RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 KCNIP2Q9NS61 270 aa13.8□□□□□ -0.2
CPSF7-209ENST00000463244 PFN1P07737 140 aaKnown RBP13.79□□□□□ -0.2
CPSF7-209ENST00000463244 OR10J3Q5JRS4 329 aa13.79□□□□□ -0.2
CPSF7-209ENST00000463244 Q6ZSA8 131 aa13.79□□□□□ -0.2
CPSF7-209ENST00000463244 UBE2L3P68036 154 aaKnown RBP13.78□□□□□ -0.2
CPSF7-209ENST00000463244 WDR61Q9GZS3 305 aaKnown RBP13.78□□□□□ -0.2
CPSF7-209ENST00000463244 IGHV3-30P01768 117 aa13.77□□□□□ -0.21
CPSF7-209ENST00000463244 IGHV3-33P01772 117 aa13.77□□□□□ -0.21
CPSF7-209ENST00000463244 TYMSP04818 313 aa13.77□□□□□ -0.21
CPSF7-209ENST00000463244 IGHV3-30-3P0DP02 117 aa13.77□□□□□ -0.21
CPSF7-209ENST00000463244 IGHV3-30-5P0DP03 117 aa13.77□□□□□ -0.21
CPSF7-209ENST00000463244 UBR4Q5T4S7 5183 aa13.77□□□□□ -0.21
CPSF7-209ENST00000463244 LINC00528Q8N1L1 170 aa13.77□□□□□ -0.21
CPSF7-209ENST00000463244 SLC25A29Q8N8R3 303 aa13.77□□□□□ -0.21
CPSF7-209ENST00000463244 FBLL1A6NHQ2 334 aaKnown RBP13.76□□□□□ -0.21
CPSF7-209ENST00000463244 H2AFB2P0C5Z0 115 aa13.76□□□□□ -0.21
CPSF7-209ENST00000463244 WFDC2Q14508 124 aa13.76□□□□□ -0.21
CPSF7-209ENST00000463244 LAGE3Q14657 143 aa13.76□□□□□ -0.21
CPSF7-209ENST00000463244 DEFB104AQ8WTQ1 72 aa13.76□□□□□ -0.21
CPSF7-209ENST00000463244 TRAV21A0A0B4J279 112 aa13.75□□□□□ -0.21
CPSF7-209ENST00000463244 LELP1Q5T871 98 aa13.75□□□□□ -0.21
CPSF7-209ENST00000463244 HYLS1Q96M11 299 aa13.75□□□□□ -0.21
CPSF7-209ENST00000463244 C17orf112F2Z3M2 114 aa13.74□□□□□ -0.21
CPSF7-209ENST00000463244 RHOHQ15669 191 aa13.74□□□□□ -0.21
CPSF7-209ENST00000463244 PRADC1Q9BSG0 188 aa13.74□□□□□ -0.21
CPSF7-209ENST00000463244 TM2D2Q9BX73 214 aa13.74□□□□□ -0.21
CPSF7-209ENST00000463244 SDF2L1Q9HCN8 221 aa13.74□□□□□ -0.21
CPSF7-209ENST00000463244 OTORQ9NRC9 128 aa13.74□□□□□ -0.21
CPSF7-209ENST00000463244 TRBV6-4A0A1B0GX49 114 aa13.73□□□□□ -0.21
CPSF7-209ENST00000463244 KHDC3LQ587J8 217 aa13.73□□□□□ -0.21
CPSF7-209ENST00000463244 CFAP126Q5VTH2 177 aa13.73□□□□□ -0.21
CPSF7-209ENST00000463244 KCNS1Q96KK3 526 aa13.73□□□□□ -0.21
CPSF7-209ENST00000463244 OR5AC2Q9NZP5 309 aa13.73□□□□□ -0.21
CPSF7-209ENST00000463244 F6UZH7 168 aa13.72□□□□□ -0.21
CPSF7-209ENST00000463244 CIDEAO60543 219 aa13.72□□□□□ -0.21
CPSF7-209ENST00000463244 ASB13Q8WXK3 278 aa13.72□□□□□ -0.21
CPSF7-209ENST00000463244 TVP23CQ96ET8 276 aa13.72□□□□□ -0.21
CPSF7-209ENST00000463244 ATP5SQ99766 215 aa13.72□□□□□ -0.21
CPSF7-209ENST00000463244 GTSF1LQ9H1H1 148 aa13.72□□□□□ -0.21
CPSF7-209ENST00000463244 RPH3ALQ9UNE2 315 aa13.72□□□□□ -0.21
CPSF7-209ENST00000463244 PGPA6NDG6 321 aa13.71□□□□□ -0.21
CPSF7-209ENST00000463244 RS1O15537 224 aa13.71□□□□□ -0.21
CPSF7-209ENST00000463244 TAS2R45P59539 299 aa13.71□□□□□ -0.21
CPSF7-209ENST00000463244 ZNF876PQ49A33 203 aa13.71□□□□□ -0.21
CPSF7-209ENST00000463244 FFAR4Q5NUL3 377 aa13.71□□□□□ -0.21
CPSF7-209ENST00000463244 DPPA3Q6W0C5 159 aa13.71□□□□□ -0.21
CPSF7-209ENST00000463244 CMTM2Q8TAZ6 248 aa13.71□□□□□ -0.21
CPSF7-209ENST00000463244 TREM1Q9NP99 234 aa13.71□□□□□ -0.21
CPSF7-209ENST00000463244 TRAV8-1A0A0A6YYK1 113 aa13.7□□□□□ -0.22
CPSF7-209ENST00000463244 H0YIZ8 118 aa13.7□□□□□ -0.22
CPSF7-209ENST00000463244 GOLT1AQ6ZVE7 132 aa13.7□□□□□ -0.22
CPSF7-209ENST00000463244 Q8N3U1 123 aa13.7□□□□□ -0.22
CPSF7-209ENST00000463244 NMES1Q9C002 83 aa13.7□□□□□ -0.22
CPSF7-209ENST00000463244 IGHV3-73A0A0B4J1V6 119 aa13.69□□□□□ -0.22
CPSF7-209ENST00000463244 FAM240BA0A1B0GVZ2 78 aa13.69□□□□□ -0.22
CPSF7-209ENST00000463244 LECT2O14960 151 aa13.69□□□□□ -0.22
CPSF7-209ENST00000463244 SIX6O95475 246 aa13.69□□□□□ -0.22
CPSF7-209ENST00000463244 LRRC37A5PQ49AS3 106 aa13.69□□□□□ -0.22
CPSF7-209ENST00000463244 FAM74A1Q5RGS3 127 aa13.69□□□□□ -0.22
CPSF7-209ENST00000463244 SERTAD4-AS1Q5TG53 156 aa13.69□□□□□ -0.22
CPSF7-209ENST00000463244 ARL6IP6Q8N6S5 226 aa13.69□□□□□ -0.22
CPSF7-209ENST00000463244 ATP6V0E2Q8NHE4 81 aa13.69□□□□□ -0.22
CPSF7-209ENST00000463244 MBD2Q9UBB5 411 aa13.69□□□□□ -0.22
CPSF7-209ENST00000463244 EIF3GO75821 320 aaKnown RBP eCLIP13.68□□□□□ -0.22
CPSF7-209ENST00000463244 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.67□□□□□ -0.22
CPSF7-209ENST00000463244 TRAV8-3A0A0A6YYJ7 113 aa13.67□□□□□ -0.22
CPSF7-209ENST00000463244 SCXQ7RTU7 201 aa13.67□□□□□ -0.22
CPSF7-209ENST00000463244 MGST1P10620 155 aaKnown RBP13.66□□□□□ -0.22
CPSF7-209ENST00000463244 SYT8Q8NBV8 401 aa13.66□□□□□ -0.22
CPSF7-209ENST00000463244 C9orf85Q96MD7 179 aa13.66□□□□□ -0.22
CPSF7-209ENST00000463244 CCDC32Q9BV29 185 aa13.66□□□□□ -0.22
CPSF7-209ENST00000463244 C11orf21Q9P2W6 132 aa13.66□□□□□ -0.22
CPSF7-209ENST00000463244 KRTAP10-4P60372 401 aaPredicted RBP13.65□□□□□ -0.22
CPSF7-209ENST00000463244 GNG5P63218 68 aa13.65□□□□□ -0.22
CPSF7-209ENST00000463244 LINC01620Q4KN68 170 aa13.65□□□□□ -0.22
CPSF7-209ENST00000463244 PKHD1L1Q86WI1 4243 aa13.64□□□□□ -0.23
CPSF7-209ENST00000463244 ZNF506Q5JVG8 444 aa13.64□□□□□ -0.23
CPSF7-209ENST00000463244 PQLC2Q6ZP29 291 aa13.64□□□□□ -0.23
CPSF7-209ENST00000463244 DAZ4Q86SG3 579 aaKnown RBP13.64□□□□□ -0.23
CPSF7-209ENST00000463244 PTH2Q96A98 100 aa13.64□□□□□ -0.23
CPSF7-209ENST00000463244 DAZ3Q9NR90 486 aaKnown RBP13.64□□□□□ -0.23
CPSF7-209ENST00000463244 PGPEP1LA6NFU8 196 aa13.63□□□□□ -0.23
CPSF7-209ENST00000463244 LINC00694P0DN24 101 aa13.63□□□□□ -0.23
CPSF7-209ENST00000463244 ZNF80P51504 273 aaPredicted RBP13.63□□□□□ -0.23
CPSF7-209ENST00000463244 TOR2AQ5JU69 321 aa13.63□□□□□ -0.23
CPSF7-209ENST00000463244 BAALCQ8WXS3 180 aa13.63□□□□□ -0.23
CPSF7-209ENST00000463244 SGK494Q96LW2 274 aa13.63□□□□□ -0.23
CPSF7-209ENST00000463244 SH3BGRL3Q9H299 93 aa13.63□□□□□ -0.23
CPSF7-209ENST00000463244 HSPB11Q9Y547 144 aa13.63□□□□□ -0.23
CPSF7-209ENST00000463244 CYCSP99999 105 aaKnown RBP13.62□□□□□ -0.23
CPSF7-209ENST00000463244 MZT2BQ6NZ67 158 aa13.62□□□□□ -0.23
CPSF7-209ENST00000463244 SCGB1C1Q8TD33 95 aa13.62□□□□□ -0.23
CPSF7-209ENST00000463244 NDFIP1Q9BT67 221 aa13.62□□□□□ -0.23
CPSF7-209ENST00000463244 COX11Q9Y6N1 276 aa13.62□□□□□ -0.23
CPSF7-209ENST00000463244 TAAR5O14804 337 aa13.61□□□□□ -0.23
CPSF7-209ENST00000463244 OXTP01178 125 aa13.61□□□□□ -0.23
CPSF7-209ENST00000463244 ASAH1Q13510 395 aa13.61□□□□□ -0.23
CPSF7-209ENST00000463244 TMEM75Q8N9X5 138 aa13.61□□□□□ -0.23
CPSF7-209ENST00000463244 PPP1R1CQ8WVI7 109 aa13.61□□□□□ -0.23
CPSF7-209ENST00000463244 CHAC1Q9BUX1 264 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms