RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 FABP5P3A8MUU1 101 aa8.96□□□□□ -0.98
HDAC4-207ENST00000461113 IGLV2-11P01706 119 aa8.96□□□□□ -0.98
HDAC4-207ENST00000461113 PFN1P07737 140 aaKnown RBP8.96□□□□□ -0.98
HDAC4-207ENST00000461113 AZU1P20160 251 aa8.96□□□□□ -0.98
HDAC4-207ENST00000461113 ZNF415Q09FC8 603 aa8.96□□□□□ -0.98
HDAC4-207ENST00000461113 MUC21Q5SSG8 566 aa8.96□□□□□ -0.98
HDAC4-207ENST00000461113 PRR9Q5T870 116 aa8.96□□□□□ -0.98
HDAC4-207ENST00000461113 DMRTA1Q5VZB9 504 aa8.96□□□□□ -0.98
HDAC4-207ENST00000461113 LINC00336Q6ZUF6 198 aa8.96□□□□□ -0.98
HDAC4-207ENST00000461113 BAGE2Q86Y30 109 aa8.96□□□□□ -0.98
HDAC4-207ENST00000461113 TVP23CQ96ET8 276 aa8.96□□□□□ -0.98
HDAC4-207ENST00000461113 C8orf49Q96NF6 230 aa8.96□□□□□ -0.98
HDAC4-207ENST00000461113 EIF5A2Q9GZV4 153 aaKnown RBP8.96□□□□□ -0.98
HDAC4-207ENST00000461113 SDF2L1Q9HCN8 221 aa8.96□□□□□ -0.98
HDAC4-207ENST00000461113 MED9Q9NWA0 146 aa8.96□□□□□ -0.98
HDAC4-207ENST00000461113 DKK2Q9UBU2 259 aa8.96□□□□□ -0.98
HDAC4-207ENST00000461113 FAT2Q9NYQ8 4349 aa8.96□□□□□ -0.98
HDAC4-207ENST00000461113 DNAH11Q96DT5 4516 aa8.95□□□□□ -0.98
HDAC4-207ENST00000461113 TRAV10A0A0B4J240 114 aa8.95□□□□□ -0.98
HDAC4-207ENST00000461113 RBFOX3A6NFN3 312 aa8.95□□□□□ -0.98
HDAC4-207ENST00000461113 PRM2P04554 102 aa8.95□□□□□ -0.98
HDAC4-207ENST00000461113 IBA57Q5T440 356 aaKnown RBP8.95□□□□□ -0.98
HDAC4-207ENST00000461113 RNASE8Q8TDE3 154 aaKnown RBP8.95□□□□□ -0.98
HDAC4-207ENST00000461113 PHLDA1Q8WV24 401 aaPredicted RBP8.95□□□□□ -0.98
HDAC4-207ENST00000461113 NOP10Q9NPE3 64 aaKnown RBP8.95□□□□□ -0.98
HDAC4-207ENST00000461113 DNAH2Q9P225 4427 aa8.95□□□□□ -0.98
HDAC4-207ENST00000461113 LTAP01374 205 aa8.94□□□□□ -0.98
HDAC4-207ENST00000461113 DEFB130BP0DP73 79 aa8.94□□□□□ -0.98
HDAC4-207ENST00000461113 DEFB130AP0DP74 79 aa8.94□□□□□ -0.98
HDAC4-207ENST00000461113 FAM162BQ5T6X4 162 aa8.94□□□□□ -0.98
HDAC4-207ENST00000461113 TMEM183AQ8IXX5 376 aa8.94□□□□□ -0.98
HDAC4-207ENST00000461113 LYPD6BQ8NI32 183 aa8.94□□□□□ -0.98
HDAC4-207ENST00000461113 C2CD4CQ8TF44 421 aa8.94□□□□□ -0.98
HDAC4-207ENST00000461113 C11orf52Q96A22 123 aa8.94□□□□□ -0.98
HDAC4-207ENST00000461113 BIN3Q9NQY0 253 aa8.94□□□□□ -0.98
HDAC4-207ENST00000461113 ORM1P02763 201 aa8.93□□□□□ -0.98
HDAC4-207ENST00000461113 RPL35P42766 123 aaKnown RBP8.93□□□□□ -0.98
HDAC4-207ENST00000461113 DAZ2Q13117 558 aaKnown RBP8.93□□□□□ -0.98
HDAC4-207ENST00000461113 C12orf74Q32Q52 190 aa8.93□□□□□ -0.98
HDAC4-207ENST00000461113 GSN-AS1Q9NRJ2 163 aa8.93□□□□□ -0.98
HDAC4-207ENST00000461113 CELA1Q9UNI1 258 aa8.93□□□□□ -0.98
HDAC4-207ENST00000461113 DNAH6Q9C0G6 4158 aa8.93□□□□□ -0.98
HDAC4-207ENST00000461113 DEFB131BA0A096LNP1 70 aa8.92□□□□□ -0.98
HDAC4-207ENST00000461113 S100A4P26447 101 aaKnown RBP8.92□□□□□ -0.98
HDAC4-207ENST00000461113 GNG4P50150 75 aa8.92□□□□□ -0.98
HDAC4-207ENST00000461113 TCL1AP56279 114 aa8.92□□□□□ -0.98
HDAC4-207ENST00000461113 TDRG1Q3Y452 100 aa8.92□□□□□ -0.98
HDAC4-207ENST00000461113 TOR2AQ5JU69 321 aa8.92□□□□□ -0.98
HDAC4-207ENST00000461113 ZNF506Q5JVG8 444 aa8.92□□□□□ -0.98
HDAC4-207ENST00000461113 Q6ZTC4 211 aa8.92□□□□□ -0.98
HDAC4-207ENST00000461113 ZNF767PQ75MW2 155 aa8.92□□□□□ -0.98
HDAC4-207ENST00000461113 DAZAP1Q96EP5 407 aaKnown RBP8.92□□□□□ -0.98
HDAC4-207ENST00000461113 SPXQ9BT56 116 aa8.92□□□□□ -0.98
HDAC4-207ENST00000461113 TRGV2A0A075B6R0 118 aa8.91□□□□□ -0.98
HDAC4-207ENST00000461113 TRGV1A0A0A0MS02 117 aa8.91□□□□□ -0.98
HDAC4-207ENST00000461113 TMEM250H0YL14 139 aa8.91□□□□□ -0.98
HDAC4-207ENST00000461113 HTN3P15516 51 aa8.91□□□□□ -0.98
HDAC4-207ENST00000461113 ZNF80P51504 273 aaPredicted RBP8.91□□□□□ -0.98
HDAC4-207ENST00000461113 CEBPGP53567 150 aa8.91□□□□□ -0.98
HDAC4-207ENST00000461113 PEA15Q15121 130 aa8.91□□□□□ -0.98
HDAC4-207ENST00000461113 CENPWQ5EE01 88 aa8.91□□□□□ -0.98
HDAC4-207ENST00000461113 COX8CQ7Z4L0 72 aa8.91□□□□□ -0.98
HDAC4-207ENST00000461113 SMIM12Q96EX1 92 aa8.91□□□□□ -0.98
HDAC4-207ENST00000461113 ZC2HC1AQ96GY0 325 aa8.91□□□□□ -0.98
HDAC4-207ENST00000461113 FAM210AQ96ND0 272 aa8.91□□□□□ -0.98
HDAC4-207ENST00000461113 TP53TG3Q9ULZ0 132 aa8.91□□□□□ -0.98
HDAC4-207ENST00000461113 DNAH17Q9UFH2 4485 aa8.9□□□□□ -0.98
HDAC4-207ENST00000461113 GAGE12BA1L429 117 aa8.9□□□□□ -0.98
HDAC4-207ENST00000461113 PLAC8L1A1L4L8 177 aa8.9□□□□□ -0.98
HDAC4-207ENST00000461113 B4DEV8 164 aa8.9□□□□□ -0.98
HDAC4-207ENST00000461113 SH2D1AO60880 128 aa8.9□□□□□ -0.98
HDAC4-207ENST00000461113 NDUFS6O75380 124 aaKnown RBP8.9□□□□□ -0.98
HDAC4-207ENST00000461113 GAGE7O76087 117 aa8.9□□□□□ -0.98
HDAC4-207ENST00000461113 ATP5G1P05496 136 aa8.9□□□□□ -0.98
HDAC4-207ENST00000461113 GAGE12FP0CL80 117 aa8.9□□□□□ -0.98
HDAC4-207ENST00000461113 GAGE12GP0CL81 117 aa8.9□□□□□ -0.98
HDAC4-207ENST00000461113 GAGE12IP0CL82 117 aa8.9□□□□□ -0.98
HDAC4-207ENST00000461113 MGST1P10620 155 aaKnown RBP8.9□□□□□ -0.98
HDAC4-207ENST00000461113 OR5I1Q13606 314 aa8.9□□□□□ -0.98
HDAC4-207ENST00000461113 ZNF674Q2M3X9 581 aa8.9□□□□□ -0.98
HDAC4-207ENST00000461113 LGALS9BQ3B8N2 356 aa8.9□□□□□ -0.98
HDAC4-207ENST00000461113 Q6ZQT7 251 aa8.9□□□□□ -0.98
HDAC4-207ENST00000461113 NHLRC2Q8NBF2 726 aa8.9□□□□□ -0.98
HDAC4-207ENST00000461113 PRSS29PA6NIE9 313 aa8.89□□□□□ -0.99
HDAC4-207ENST00000461113 IGLL5B9A064 214 aa8.89□□□□□ -0.99
HDAC4-207ENST00000461113 GNRH2O43555 120 aa8.89□□□□□ -0.99
HDAC4-207ENST00000461113 TYMSP04818 313 aa8.89□□□□□ -0.99
HDAC4-207ENST00000461113 ASIPP42127 132 aa8.89□□□□□ -0.99
HDAC4-207ENST00000461113 TCTAP57738 103 aa8.89□□□□□ -0.99
HDAC4-207ENST00000461113 PRR27Q6MZM9 219 aa8.89□□□□□ -0.99
HDAC4-207ENST00000461113 C11orf72Q8NBR9 251 aa8.89□□□□□ -0.99
HDAC4-207ENST00000461113 HSPG2P98160 4391 aa8.89□□□□□ -0.99
HDAC4-207ENST00000461113 IGHV3-16A0A0C4DH30 117 aa8.88□□□□□ -0.99
HDAC4-207ENST00000461113 RAB19A4D1S5 217 aa8.88□□□□□ -0.99
HDAC4-207ENST00000461113 F5H768 121 aa8.88□□□□□ -0.99
HDAC4-207ENST00000461113 M0R036 132 aa8.88□□□□□ -0.99
HDAC4-207ENST00000461113 M0R2P5 195 aa8.88□□□□□ -0.99
HDAC4-207ENST00000461113 SPINK4O60575 86 aa8.88□□□□□ -0.99
HDAC4-207ENST00000461113 ZNF575Q86XF7 245 aa8.88□□□□□ -0.99
HDAC4-207ENST00000461113 PCNPQ8WW12 178 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms