RNA–Protein interactions for RNA: ENST00000464025.5

LMO2-204, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,550 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-204ENST00000464025 TNFRSF6BO95407 300 aa13.15□□□□□ -0.3
LMO2-204ENST00000464025 HBDP02042 147 aa13.15□□□□□ -0.3
LMO2-204ENST00000464025 IGLL1P15814 213 aa13.15□□□□□ -0.3
LMO2-204ENST00000464025 ATOH7Q8N100 152 aa13.15□□□□□ -0.3
LMO2-204ENST00000464025 SCRT2Q9NQ03 307 aa13.15□□□□□ -0.3
LMO2-204ENST00000464025 POLQO75417 2590 aa13.14□□□□□ -0.31
LMO2-204ENST00000464025 SMKR1H3BMG3 65 aa13.14□□□□□ -0.31
LMO2-204ENST00000464025 EDN2P20800 178 aa13.14□□□□□ -0.31
LMO2-204ENST00000464025 Q6ZQT7 251 aa13.14□□□□□ -0.31
LMO2-204ENST00000464025 MS4A6AQ9H2W1 248 aa13.14□□□□□ -0.31
LMO2-204ENST00000464025 F6UB75 175 aa13.13□□□□□ -0.31
LMO2-204ENST00000464025 NCR2O95944 276 aa13.13□□□□□ -0.31
LMO2-204ENST00000464025 EVI2AP22794 236 aa13.13□□□□□ -0.31
LMO2-204ENST00000464025 MAJINQ3KP22 176 aa13.13□□□□□ -0.31
LMO2-204ENST00000464025 SPANXN1Q5VSR9 72 aa13.13□□□□□ -0.31
LMO2-204ENST00000464025 EPG5Q9HCE0 2579 aa13.13□□□□□ -0.31
LMO2-204ENST00000464025 CREBBPQ92793 2442 aa13.13□□□□□ -0.31
LMO2-204ENST00000464025 IGHV4OR15-8A0A075B7B6 117 aa13.12□□□□□ -0.31
LMO2-204ENST00000464025 A0A087WW49 117 aa13.12□□□□□ -0.31
LMO2-204ENST00000464025 H3BVH4 76 aa13.12□□□□□ -0.31
LMO2-204ENST00000464025 K7EQG2 157 aa13.12□□□□□ -0.31
LMO2-204ENST00000464025 ASIPP42127 132 aa13.12□□□□□ -0.31
LMO2-204ENST00000464025 DEFB1P60022 68 aa13.12□□□□□ -0.31
LMO2-204ENST00000464025 MRAP2Q96G30 205 aa13.12□□□□□ -0.31
LMO2-204ENST00000464025 MRPS16Q9Y3D3 137 aaKnown RBP13.12□□□□□ -0.31
LMO2-204ENST00000464025 IGKV3-7A0A075B6H7 116 aa13.11□□□□□ -0.31
LMO2-204ENST00000464025 A0A1B0GV90 55 aa13.11□□□□□ -0.31
LMO2-204ENST00000464025 HOXD3P31249 432 aaPredicted RBP13.11□□□□□ -0.31
LMO2-204ENST00000464025 RNASE4P34096 147 aaKnown RBP13.11□□□□□ -0.31
LMO2-204ENST00000464025 ANXA2RQ3ZCQ2 193 aa13.11□□□□□ -0.31
LMO2-204ENST00000464025 IGLV2-18A0A075B6J9 118 aa13.11□□□□□ -0.31
LMO2-204ENST00000464025 SRD5A1P18405 259 aa13.11□□□□□ -0.31
LMO2-204ENST00000464025 SNRPD3P62318 126 aaKnown RBP13.11□□□□□ -0.31
LMO2-204ENST00000464025 LGALS9BQ3B8N2 356 aa13.11□□□□□ -0.31
LMO2-204ENST00000464025 LGALS9CQ6DKI2 356 aa13.11□□□□□ -0.31
LMO2-204ENST00000464025 Q8N8P6 123 aa13.11□□□□□ -0.31
LMO2-204ENST00000464025 NRACQ8N912 160 aa13.11□□□□□ -0.31
LMO2-204ENST00000464025 OR2K2Q8NGT1 345 aa13.11□□□□□ -0.31
LMO2-204ENST00000464025 CSMD2Q7Z408 3487 aa13.1□□□□□ -0.31
LMO2-204ENST00000464025 SYNJ2BPP57105 145 aa13.1□□□□□ -0.31
LMO2-204ENST00000464025 Q6ZN92 141 aa13.1□□□□□ -0.31
LMO2-204ENST00000464025 DPF1Q92782 380 aa13.1□□□□□ -0.31
LMO2-204ENST00000464025 DOPEY2Q9Y3R5 2298 aa13.1□□□□□ -0.31
LMO2-204ENST00000464025 HSBP1L1C9JCN9 74 aa13.09□□□□□ -0.31
LMO2-204ENST00000464025 NXPH4O95158 308 aa13.09□□□□□ -0.31
LMO2-204ENST00000464025 GAS8-AS1O95177 125 aa13.09□□□□□ -0.31
LMO2-204ENST00000464025 FCER1GP30273 86 aa13.09□□□□□ -0.31
LMO2-204ENST00000464025 LEPP41159 167 aa13.09□□□□□ -0.31
LMO2-204ENST00000464025 HNRNPA3P51991 378 aaKnown RBP13.09□□□□□ -0.31
LMO2-204ENST00000464025 NUTF2P61970 127 aaKnown RBP13.09□□□□□ -0.31
LMO2-204ENST00000464025 A0A0J9YX75 114 aa13.08□□□□□ -0.32
LMO2-204ENST00000464025 J3KRW8 73 aa13.08□□□□□ -0.32
LMO2-204ENST00000464025 RNASE3P12724 160 aaKnown RBP13.08□□□□□ -0.32
LMO2-204ENST00000464025 S100A4P26447 101 aaKnown RBP13.08□□□□□ -0.32
LMO2-204ENST00000464025 TSPOP30536 169 aa13.08□□□□□ -0.32
LMO2-204ENST00000464025 WFDC3Q8IUB2 231 aa13.07□□□□□ -0.32
LMO2-204ENST00000464025 POM121L12Q8N7R1 296 aa13.07□□□□□ -0.32
LMO2-204ENST00000464025 WFDC12Q8WWY7 111 aa13.07□□□□□ -0.32
LMO2-204ENST00000464025 IFI27L1Q96BM0 104 aa13.07□□□□□ -0.32
LMO2-204ENST00000464025 ZMAT5Q9UDW3 170 aaKnown RBP13.07□□□□□ -0.32
LMO2-204ENST00000464025 PHLDA3Q9Y5J5 127 aa13.07□□□□□ -0.32
LMO2-204ENST00000464025 TRAV2A0A0B4J234 112 aa13.07□□□□□ -0.32
LMO2-204ENST00000464025 GATA1P15976 413 aaPredicted RBP13.07□□□□□ -0.32
LMO2-204ENST00000464025 KIR3DS1Q14943 382 aa13.07□□□□□ -0.32
LMO2-204ENST00000464025 DPH3P1Q9H4G8 78 aa13.07□□□□□ -0.32
LMO2-204ENST00000464025 ABCA12Q86UK0 2595 aa13.06□□□□□ -0.32
LMO2-204ENST00000464025 C7orf71A4D174 169 aa13.06□□□□□ -0.32
LMO2-204ENST00000464025 M0R381 172 aa13.06□□□□□ -0.32
LMO2-204ENST00000464025 DUSP14O95147 198 aaKnown RBP13.06□□□□□ -0.32
LMO2-204ENST00000464025 PSMG4Q5JS54 123 aa13.06□□□□□ -0.32
LMO2-204ENST00000464025 WFDC11Q8NEX6 87 aa13.06□□□□□ -0.32
LMO2-204ENST00000464025 C4orf3Q8WVX3 66 aa13.06□□□□□ -0.32
LMO2-204ENST00000464025 TIMM8BQ9Y5J9 83 aaPredicted RBP13.06□□□□□ -0.32
LMO2-204ENST00000464025 MAP1AP78559 2803 aaPredicted RBP13.05□□□□□ -0.32
LMO2-204ENST00000464025 hDV102S1A0JD36 115 aa13.05□□□□□ -0.32
LMO2-204ENST00000464025 LINC01619G3V211 115 aa13.05□□□□□ -0.32
LMO2-204ENST00000464025 GNRH2O43555 120 aa13.05□□□□□ -0.32
LMO2-204ENST00000464025 ZNF688P0C7X2 276 aa13.05□□□□□ -0.32
LMO2-204ENST00000464025 PLA2G2AP14555 144 aa13.05□□□□□ -0.32
LMO2-204ENST00000464025 C20orf78Q9BR46 151 aa13.05□□□□□ -0.32
LMO2-204ENST00000464025 K7EMI3 77 aa13.04□□□□□ -0.32
LMO2-204ENST00000464025 FAM159AQ6UWV7 190 aa13.04□□□□□ -0.32
LMO2-204ENST00000464025 ADAMTSL5Q6ZMM2 481 aa13.04□□□□□ -0.32
LMO2-204ENST00000464025 FOXI2Q6ZQN5 318 aa13.04□□□□□ -0.32
LMO2-204ENST00000464025 ZANQ9Y493 2812 aa13.04□□□□□ -0.32
LMO2-204ENST00000464025 J3QKU1 62 aa13.03□□□□□ -0.32
LMO2-204ENST00000464025 PPP1R17O96001 155 aa13.03□□□□□ -0.32
LMO2-204ENST00000464025 TCTEX1D4Q5JR98 221 aa13.03□□□□□ -0.32
LMO2-204ENST00000464025 AP1S3Q96PC3 154 aa13.03□□□□□ -0.32
LMO2-204ENST00000464025 PEMTQ9UBM1 199 aa13.03□□□□□ -0.32
LMO2-204ENST00000464025 GOLT1BQ9Y3E0 138 aa13.03□□□□□ -0.32
LMO2-204ENST00000464025 MUC4Q99102 2169 aa13.03□□□□□ -0.32
LMO2-204ENST00000464025 LAGE3Q14657 143 aa13.03□□□□□ -0.32
LMO2-204ENST00000464025 OR1N2Q8NGR9 330 aa13.03□□□□□ -0.32
LMO2-204ENST00000464025 SELENOKQ9Y6D0 94 aa13.03□□□□□ -0.32
LMO2-204ENST00000464025 H0Y8G0 127 aa13.02□□□□□ -0.33
LMO2-204ENST00000464025 TFPI2P48307 235 aa13.02□□□□□ -0.33
LMO2-204ENST00000464025 COL5A1-AS1Q5SY13 56 aa13.02□□□□□ -0.33
LMO2-204ENST00000464025 SLC25A34Q6PIV7 304 aa13.02□□□□□ -0.33
LMO2-204ENST00000464025 PMCHL2Q9BQD1 86 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms