RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 COX7A1P24310 79 aa11.96□□□□□ -0.5
SSR4-206ENST00000460616 ARL17AQ8IVW1 177 aa11.96□□□□□ -0.5
SSR4-206ENST00000460616 LINC01549A6NIU2 74 aa11.95□□□□□ -0.5
SSR4-206ENST00000460616 FHL3Q13643 280 aa11.95□□□□□ -0.5
SSR4-206ENST00000460616 TRAV12-1A0A0B4J245 112 aa11.95□□□□□ -0.5
SSR4-206ENST00000460616 TSPAN13O95857 204 aa11.95□□□□□ -0.5
SSR4-206ENST00000460616 LGALS1P09382 135 aaKnown RBP11.95□□□□□ -0.5
SSR4-206ENST00000460616 GRNP28799 593 aaKnown RBP11.95□□□□□ -0.5
SSR4-206ENST00000460616 ZNF672Q499Z4 452 aaPredicted RBP11.95□□□□□ -0.5
SSR4-206ENST00000460616 SFTA2Q6UW10 78 aa11.95□□□□□ -0.5
SSR4-206ENST00000460616 A6NJY4 79 aa11.94□□□□□ -0.5
SSR4-206ENST00000460616 ZFP2Q6ZN57 461 aa11.94□□□□□ -0.5
SSR4-206ENST00000460616 DYNAPQ8N1N2 210 aa11.94□□□□□ -0.5
SSR4-206ENST00000460616 CFHR4Q92496 578 aa11.94□□□□□ -0.5
SSR4-206ENST00000460616 TMEM78Q5T7P6 136 aa11.94□□□□□ -0.5
SSR4-206ENST00000460616 PTH2Q96A98 100 aa11.94□□□□□ -0.5
SSR4-206ENST00000460616 RNF183Q96D59 192 aa11.94□□□□□ -0.5
SSR4-206ENST00000460616 ERG28Q9UKR5 140 aa11.94□□□□□ -0.5
SSR4-206ENST00000460616 COL12A1Q99715 3063 aa11.94□□□□□ -0.5
SSR4-206ENST00000460616 MYO18BQ8IUG5 2567 aa11.93□□□□□ -0.5
SSR4-206ENST00000460616 MALRD1Q5VYJ5 2156 aa11.93□□□□□ -0.5
SSR4-206ENST00000460616 IGKV3D-20A0A0C4DH25 116 aa11.93□□□□□ -0.5
SSR4-206ENST00000460616 UFC1Q9Y3C8 167 aa11.93□□□□□ -0.5
SSR4-206ENST00000460616 F8W735 103 aaPredicted RBP11.93□□□□□ -0.5
SSR4-206ENST00000460616 IL17RELQ6ZVW7 336 aa11.93□□□□□ -0.5
SSR4-206ENST00000460616 PPDPFLQ8WWR9 84 aa11.93□□□□□ -0.5
SSR4-206ENST00000460616 FANCD2OSQ96PS1 177 aa11.93□□□□□ -0.5
SSR4-206ENST00000460616 PRAC2D3DTV9 90 aa11.92□□□□□ -0.5
SSR4-206ENST00000460616 TIMM23O14925 209 aa11.92□□□□□ -0.5
SSR4-206ENST00000460616 IGHV3-23P01764 117 aa11.92□□□□□ -0.5
SSR4-206ENST00000460616 SRSF9Q13242 221 aaKnown RBP eCLIP11.92□□□□□ -0.5
SSR4-206ENST00000460616 CARD19Q96LW7 228 aa11.92□□□□□ -0.5
SSR4-206ENST00000460616 SCGB3A1Q96QR1 104 aa11.92□□□□□ -0.5
SSR4-206ENST00000460616 C21orf62Q9NYP8 219 aa11.92□□□□□ -0.5
SSR4-206ENST00000460616 USP9XQ93008 2570 aaPredicted RBP11.92□□□□□ -0.5
SSR4-206ENST00000460616 IGLV11-55A0A075B6I3 123 aa11.92□□□□□ -0.5
SSR4-206ENST00000460616 BSPH1Q075Z2 132 aa11.92□□□□□ -0.5
SSR4-206ENST00000460616 KLK15Q9H2R5 256 aa11.92□□□□□ -0.5
SSR4-206ENST00000460616 NBR2O15453 112 aa11.91□□□□□ -0.5
SSR4-206ENST00000460616 SCGB1D4Q6XE38 83 aa11.91□□□□□ -0.5
SSR4-206ENST00000460616 TEN1Q86WV5 123 aa11.91□□□□□ -0.5
SSR4-206ENST00000460616 VCX2Q9H322 139 aa11.91□□□□□ -0.5
SSR4-206ENST00000460616 C11orf21Q9P2W6 132 aa11.91□□□□□ -0.5
SSR4-206ENST00000460616 GATA3P23771 443 aa11.91□□□□□ -0.5
SSR4-206ENST00000460616 UBE2D1P51668 147 aa11.91□□□□□ -0.5
SSR4-206ENST00000460616 PRADC1Q9BSG0 188 aa11.91□□□□□ -0.5
SSR4-206ENST00000460616 ZNF815PA8K554 130 aa11.9□□□□□ -0.5
SSR4-206ENST00000460616 LY6LH3BQJ8 138 aa11.9□□□□□ -0.5
SSR4-206ENST00000460616 NEXN-AS1Q8NBZ9 246 aa11.9□□□□□ -0.5
SSR4-206ENST00000460616 RNASE6Q93091 150 aaKnown RBP11.9□□□□□ -0.5
SSR4-206ENST00000460616 IGHV3OR16-8A0A075B7F1 116 aa11.89□□□□□ -0.51
SSR4-206ENST00000460616 UBE2D3P61077 147 aa11.89□□□□□ -0.51
SSR4-206ENST00000460616 UBE2D2P62837 147 aa11.89□□□□□ -0.51
SSR4-206ENST00000460616 ANAPC13Q9BS18 74 aa11.89□□□□□ -0.51
SSR4-206ENST00000460616 PRSS29PA6NIE9 313 aa11.89□□□□□ -0.51
SSR4-206ENST00000460616 LINC01548A6NM66 108 aa11.89□□□□□ -0.51
SSR4-206ENST00000460616 C5orf64Q2M2E5 130 aa11.89□□□□□ -0.51
SSR4-206ENST00000460616 SPANXN1Q5VSR9 72 aa11.89□□□□□ -0.51
SSR4-206ENST00000460616 OR11H6Q8NGC7 330 aa11.89□□□□□ -0.51
SSR4-206ENST00000460616 ITLN2Q8WWU7 325 aaPredicted RBP11.89□□□□□ -0.51
SSR4-206ENST00000460616 UBR5O95071 2799 aaPredicted RBP11.89□□□□□ -0.51
SSR4-206ENST00000460616 ORMDL2Q53FV1 153 aa11.88□□□□□ -0.51
SSR4-206ENST00000460616 LYRM7Q5U5X0 104 aa11.88□□□□□ -0.51
SSR4-206ENST00000460616 RNF182Q8N6D2 247 aa11.88□□□□□ -0.51
SSR4-206ENST00000460616 SMIM2Q9BVW6 85 aa11.88□□□□□ -0.51
SSR4-206ENST00000460616 DYNLRB1Q9NP97 96 aa11.88□□□□□ -0.51
SSR4-206ENST00000460616 IGHV7-4-1A0A0J9YVY3 117 aa11.88□□□□□ -0.51
SSR4-206ENST00000460616 CTSGP08311 255 aa11.88□□□□□ -0.51
SSR4-206ENST00000460616 TOMM6Q96B49 74 aa11.88□□□□□ -0.51
SSR4-206ENST00000460616 PLEKHB2Q96CS7 222 aa11.88□□□□□ -0.51
SSR4-206ENST00000460616 ROS1P08922 2347 aa11.88□□□□□ -0.51
SSR4-206ENST00000460616 ONECUT1Q9UBC0 465 aa11.87□□□□□ -0.51
SSR4-206ENST00000460616 ANKHD1Q8IWZ3 2542 aaKnown RBP11.87□□□□□ -0.51
SSR4-206ENST00000460616 IGHV3-35A0A0C4DH35 117 aa11.87□□□□□ -0.51
SSR4-206ENST00000460616 RBAKDNA6NC62 111 aa11.87□□□□□ -0.51
SSR4-206ENST00000460616 ZNF688P0C7X2 276 aa11.87□□□□□ -0.51
SSR4-206ENST00000460616 SLC25A16P16260 332 aa11.87□□□□□ -0.51
SSR4-206ENST00000460616 AGPAT4-IT1Q9H0P7 198 aa11.87□□□□□ -0.51
SSR4-206ENST00000460616 UTP20O75691 2785 aaKnown RBP11.87□□□□□ -0.51
SSR4-206ENST00000460616 A8MWV9 139 aa11.86□□□□□ -0.51
SSR4-206ENST00000460616 CD7P09564 240 aa11.86□□□□□ -0.51
SSR4-206ENST00000460616 ZFAND6Q6FIF0 208 aa11.86□□□□□ -0.51
SSR4-206ENST00000460616 NPBQ8NG41 125 aa11.86□□□□□ -0.51
SSR4-206ENST00000460616 LINC01560Q8TB33 94 aa11.86□□□□□ -0.51
SSR4-206ENST00000460616 H3BVH4 76 aa11.86□□□□□ -0.51
SSR4-206ENST00000460616 SCGB2A1O75556 95 aa11.86□□□□□ -0.51
SSR4-206ENST00000460616 TCL1BO95988 128 aa11.86□□□□□ -0.51
SSR4-206ENST00000460616 IGFBPL1Q8WX77 278 aa11.86□□□□□ -0.51
SSR4-206ENST00000460616 SS18L2Q9UHA2 77 aa11.86□□□□□ -0.51
SSR4-206ENST00000460616 TRBV20-1A0A075B6N2 111 aa11.85□□□□□ -0.51
SSR4-206ENST00000460616 IGHV4-4A0A075B6R2 117 aa11.85□□□□□ -0.51
SSR4-206ENST00000460616 GAGE5Q13069 117 aa11.85□□□□□ -0.51
SSR4-206ENST00000460616 GAGE6Q13070 117 aa11.85□□□□□ -0.51
SSR4-206ENST00000460616 HES1Q14469 280 aa11.85□□□□□ -0.51
SSR4-206ENST00000460616 FBXL19-AS1Q494R0 122 aa11.85□□□□□ -0.51
SSR4-206ENST00000460616 NDUFA11Q86Y39 141 aa11.85□□□□□ -0.51
SSR4-206ENST00000460616 TEX29Q8N6K0 151 aa11.85□□□□□ -0.51
SSR4-206ENST00000460616 KLHL30-AS1Q8NEE0 82 aa11.85□□□□□ -0.51
SSR4-206ENST00000460616 BAALCQ8WXS3 180 aa11.85□□□□□ -0.51
SSR4-206ENST00000460616 SLC50A1Q9BRV3 221 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 685.5 ms