST00000467985 MRPS16Q9Y3D3 137 aaKnown RBP13.22□□□□□ -0.29
COL7A1-207ENST00000467985 TRGV11A0A075B6L2 103 aa13.21□□□□□ -0.29
COL7A1-207ENST00000467985 K7EQM0 130 aa13.21□□□□□ -0.29
COL7A1-207ENST00000467985 MED14OSP0DP75 135 aa13.21□□□□□ -0.29
COL7A1-207ENST00000467985 TAGLN2P37802 199 aaKnown RBP13.21□□□□□ -0.29
COL7A1-207ENST00000467985 MUC21Q5SSG8 566 aa13.21□□□□□ -0.29
COL7A1-207ENST00000467985 GOLT1AQ6ZVE7 132 aa13.21□□□□□ -0.29
COL7A1-207ENST00000467985 SPXQ9BT56 116 aa13.21□□□□□ -0.29
COL7A1-207ENST00000467985 DNAH11Q96DT5 4516 aa13.21□□□□□ -0.29
COL7A1-207ENST00000467985 A0A096LPF7 62 aa13.2□□□□□ -0.3
COL7A1-207ENST00000467985 SERTM2A0A1B0GWG4 89 aa13.2□□□□□ -0.3
COL7A1-207ENST00000467985 A0A1W2PPQ1 181 aa13.2□□□□□ -0.3
COL7A1-207ENST00000467985 F6UZH7 168 aa13.2□□□□□ -0.3
COL7A1-207ENST00000467985 PAX4O43316 350 aa13.2□□□□□ -0.3
COL7A1-207ENST00000467985 BCL2P10415 239 aa13.2□□□□□ -0.3
COL7A1-207ENST00000467985 GNG5P63218 68 aa13.2□□□□□ -0.3
COL7A1-207ENST00000467985 TDRG1Q3Y452 100 aa13.2□□□□□ -0.3
COL7A1-207ENST00000467985 PRO0255Q9UI72 69 aa13.2□□□□□ -0.3
COL7A1-207ENST00000467985 TMEM183BQ1AE95 376 aa13.19□□□□□ -0.3
COL7A1-207ENST00000467985 TMEM183AQ8IXX5 376 aa13.19□□□□□ -0.3
COL7A1-207ENST00000467985 LYPD6BQ8NI32 183 aa13.19□□□□□ -0.3
COL7A1-207ENST00000467985 TXNDC17Q9BRA2 123 aa13.19□□□□□ -0.3
COL7A1-207ENST00000467985 EPDR1Q9UM22 224 aa13.19□□□□□ -0.3
COL7A1-207ENST00000467985 ICOSQ9Y6W8 199 aa13.19□□□□□ -0.3
COL7A1-207ENST00000467985 TRAV21A0A0B4J279 112 aa13.18□□□□□ -0.3
COL7A1-207ENST00000467985 IGHV3-53P01767 116 aa13.18□□□□□ -0.3
COL7A1-207ENST00000467985 BTF3P20290 206 aaKnown RBP13.18□□□□□ -0.3
COL7A1-207ENST00000467985 RASL10AQ92737 203 aa13.18□□□□□ -0.3
COL7A1-207ENST00000467985 TCEAL7Q9BRU2 100 aa13.18□□□□□ -0.3
COL7A1-207ENST00000467985 EIF5A2Q9GZV4 153 aaKnown RBP13.18□□□□□ -0.3
COL7A1-207ENST00000467985 TREM1Q9NP99 234 aa13.18□□□□□ -0.3
COL7A1-207ENST00000467985 MDFICQ9P1T7 246 aa13.18□□□□□ -0.3
COL7A1-207ENST00000467985 VAX2Q9UIW0 290 aa13.18□□□□□ -0.3
COL7A1-207ENST00000467985 HHLA3Q9XRX5 114 aa13.18□□□□□ -0.3
COL7A1-207ENST00000467985 RBFOX3A6NFN3 312 aa13.17□□□□□ -0.3
COL7A1-207ENST00000467985 PEX7O00628 323 aa13.17□□□□□ -0.3
COL7A1-207ENST00000467985 TCRAP04437 139 aa13.17□□□□□ -0.3
COL7A1-207ENST00000467985 MEF2BQ02080 365 aaPredicted RBP13.17□□□□□ -0.3
COL7A1-207ENST00000467985 TOR2AQ5JU69 321 aa13.17□□□□□ -0.3
COL7A1-207ENST00000467985 CYB561D1Q8N8Q1 229 aa13.17□□□□□ -0.3
COL7A1-207ENST00000467985 HIST1H2BAQ96A08 127 aa13.17□□□□□ -0.3
COL7A1-207ENST00000467985 NDFIP1Q9BT67 221 aa13.17□□□□□ -0.3
COL7A1-207ENST00000467985 NAGKQ9UJ70 344 aa13.17□□□□□ -0.3
COL7A1-207ENST00000467985 DYNC1H1Q14204 4646 aaKnown RBP13.17□□□□□ -0.3
COL7A1-207ENST00000467985 AKR1C3P42330 323 aa13.16□□□□□ -0.3
COL7A1-207ENST00000467985 CRYBA4P53673 196 aa13.16□□□□□ -0.3
COL7A1-207ENST00000467985 TNP2Q05952 138 aa13.16□□□□□ -0.3
COL7A1-207ENST00000467985 FHL2Q14192 279 aa13.16□□□□□ -0.3
COL7A1-207ENST00000467985 CLLU1Q5K131 121 aa13.16□□□□□ -0.3
COL7A1-207ENST00000467985 KCNS1Q96KK3 526 aa13.16□□□□□ -0.3
COL7A1-207ENST00000467985 TRAV8-1A0A0A6YYK1 113 aa13.15□□□□□ -0.3
COL7A1-207ENST00000467985 TRGV4A0A0C4DH28 118 aa13.15□□□□□ -0.3
COL7A1-207ENST00000467985 PDE6DO43924 150 aa13.15□□□□□ -0.3
COL7A1-207ENST00000467985 UBE2G1P62253 170 aa13.15□□□□□ -0.3
COL7A1-207ENST00000467985 MRPL23Q16540 153 aaKnown RBP13.15□□□□□ -0.3
COL7A1-207ENST00000467985 FAM210AQ96ND0 272 aa13.15□□□□□ -0.3
COL7A1-207ENST00000467985 C8orf49Q96NF6 230 aa13.15□□□□□ -0.3
COL7A1-207ENST00000467985 SCO2A0A1W2PP80 73 aa13.14□□□□□ -0.31
COL7A1-207ENST00000467985 ZNF506Q5JVG8 444 aa13.14□□□□□ -0.31
COL7A1-207ENST00000467985 TVP23CQ96ET8 276 aa13.14□□□□□ -0.31
COL7A1-207ENST00000467985 KRTAP1-5Q9BYS1 174 aa13.14□□□□□ -0.31
COL7A1-207ENST00000467985 SDF2L1Q9HCN8 221 aa13.14□□□□□ -0.31
COL7A1-207ENST00000467985 FBLL1A6NHQ2 334 aaKnown RBP13.13□□□□□ -0.31
COL7A1-207ENST00000467985 M0R2P5 195 aa13.13□□□□□ -0.31
COL7A1-207ENST00000467985 IGHV3-16A0A0C4DH30 117 aa13.12□□□□□ -0.31
COL7A1-207ENST00000467985 SIVA1O15304 175 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms