RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 LYRM9A8MSI8 78 aa11.46□□□□□ -0.57
GPC1-207ENST00000466624 FAM74A3Q4VXF1 159 aa11.46□□□□□ -0.57
GPC1-207ENST00000466624 IL17DQ8TAD2 202 aa11.46□□□□□ -0.57
GPC1-207ENST00000466624 WWC2-AS2Q96NR7 200 aa11.46□□□□□ -0.57
GPC1-207ENST00000466624 NAGKQ9UJ70 344 aa11.46□□□□□ -0.57
GPC1-207ENST00000466624 TIMM8BQ9Y5J9 83 aaPredicted RBP11.46□□□□□ -0.57
GPC1-207ENST00000466624 SNURFLB1AK76 121 aa11.45□□□□□ -0.58
GPC1-207ENST00000466624 C9JQL5 133 aa11.45□□□□□ -0.58
GPC1-207ENST00000466624 TYMSP04818 313 aa11.45□□□□□ -0.58
GPC1-207ENST00000466624 SPART-AS1P0CW21 52 aa11.45□□□□□ -0.58
GPC1-207ENST00000466624 CEBPGP53567 150 aa11.45□□□□□ -0.58
GPC1-207ENST00000466624 TCL1AP56279 114 aa11.45□□□□□ -0.58
GPC1-207ENST00000466624 ZNF415Q09FC8 603 aa11.45□□□□□ -0.58
GPC1-207ENST00000466624 DAZ2Q13117 558 aaKnown RBP11.45□□□□□ -0.58
GPC1-207ENST00000466624 LINC01559Q495D7 138 aa11.45□□□□□ -0.58
GPC1-207ENST00000466624 SMIM7Q9BQ49 75 aa11.45□□□□□ -0.58
GPC1-207ENST00000466624 DKK2Q9UBU2 259 aa11.45□□□□□ -0.58
GPC1-207ENST00000466624 IGKV3D-20A0A0C4DH25 116 aa11.44□□□□□ -0.58
GPC1-207ENST00000466624 CXorf65A6NEN9 183 aa11.44□□□□□ -0.58
GPC1-207ENST00000466624 ZNF727A8MUV8 499 aa11.44□□□□□ -0.58
GPC1-207ENST00000466624 MGST1P10620 155 aaKnown RBP11.44□□□□□ -0.58
GPC1-207ENST00000466624 EMP1P54849 157 aa11.44□□□□□ -0.58
GPC1-207ENST00000466624 C11orf45Q8TAV5 145 aa11.44□□□□□ -0.58
GPC1-207ENST00000466624 IGHV3-16A0A0C4DH30 117 aa11.43□□□□□ -0.58
GPC1-207ENST00000466624 PGPEP1LA6NFU8 196 aa11.43□□□□□ -0.58
GPC1-207ENST00000466624 ORM1P02763 201 aa11.43□□□□□ -0.58
GPC1-207ENST00000466624 DNLZQ5SXM8 178 aa11.43□□□□□ -0.58
GPC1-207ENST00000466624 FAM222AQ5U5X8 452 aa11.43□□□□□ -0.58
GPC1-207ENST00000466624 PRR27Q6MZM9 219 aa11.43□□□□□ -0.58
GPC1-207ENST00000466624 UQCC3Q6UW78 93 aa11.43□□□□□ -0.58
GPC1-207ENST00000466624 OCC1Q8TAD7 63 aa11.43□□□□□ -0.58
GPC1-207ENST00000466624 GSN-AS1Q9NRJ2 163 aa11.43□□□□□ -0.58
GPC1-207ENST00000466624 CELA1Q9UNI1 258 aa11.43□□□□□ -0.58
GPC1-207ENST00000466624 LINC00862A6NCI5 91 aa11.42□□□□□ -0.58
GPC1-207ENST00000466624 C19orf71A6NCJ1 209 aa11.42□□□□□ -0.58
GPC1-207ENST00000466624 B4DEV8 164 aa11.42□□□□□ -0.58
GPC1-207ENST00000466624 KRBOX1C9JBD0 128 aa11.42□□□□□ -0.58
GPC1-207ENST00000466624 GNRH2O43555 120 aa11.42□□□□□ -0.58
GPC1-207ENST00000466624 CXCL1P09341 107 aa11.42□□□□□ -0.58
GPC1-207ENST00000466624 SPXQ9BT56 116 aa11.42□□□□□ -0.58
GPC1-207ENST00000466624 NOP10Q9NPE3 64 aaKnown RBP11.42□□□□□ -0.58
GPC1-207ENST00000466624 MDFICQ9P1T7 246 aa11.42□□□□□ -0.58
GPC1-207ENST00000466624 DNAH7Q8WXX0 4024 aa11.42□□□□□ -0.58
GPC1-207ENST00000466624 K7EN84 100 aa11.41□□□□□ -0.58
GPC1-207ENST00000466624 SOHLH1Q5JUK2 328 aa11.41□□□□□ -0.58
GPC1-207ENST00000466624 LINC00612Q8N6U2 182 aa11.41□□□□□ -0.58
GPC1-207ENST00000466624 DAZAP1Q96EP5 407 aaKnown RBP11.41□□□□□ -0.58
GPC1-207ENST00000466624 M0R036 132 aa11.4□□□□□ -0.58
GPC1-207ENST00000466624 SPINK4O60575 86 aa11.4□□□□□ -0.58
GPC1-207ENST00000466624 ASIPP42127 132 aa11.4□□□□□ -0.58
GPC1-207ENST00000466624 TMEM241Q24JQ0 296 aa11.4□□□□□ -0.58
GPC1-207ENST00000466624 LGALS9BQ3B8N2 356 aa11.4□□□□□ -0.58
GPC1-207ENST00000466624 LINC01551Q86U37 167 aa11.4□□□□□ -0.58
GPC1-207ENST00000466624 NAT8Q9UHE5 227 aa11.4□□□□□ -0.58
GPC1-207ENST00000466624 SFTA3P0C7M3 94 aa11.39□□□□□ -0.59
GPC1-207ENST00000466624 OR5I1Q13606 314 aa11.39□□□□□ -0.59
GPC1-207ENST00000466624 C12orf74Q32Q52 190 aa11.39□□□□□ -0.59
GPC1-207ENST00000466624 FAM231DQ6ZW35 169 aa11.39□□□□□ -0.59
GPC1-207ENST00000466624 ZNF575Q86XF7 245 aa11.39□□□□□ -0.59
GPC1-207ENST00000466624 C9orf85Q96MD7 179 aa11.39□□□□□ -0.59
GPC1-207ENST00000466624 IL36BQ9NZH7 164 aa11.39□□□□□ -0.59
GPC1-207ENST00000466624 P01737 135 aa11.38□□□□□ -0.59
GPC1-207ENST00000466624 RNASE3P12724 160 aaKnown RBP11.38□□□□□ -0.59
GPC1-207ENST00000466624 S100A4P26447 101 aaKnown RBP11.38□□□□□ -0.59
GPC1-207ENST00000466624 NANOS2P60321 138 aaKnown RBP11.38□□□□□ -0.59
GPC1-207ENST00000466624 RPS20P60866 119 aaKnown RBP11.38□□□□□ -0.59
GPC1-207ENST00000466624 DAD1P61803 113 aa11.38□□□□□ -0.59
GPC1-207ENST00000466624 COMMD7Q86VX2 200 aa11.38□□□□□ -0.59
GPC1-207ENST00000466624 NUDT10Q8NFP7 164 aa11.38□□□□□ -0.59
GPC1-207ENST00000466624 MUC7Q8TAX7 377 aa11.38□□□□□ -0.59
GPC1-207ENST00000466624 PTH2Q96A98 100 aa11.38□□□□□ -0.59
GPC1-207ENST00000466624 NUDT11Q96G61 164 aa11.38□□□□□ -0.59
GPC1-207ENST00000466624 C18orf15Q96N68 181 aa11.38□□□□□ -0.59
GPC1-207ENST00000466624 NDUFAF3Q9BU61 184 aa11.38□□□□□ -0.59
GPC1-207ENST00000466624 M0R2P5 195 aa11.37□□□□□ -0.59
GPC1-207ENST00000466624 MED14OSP0DP75 135 aa11.37□□□□□ -0.59
GPC1-207ENST00000466624 RASL10AQ92737 203 aa11.37□□□□□ -0.59
GPC1-207ENST00000466624 MUC4Q99102 2169 aa11.37□□□□□ -0.59
GPC1-207ENST00000466624 TMSB15BA0A087X1C1 80 aa11.36□□□□□ -0.59
GPC1-207ENST00000466624 XKRY2A2RUG3 117 aa11.36□□□□□ -0.59
GPC1-207ENST00000466624 RPL23P62829 140 aaKnown RBP11.36□□□□□ -0.59
GPC1-207ENST00000466624 RPL19P84098 196 aaKnown RBP11.36□□□□□ -0.59
GPC1-207ENST00000466624 PIK3CD-AS1Q5SR53 167 aa11.36□□□□□ -0.59
GPC1-207ENST00000466624 Q6ZTC4 211 aa11.36□□□□□ -0.59
GPC1-207ENST00000466624 Q6ZTI0 123 aa11.36□□□□□ -0.59
GPC1-207ENST00000466624 OR2D3Q8NGH3 330 aa11.36□□□□□ -0.59
GPC1-207ENST00000466624 TRGV1A0A0A0MS02 117 aa11.35□□□□□ -0.59
GPC1-207ENST00000466624 GRIFINA4D1Z8 144 aa11.35□□□□□ -0.59
GPC1-207ENST00000466624 DEFB130BP0DP73 79 aa11.35□□□□□ -0.59
GPC1-207ENST00000466624 DEFB130AP0DP74 79 aa11.35□□□□□ -0.59
GPC1-207ENST00000466624 ISOC2Q96AB3 205 aa11.35□□□□□ -0.59
GPC1-207ENST00000466624 RNASE7Q9H1E1 156 aaKnown RBP11.35□□□□□ -0.59
GPC1-207ENST00000466624 RPP21Q9H633 154 aaKnown RBP11.35□□□□□ -0.59
GPC1-207ENST00000466624 SCRT2Q9NQ03 307 aa11.35□□□□□ -0.59
GPC1-207ENST00000466624 OSTCQ9NRP0 149 aa11.35□□□□□ -0.59
GPC1-207ENST00000466624 TRAV10A0A0B4J240 114 aa11.34□□□□□ -0.59
GPC1-207ENST00000466624 GAGE12BA1L429 117 aa11.34□□□□□ -0.59
GPC1-207ENST00000466624 TMEM218A2RU14 115 aa11.34□□□□□ -0.59
GPC1-207ENST00000466624 C3orf84H3BNL1 204 aa11.34□□□□□ -0.59
GPC1-207ENST00000466624 H3BVH4 76 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms