RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 C9orf47Q6ZRZ4 202 aa13.79□□□□□ -0.2
HPS3-202ENST00000460120 SMIM15Q7Z3B0 74 aa13.79□□□□□ -0.2
HPS3-202ENST00000460120 OR2K2Q8NGT1 345 aa13.79□□□□□ -0.2
HPS3-202ENST00000460120 CNFNQ9BYD5 112 aa13.79□□□□□ -0.2
HPS3-202ENST00000460120 MSMBP08118 114 aa13.79□□□□□ -0.2
HPS3-202ENST00000460120 S100A4P26447 101 aaKnown RBP13.79□□□□□ -0.2
HPS3-202ENST00000460120 LGALS9BQ3B8N2 356 aa13.79□□□□□ -0.2
HPS3-202ENST00000460120 LGALS9CQ6DKI2 356 aa13.79□□□□□ -0.2
HPS3-202ENST00000460120 NAA38Q9BRA0 125 aaKnown RBP13.79□□□□□ -0.2
HPS3-202ENST00000460120 FAM208BQ5VWN6 2430 aa13.79□□□□□ -0.2
HPS3-202ENST00000460120 C7orf71A4D174 169 aa13.78□□□□□ -0.2
HPS3-202ENST00000460120 TMEM238C9JI98 176 aa13.78□□□□□ -0.2
HPS3-202ENST00000460120 KLK9Q2XQG4 91 aa13.78□□□□□ -0.2
HPS3-202ENST00000460120 C12orf54Q6X4T0 127 aa13.78□□□□□ -0.2
HPS3-202ENST00000460120 OR10J6PQ8NGY7 276 aa13.78□□□□□ -0.2
HPS3-202ENST00000460120 NPFFR1Q9GZQ6 430 aa13.78□□□□□ -0.2
HPS3-202ENST00000460120 KLK9Q9UKQ9 250 aa13.78□□□□□ -0.2
HPS3-202ENST00000460120 SRSF2Q01130 221 aaKnown RBP13.78□□□□□ -0.2
HPS3-202ENST00000460120 C9orf139Q6ZV77 190 aa13.78□□□□□ -0.2
HPS3-202ENST00000460120 FOXC2Q99958 501 aa13.78□□□□□ -0.2
HPS3-202ENST00000460120 VPS25Q9BRG1 176 aa13.78□□□□□ -0.2
HPS3-202ENST00000460120 DOPEY1Q5JWR5 2465 aa13.78□□□□□ -0.2
HPS3-202ENST00000460120 PPBPP02775 128 aa13.77□□□□□ -0.2
HPS3-202ENST00000460120 RHPN1-AS1Q9BWJ2 59 aa13.77□□□□□ -0.2
HPS3-202ENST00000460120 MEGF9Q9H1U4 602 aa13.77□□□□□ -0.2
HPS3-202ENST00000460120 UBE2V1Q13404 147 aa13.77□□□□□ -0.21
HPS3-202ENST00000460120 A6NDX4 124 aa13.77□□□□□ -0.21
HPS3-202ENST00000460120 DOPEY2Q9Y3R5 2298 aa13.76□□□□□ -0.21
HPS3-202ENST00000460120 NDUFA4O00483 81 aa13.76□□□□□ -0.21
HPS3-202ENST00000460120 IGHG2P01859 326 aa13.76□□□□□ -0.21
HPS3-202ENST00000460120 PRB1P04280 392 aa13.76□□□□□ -0.21
HPS3-202ENST00000460120 FGF6P10767 208 aa13.76□□□□□ -0.21
HPS3-202ENST00000460120 GNRH2O43555 120 aa13.76□□□□□ -0.21
HPS3-202ENST00000460120 MGPP08493 103 aa13.76□□□□□ -0.21
HPS3-202ENST00000460120 FCER1GP30273 86 aa13.76□□□□□ -0.21
HPS3-202ENST00000460120 C14orf178Q8N769 122 aaPredicted RBP13.76□□□□□ -0.21
HPS3-202ENST00000460120 OR4C5Q8NGB2 326 aa13.76□□□□□ -0.21
HPS3-202ENST00000460120 NXT2Q9NPJ8 142 aaKnown RBP13.76□□□□□ -0.21
HPS3-202ENST00000460120 AMMECR1LQ6DCA0 310 aa13.75□□□□□ -0.21
HPS3-202ENST00000460120 IGKV3-20P01619 116 aa13.75□□□□□ -0.21
HPS3-202ENST00000460120 ANXA2RQ3ZCQ2 193 aa13.75□□□□□ -0.21
HPS3-202ENST00000460120 ZFAND2AQ8N6M9 145 aa13.75□□□□□ -0.21
HPS3-202ENST00000460120 IGHV4-59P01825 116 aa13.74□□□□□ -0.21
HPS3-202ENST00000460120 TMEM97Q5BJF2 176 aa13.74□□□□□ -0.21
HPS3-202ENST00000460120 GTSCR1Q86UQ5 136 aa13.74□□□□□ -0.21
HPS3-202ENST00000460120 DEFB125Q8N687 156 aa13.74□□□□□ -0.21
HPS3-202ENST00000460120 MRPL53Q96EL3 112 aaKnown RBP13.74□□□□□ -0.21
HPS3-202ENST00000460120 IGKV2D-26A0A0A0MRZ7 120 aa13.74□□□□□ -0.21
HPS3-202ENST00000460120 TMEM160Q9NX00 188 aa13.74□□□□□ -0.21
HPS3-202ENST00000460120 SMIM17P0DL12 118 aa13.73□□□□□ -0.21
HPS3-202ENST00000460120 NRACQ8N912 160 aa13.73□□□□□ -0.21
HPS3-202ENST00000460120 A1L4Q6 167 aa13.73□□□□□ -0.21
HPS3-202ENST00000460120 CD5LO43866 347 aa13.73□□□□□ -0.21
HPS3-202ENST00000460120 Q8N8P6 123 aa13.73□□□□□ -0.21
HPS3-202ENST00000460120 RAB37Q96AX2 223 aa13.73□□□□□ -0.21
HPS3-202ENST00000460120 RPL39LQ96EH5 51 aaKnown RBP13.73□□□□□ -0.21
HPS3-202ENST00000460120 PHLDA3Q9Y5J5 127 aa13.73□□□□□ -0.21
HPS3-202ENST00000460120 ODF1Q14990 250 aa13.72□□□□□ -0.21
HPS3-202ENST00000460120 CSTL1Q9H114 145 aa13.72□□□□□ -0.21
HPS3-202ENST00000460120 SOCS3O14543 225 aa13.72□□□□□ -0.21
HPS3-202ENST00000460120 FBN2P35556 2912 aa13.72□□□□□ -0.21
HPS3-202ENST00000460120 USMG5Q96IX5 58 aa13.71□□□□□ -0.21
HPS3-202ENST00000460120 CRIP2P52943 208 aaPredicted RBP13.71□□□□□ -0.21
HPS3-202ENST00000460120 DEFB112Q30KQ8 113 aa13.71□□□□□ -0.21
HPS3-202ENST00000460120 NEGR1Q7Z3B1 354 aa13.71□□□□□ -0.21
HPS3-202ENST00000460120 LINC00477Q96M19 166 aa13.71□□□□□ -0.21
HPS3-202ENST00000460120 IGLV2-18A0A075B6J9 118 aa13.7□□□□□ -0.22
HPS3-202ENST00000460120 TRAV8-6A0A0B4J262 113 aa13.7□□□□□ -0.22
HPS3-202ENST00000460120 TRAV21A0A0B4J279 112 aa13.7□□□□□ -0.22
HPS3-202ENST00000460120 TMEM8BA6NDV4 472 aa13.7□□□□□ -0.22
HPS3-202ENST00000460120 ASIPP42127 132 aa13.7□□□□□ -0.22
HPS3-202ENST00000460120 BOD1L2Q8IYS8 172 aa13.7□□□□□ -0.22
HPS3-202ENST00000460120 CLUHP3Q96NS8 147 aa13.7□□□□□ -0.22
HPS3-202ENST00000460120 DUX5Q96PT3 197 aa13.7□□□□□ -0.22
HPS3-202ENST00000460120 LRRK2Q5S007 2527 aa13.7□□□□□ -0.22
HPS3-202ENST00000460120 K7EMI3 77 aa13.7□□□□□ -0.22
HPS3-202ENST00000460120 NDUFS8O00217 210 aa13.7□□□□□ -0.22
HPS3-202ENST00000460120 LAGE3Q14657 143 aa13.7□□□□□ -0.22
HPS3-202ENST00000460120 ZNF462Q96JM2 2506 aa13.7□□□□□ -0.22
HPS3-202ENST00000460120 OVOL1O14753 267 aa13.7□□□□□ -0.22
HPS3-202ENST00000460120 DAZ1Q9NQZ3 744 aaKnown RBP13.7□□□□□ -0.22
HPS3-202ENST00000460120 B4DSR2 109 aa13.69□□□□□ -0.22
HPS3-202ENST00000460120 MRPL35Q9NZE8 188 aaKnown RBP13.69□□□□□ -0.22
HPS3-202ENST00000460120 IGKCP01834 107 aa13.69□□□□□ -0.22
HPS3-202ENST00000460120 ZC2HC1BQ5TFG8 222 aa13.69□□□□□ -0.22
HPS3-202ENST00000460120 OR1N2Q8NGR9 330 aa13.69□□□□□ -0.22
HPS3-202ENST00000460120 ANKRD17O75179 2603 aaKnown RBP13.68□□□□□ -0.22
HPS3-202ENST00000460120 MYOZ3Q8TDC0 251 aa13.68□□□□□ -0.22
HPS3-202ENST00000460120 TGFAP01135 160 aa13.68□□□□□ -0.22
HPS3-202ENST00000460120 ZNF688P0C7X2 276 aa13.68□□□□□ -0.22
HPS3-202ENST00000460120 JPT2Q9H910 190 aa13.68□□□□□ -0.22
HPS3-202ENST00000460120 PEF1Q9UBV8 284 aaKnown RBP13.68□□□□□ -0.22
HPS3-202ENST00000460120 A0A0G2JLM5 398 aa13.67□□□□□ -0.22
HPS3-202ENST00000460120 IGLV1-40P01703 118 aa13.67□□□□□ -0.22
HPS3-202ENST00000460120 DPF1Q92782 380 aa13.67□□□□□ -0.22
HPS3-202ENST00000460120 HHLA3Q9XRX5 114 aa13.67□□□□□ -0.22
HPS3-202ENST00000460120 ABCA12Q86UK0 2595 aa13.66□□□□□ -0.22
HPS3-202ENST00000460120 CUBNO60494 3623 aa13.66□□□□□ -0.22
HPS3-202ENST00000460120 TRAV12-3A0A0B4J271 114 aa13.66□□□□□ -0.22
HPS3-202ENST00000460120 SMPXQ9UHP9 88 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms