RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 BPIFCQ8NFQ6 507 aa2.39□□□□□ -2.03
ECHDC1-211ENST00000460558 OR10P1Q8NGE3 313 aa2.39□□□□□ -2.03
ECHDC1-211ENST00000460558 TYMSOSQ8TAI1 123 aa2.39□□□□□ -2.03
ECHDC1-211ENST00000460558 LRRC20Q8TCA0 184 aa2.39□□□□□ -2.03
ECHDC1-211ENST00000460558 ZNF431Q8TF32 576 aaPredicted RBP2.39□□□□□ -2.03
ECHDC1-211ENST00000460558 CHCHD10Q8WYQ3 142 aaPredicted RBP2.39□□□□□ -2.03
ECHDC1-211ENST00000460558 DNAJC30Q96LL9 226 aa2.39□□□□□ -2.03
ECHDC1-211ENST00000460558 CCDC90BQ9GZT6 254 aa2.39□□□□□ -2.03
ECHDC1-211ENST00000460558 Q9UF83 564 aa2.39□□□□□ -2.03
ECHDC1-211ENST00000460558 KLK12Q9UKR0 248 aa2.39□□□□□ -2.03
ECHDC1-211ENST00000460558 ORC6Q9Y5N6 252 aa2.39□□□□□ -2.03
ECHDC1-211ENST00000460558 SYNE2Q8WXH0 6885 aaKnown RBP2.39□□□□□ -2.03
ECHDC1-211ENST00000460558 USH2AO75445 5202 aa2.39□□□□□ -2.03
ECHDC1-211ENST00000460558 TRAV4A0A0B4J268 109 aa2.38□□□□□ -2.03
ECHDC1-211ENST00000460558 A0A0G2JRQ6 117 aa2.38□□□□□ -2.03
ECHDC1-211ENST00000460558 IRGMA1A4Y4 181 aa2.38□□□□□ -2.03
ECHDC1-211ENST00000460558 C7orf71A4D174 169 aa2.38□□□□□ -2.03
ECHDC1-211ENST00000460558 MPDU1O75352 247 aa2.38□□□□□ -2.03
ECHDC1-211ENST00000460558 SERF1AO75920 110 aa2.38□□□□□ -2.03
ECHDC1-211ENST00000460558 SLC25A5P05141 298 aaKnown RBP2.38□□□□□ -2.03
ECHDC1-211ENST00000460558 S100GP29377 79 aa2.38□□□□□ -2.03
ECHDC1-211ENST00000460558 UBE2D1P51668 147 aa2.38□□□□□ -2.03
ECHDC1-211ENST00000460558 GNG2P59768 71 aa2.38□□□□□ -2.03
ECHDC1-211ENST00000460558 POLR2GP62487 172 aaKnown RBP eCLIP2.38□□□□□ -2.03
ECHDC1-211ENST00000460558 ZNF90Q03938 601 aa2.38□□□□□ -2.03
ECHDC1-211ENST00000460558 GUK1Q16774 197 aa2.38□□□□□ -2.03
ECHDC1-211ENST00000460558 CDNFQ49AH0 187 aa2.38□□□□□ -2.03
ECHDC1-211ENST00000460558 C2orf83Q53S99 150 aa2.38□□□□□ -2.03
ECHDC1-211ENST00000460558 ACOT7LQ6ZUV0 252 aa2.38□□□□□ -2.03
ECHDC1-211ENST00000460558 NIT1Q86X76 327 aa2.38□□□□□ -2.03
ECHDC1-211ENST00000460558 ARRDC1Q8N5I2 433 aa2.38□□□□□ -2.03
ECHDC1-211ENST00000460558 FER1L6-AS1Q8NA97 138 aa2.38□□□□□ -2.03
ECHDC1-211ENST00000460558 INO80EQ8NBZ0 244 aaPredicted RBP2.38□□□□□ -2.03
ECHDC1-211ENST00000460558 ZNF485Q8NCK3 441 aa2.38□□□□□ -2.03
ECHDC1-211ENST00000460558 OR4C5Q8NGB2 326 aa2.38□□□□□ -2.03
ECHDC1-211ENST00000460558 UFD1Q92890 307 aa2.38□□□□□ -2.03
ECHDC1-211ENST00000460558 MRGPRFQ96AM1 343 aa2.38□□□□□ -2.03
ECHDC1-211ENST00000460558 ODF3Q96PU9 254 aa2.38□□□□□ -2.03
ECHDC1-211ENST00000460558 PRADC1Q9BSG0 188 aa2.38□□□□□ -2.03
ECHDC1-211ENST00000460558 TMEM222Q9H0R3 208 aa2.38□□□□□ -2.03
ECHDC1-211ENST00000460558 C8orf4Q9NR00 106 aa2.38□□□□□ -2.03
ECHDC1-211ENST00000460558 SSR3Q9UNL2 185 aa2.38□□□□□ -2.03
ECHDC1-211ENST00000460558 CSDC2Q9Y534 153 aaKnown RBP2.38□□□□□ -2.03
ECHDC1-211ENST00000460558 MUC17Q685J3 4493 aa2.37□□□□□ -2.03
ECHDC1-211ENST00000460558 A0A087WWC5 75 aa2.37□□□□□ -2.03
ECHDC1-211ENST00000460558 PGPA6NDG6 321 aa2.37□□□□□ -2.03
ECHDC1-211ENST00000460558 GABARAPH6UMI1 98 aa2.37□□□□□ -2.03
ECHDC1-211ENST00000460558 GPR31O00270 319 aa2.37□□□□□ -2.03
ECHDC1-211ENST00000460558 GABARAPO95166 117 aa2.37□□□□□ -2.03
ECHDC1-211ENST00000460558 TSPAN13O95857 204 aa2.37□□□□□ -2.03
ECHDC1-211ENST00000460558 CFDP00746 253 aaPredicted RBP2.37□□□□□ -2.03
ECHDC1-211ENST00000460558 IFNA7P01567 189 aa2.37□□□□□ -2.03
ECHDC1-211ENST00000460558 CRPP02741 224 aa2.37□□□□□ -2.03
ECHDC1-211ENST00000460558 TCRBP04435 133 aa2.37□□□□□ -2.03
ECHDC1-211ENST00000460558 RPL7P18124 248 aaKnown RBP2.37□□□□□ -2.03
ECHDC1-211ENST00000460558 AKR1C2P52895 323 aa2.37□□□□□ -2.03
ECHDC1-211ENST00000460558 TAS2R20P59543 309 aa2.37□□□□□ -2.03
ECHDC1-211ENST00000460558 MT1HP80294 61 aa2.37□□□□□ -2.03
ECHDC1-211ENST00000460558 RAB31Q13636 194 aa2.37□□□□□ -2.03
ECHDC1-211ENST00000460558 RHOHQ15669 191 aa2.37□□□□□ -2.03
ECHDC1-211ENST00000460558 KRTAP20-1Q3LI63 56 aa2.37□□□□□ -2.03
ECHDC1-211ENST00000460558 RNASEKQ6P5S7 137 aaKnown RBP2.37□□□□□ -2.03
ECHDC1-211ENST00000460558 Q6ZQT7 251 aa2.37□□□□□ -2.03
ECHDC1-211ENST00000460558 MTURNQ8N3F0 131 aa2.37□□□□□ -2.03
ECHDC1-211ENST00000460558 RHOXF1Q8NHV9 184 aa2.37□□□□□ -2.03
ECHDC1-211ENST00000460558 DIRC1Q969H9 104 aa2.37□□□□□ -2.03
ECHDC1-211ENST00000460558 RBKSQ9H477 322 aa2.37□□□□□ -2.03
ECHDC1-211ENST00000460558 DIABLOQ9NR28 239 aa2.37□□□□□ -2.03
ECHDC1-211ENST00000460558 RABL2AQ9UBK7 228 aaPredicted RBP2.37□□□□□ -2.03
ECHDC1-211ENST00000460558 A0A087WX48 190 aa2.36□□□□□ -2.03
ECHDC1-211ENST00000460558 IGKV2-24A0A0C4DH68 120 aa2.36□□□□□ -2.03
ECHDC1-211ENST00000460558 MUC21A0A0G2JKD1 596 aa2.36□□□□□ -2.03
ECHDC1-211ENST00000460558 LINC00854A0A1B0GVQ3 168 aa2.36□□□□□ -2.03
ECHDC1-211ENST00000460558 TCRBV3S1A0A5B6 114 aa2.36□□□□□ -2.03
ECHDC1-211ENST00000460558 FAM168BA1KXE4 195 aa2.36□□□□□ -2.03
ECHDC1-211ENST00000460558 CASQ2O14958 399 aaPredicted RBP2.36□□□□□ -2.03
ECHDC1-211ENST00000460558 IGKV1-39P01597 117 aa2.36□□□□□ -2.03
ECHDC1-211ENST00000460558 IGKV1D-39P04432 117 aa2.36□□□□□ -2.03
ECHDC1-211ENST00000460558 UCHL1P09936 223 aa2.36□□□□□ -2.03
ECHDC1-211ENST00000460558 HLA-DMAP28067 261 aa2.36□□□□□ -2.03
ECHDC1-211ENST00000460558 SPCS3P61009 180 aa2.36□□□□□ -2.03
ECHDC1-211ENST00000460558 LGI3Q8N145 548 aa2.36□□□□□ -2.03
ECHDC1-211ENST00000460558 SLC25A29Q8N8R3 303 aa2.36□□□□□ -2.03
ECHDC1-211ENST00000460558 NKAPP1Q8N9T2 125 aa2.36□□□□□ -2.03
ECHDC1-211ENST00000460558 PGLYRP4Q96LB8 373 aa2.36□□□□□ -2.03
ECHDC1-211ENST00000460558 CHCHD7Q9BUK0 85 aa2.36□□□□□ -2.03
ECHDC1-211ENST00000460558 TMEM147Q9BVK8 224 aa2.36□□□□□ -2.03
ECHDC1-211ENST00000460558 C20orf85Q9H1P6 137 aa2.36□□□□□ -2.03
ECHDC1-211ENST00000460558 ATG5Q9H1Y0 275 aa2.36□□□□□ -2.03
ECHDC1-211ENST00000460558 TP53TG3Q9ULZ0 132 aa2.36□□□□□ -2.03
ECHDC1-211ENST00000460558 V9GY05 133 aa2.36□□□□□ -2.03
ECHDC1-211ENST00000460558 MACF1Q9UPN3 7388 aaKnown RBP2.36□□□□□ -2.03
ECHDC1-211ENST00000460558 IGKV1D-37A0A075B6S9 117 aa2.35□□□□□ -2.03
ECHDC1-211ENST00000460558 TRBV6-4A0A1B0GX49 114 aa2.35□□□□□ -2.03
ECHDC1-211ENST00000460558 EFCAB10A6NFE3 127 aa2.35□□□□□ -2.03
ECHDC1-211ENST00000460558 KLLNB2CW77 178 aa2.35□□□□□ -2.03
ECHDC1-211ENST00000460558 M0R2T5 61 aa2.35□□□□□ -2.03
ECHDC1-211ENST00000460558 MYL12BO14950 172 aa2.35□□□□□ -2.03
ECHDC1-211ENST00000460558 NDUFS6O75380 124 aaKnown RBP2.35□□□□□ -2.03
ECHDC1-211ENST00000460558 WBP4O75554 376 aaKnown RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms