RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 PFN1P07737 140 aaKnown RBP6.66□□□□□ -1.34
SDCCAG3-208ENST00000466579 CCL20P78556 96 aa6.66□□□□□ -1.34
SDCCAG3-208ENST00000466579 ZNF415Q09FC8 603 aa6.66□□□□□ -1.34
SDCCAG3-208ENST00000466579 TMEM183BQ1AE95 376 aa6.66□□□□□ -1.34
SDCCAG3-208ENST00000466579 SMUG1Q53HV7 270 aa6.66□□□□□ -1.34
SDCCAG3-208ENST00000466579 FAM159AQ6UWV7 190 aa6.66□□□□□ -1.34
SDCCAG3-208ENST00000466579 Q6ZTI0 123 aa6.66□□□□□ -1.34
SDCCAG3-208ENST00000466579 PRNTQ86SH4 94 aa6.66□□□□□ -1.34
SDCCAG3-208ENST00000466579 Q86TA4 180 aa6.66□□□□□ -1.34
SDCCAG3-208ENST00000466579 FMC1Q96HJ9 113 aa6.66□□□□□ -1.34
SDCCAG3-208ENST00000466579 SPXQ9BT56 116 aa6.66□□□□□ -1.34
SDCCAG3-208ENST00000466579 C11orf21Q9P2W6 132 aa6.66□□□□□ -1.34
SDCCAG3-208ENST00000466579 ZFP30Q9Y2G7 519 aa6.66□□□□□ -1.34
SDCCAG3-208ENST00000466579 MUC4Q99102 2169 aa6.66□□□□□ -1.34
SDCCAG3-208ENST00000466579 IGHV3-16A0A0C4DH30 117 aa6.65□□□□□ -1.34
SDCCAG3-208ENST00000466579 GAGE12BA1L429 117 aa6.65□□□□□ -1.34
SDCCAG3-208ENST00000466579 GAGE7O76087 117 aa6.65□□□□□ -1.34
SDCCAG3-208ENST00000466579 GCGP01275 180 aa6.65□□□□□ -1.34
SDCCAG3-208ENST00000466579 LTAP01374 205 aa6.65□□□□□ -1.34
SDCCAG3-208ENST00000466579 GAGE12FP0CL80 117 aa6.65□□□□□ -1.34
SDCCAG3-208ENST00000466579 GAGE12GP0CL81 117 aa6.65□□□□□ -1.34
SDCCAG3-208ENST00000466579 GAGE12IP0CL82 117 aa6.65□□□□□ -1.34
SDCCAG3-208ENST00000466579 MUC21Q5SSG8 566 aa6.65□□□□□ -1.34
SDCCAG3-208ENST00000466579 CST9LP1Q5W188 147 aa6.65□□□□□ -1.34
SDCCAG3-208ENST00000466579 TMEM88Q6PEY1 159 aa6.65□□□□□ -1.34
SDCCAG3-208ENST00000466579 C15orf53Q8NAA6 179 aa6.65□□□□□ -1.34
SDCCAG3-208ENST00000466579 RASL10AQ92737 203 aa6.65□□□□□ -1.34
SDCCAG3-208ENST00000466579 C11orf52Q96A22 123 aa6.65□□□□□ -1.34
SDCCAG3-208ENST00000466579 KCNS1Q96KK3 526 aa6.65□□□□□ -1.34
SDCCAG3-208ENST00000466579 TXNDC17Q9BRA2 123 aa6.65□□□□□ -1.34
SDCCAG3-208ENST00000466579 MANBALQ9NQG1 85 aa6.65□□□□□ -1.34
SDCCAG3-208ENST00000466579 MDFICQ9P1T7 246 aa6.65□□□□□ -1.34
SDCCAG3-208ENST00000466579 H3BNG1 76 aa6.64□□□□□ -1.35
SDCCAG3-208ENST00000466579 TEX46H3BTG2 121 aa6.64□□□□□ -1.35
SDCCAG3-208ENST00000466579 LY6G6CO95867 125 aa6.64□□□□□ -1.35
SDCCAG3-208ENST00000466579 TYMSP04818 313 aa6.64□□□□□ -1.35
SDCCAG3-208ENST00000466579 S100A9P06702 114 aaKnown RBP6.64□□□□□ -1.35
SDCCAG3-208ENST00000466579 HTN3P15516 51 aa6.64□□□□□ -1.35
SDCCAG3-208ENST00000466579 HOXA5P20719 270 aa6.64□□□□□ -1.35
SDCCAG3-208ENST00000466579 TMEM183AQ8IXX5 376 aa6.64□□□□□ -1.35
SDCCAG3-208ENST00000466579 SDF2L1Q9HCN8 221 aa6.64□□□□□ -1.35
SDCCAG3-208ENST00000466579 TRGV1A0A0A0MS02 117 aa6.63□□□□□ -1.35
SDCCAG3-208ENST00000466579 A0A1B0GV50 99 aa6.63□□□□□ -1.35
SDCCAG3-208ENST00000466579 SCO2A0A1W2PP80 73 aa6.63□□□□□ -1.35
SDCCAG3-208ENST00000466579 FABP5P3A8MUU1 101 aa6.63□□□□□ -1.35
SDCCAG3-208ENST00000466579 F5H768 121 aa6.63□□□□□ -1.35
SDCCAG3-208ENST00000466579 GNRH2O43555 120 aa6.63□□□□□ -1.35
SDCCAG3-208ENST00000466579 P0DMU3 169 aa6.63□□□□□ -1.35
SDCCAG3-208ENST00000466579 FAM231AP0DMU4 169 aa6.63□□□□□ -1.35
SDCCAG3-208ENST00000466579 FAM231CP0DMU5 169 aa6.63□□□□□ -1.35
SDCCAG3-208ENST00000466579 AKR1C3P42330 323 aa6.63□□□□□ -1.35
SDCCAG3-208ENST00000466579 CRIP1P50238 77 aa6.63□□□□□ -1.35
SDCCAG3-208ENST00000466579 ZNF674Q2M3X9 581 aa6.63□□□□□ -1.35
SDCCAG3-208ENST00000466579 LYPD6BQ8NI32 183 aa6.63□□□□□ -1.35
SDCCAG3-208ENST00000466579 PTH2Q96A98 100 aa6.63□□□□□ -1.35
SDCCAG3-208ENST00000466579 ZC2HC1AQ96GY0 325 aa6.63□□□□□ -1.35
SDCCAG3-208ENST00000466579 C9orf85Q96MD7 179 aa6.63□□□□□ -1.35
SDCCAG3-208ENST00000466579 MLST8Q9BVC4 326 aa6.63□□□□□ -1.35
SDCCAG3-208ENST00000466579 TRGV2A0A075B6R0 118 aa6.62□□□□□ -1.35
SDCCAG3-208ENST00000466579 IGKV3D-20A0A0C4DH25 116 aa6.62□□□□□ -1.35
SDCCAG3-208ENST00000466579 M0R2P5 195 aa6.62□□□□□ -1.35
SDCCAG3-208ENST00000466579 NKX2-5P52952 324 aaPredicted RBP6.62□□□□□ -1.35
SDCCAG3-208ENST00000466579 UBE2G1P62253 170 aa6.62□□□□□ -1.35
SDCCAG3-208ENST00000466579 RNF212Q495C1 297 aa6.62□□□□□ -1.35
SDCCAG3-208ENST00000466579 DNLZQ5SXM8 178 aa6.62□□□□□ -1.35
SDCCAG3-208ENST00000466579 ZNF575Q86XF7 245 aa6.62□□□□□ -1.35
SDCCAG3-208ENST00000466579 MRPL16Q9NX20 251 aaKnown RBP6.62□□□□□ -1.35
SDCCAG3-208ENST00000466579 GNG13Q9P2W3 67 aa6.62□□□□□ -1.35
SDCCAG3-208ENST00000466579 NAGKQ9UJ70 344 aa6.62□□□□□ -1.35
SDCCAG3-208ENST00000466579 DNAH10Q8IVF4 4471 aa6.61□□□□□ -1.35
SDCCAG3-208ENST00000466579 NACAE9PAV3 2078 aa6.61□□□□□ -1.35
SDCCAG3-208ENST00000466579 BCL2P10415 239 aa6.61□□□□□ -1.35
SDCCAG3-208ENST00000466579 RNASE3P12724 160 aaKnown RBP6.61□□□□□ -1.35
SDCCAG3-208ENST00000466579 TAGLN2P37802 199 aaKnown RBP6.61□□□□□ -1.35
SDCCAG3-208ENST00000466579 BLOC1S1P78537 153 aa6.61□□□□□ -1.35
SDCCAG3-208ENST00000466579 PIK3CD-AS1Q5SR53 167 aa6.61□□□□□ -1.35
SDCCAG3-208ENST00000466579 FAM162BQ5T6X4 162 aa6.61□□□□□ -1.35
SDCCAG3-208ENST00000466579 ALKAL2Q6UX46 152 aa6.61□□□□□ -1.35
SDCCAG3-208ENST00000466579 POM121L12Q8N7R1 296 aa6.61□□□□□ -1.35
SDCCAG3-208ENST00000466579 VSIG2Q96IQ7 327 aa6.61□□□□□ -1.35
SDCCAG3-208ENST00000466579 FRAS1Q86XX4 4008 aa6.61□□□□□ -1.35
SDCCAG3-208ENST00000466579 TRAV26-1A0A087WT03 109 aa6.6□□□□□ -1.35
SDCCAG3-208ENST00000466579 TRAV4A0A0B4J268 109 aa6.6□□□□□ -1.35
SDCCAG3-208ENST00000466579 KRBOX1C9JBD0 128 aa6.6□□□□□ -1.35
SDCCAG3-208ENST00000466579 PDE6DO43924 150 aa6.6□□□□□ -1.35
SDCCAG3-208ENST00000466579 SH2D1AO60880 128 aa6.6□□□□□ -1.35
SDCCAG3-208ENST00000466579 IFNA1P01562 189 aa6.6□□□□□ -1.35
SDCCAG3-208ENST00000466579 FAM3BP58499 235 aaPredicted RBP6.6□□□□□ -1.35
SDCCAG3-208ENST00000466579 MEF2BQ02080 365 aaPredicted RBP6.6□□□□□ -1.35
SDCCAG3-208ENST00000466579 SLAQ13239 276 aa6.6□□□□□ -1.35
SDCCAG3-208ENST00000466579 FHL2Q14192 279 aa6.6□□□□□ -1.35
SDCCAG3-208ENST00000466579 LINC01559Q495D7 138 aa6.6□□□□□ -1.35
SDCCAG3-208ENST00000466579 VAX2Q9UIW0 290 aa6.6□□□□□ -1.35
SDCCAG3-208ENST00000466579 NDUFS6O75380 124 aaKnown RBP6.59□□□□□ -1.35
SDCCAG3-208ENST00000466579 CXCL1P09341 107 aa6.59□□□□□ -1.35
SDCCAG3-208ENST00000466579 RPL35P42766 123 aaKnown RBP6.59□□□□□ -1.35
SDCCAG3-208ENST00000466579 OR5I1Q13606 314 aa6.59□□□□□ -1.35
SDCCAG3-208ENST00000466579 BAGE2Q86Y30 109 aa6.59□□□□□ -1.35
SDCCAG3-208ENST00000466579 SMIM12Q96EX1 92 aa6.59□□□□□ -1.35
SDCCAG3-208ENST00000466579 SCRT2Q9NQ03 307 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms