RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 LYPD6BQ8NI32 183 aa7.62□□□□□ -1.19
UBR4-208ENST00000459947 H3BNG1 76 aa7.62□□□□□ -1.19
UBR4-208ENST00000459947 BAGE2Q86Y30 109 aa7.62□□□□□ -1.19
UBR4-208ENST00000459947 NAGKQ9UJ70 344 aa7.62□□□□□ -1.19
UBR4-208ENST00000459947 A0A1B0GV50 99 aa7.62□□□□□ -1.19
UBR4-208ENST00000459947 MED14OSP0DP75 135 aa7.62□□□□□ -1.19
UBR4-208ENST00000459947 RPS20P60866 119 aaKnown RBP7.62□□□□□ -1.19
UBR4-208ENST00000459947 LCE6AA0A183 80 aa7.61□□□□□ -1.19
UBR4-208ENST00000459947 M0R2P5 195 aa7.61□□□□□ -1.19
UBR4-208ENST00000459947 ASIPP42127 132 aa7.61□□□□□ -1.19
UBR4-208ENST00000459947 NDUFA5Q16718 116 aa7.61□□□□□ -1.19
UBR4-208ENST00000459947 SMDT1Q9H4I9 107 aa7.61□□□□□ -1.19
UBR4-208ENST00000459947 GSN-AS1Q9NRJ2 163 aa7.61□□□□□ -1.19
UBR4-208ENST00000459947 FAM3BP58499 235 aaPredicted RBP7.61□□□□□ -1.19
UBR4-208ENST00000459947 CCL20P78556 96 aa7.61□□□□□ -1.19
UBR4-208ENST00000459947 ZNF506Q5JVG8 444 aa7.61□□□□□ -1.19
UBR4-208ENST00000459947 TVP23CQ96ET8 276 aa7.61□□□□□ -1.19
UBR4-208ENST00000459947 TRGV2A0A075B6R0 118 aa7.61□□□□□ -1.19
UBR4-208ENST00000459947 SCO2A0A1W2PP80 73 aa7.61□□□□□ -1.19
UBR4-208ENST00000459947 SYT8Q8NBV8 401 aa7.61□□□□□ -1.19
UBR4-208ENST00000459947 TRAV34A0A0B4J273 112 aa7.6□□□□□ -1.19
UBR4-208ENST00000459947 DEFB130BP0DP73 79 aa7.6□□□□□ -1.19
UBR4-208ENST00000459947 DEFB130AP0DP74 79 aa7.6□□□□□ -1.19
UBR4-208ENST00000459947 MUC21Q5SSG8 566 aa7.6□□□□□ -1.19
UBR4-208ENST00000459947 LGALS9CQ6DKI2 356 aa7.6□□□□□ -1.19
UBR4-208ENST00000459947 C8orf49Q96NF6 230 aa7.6□□□□□ -1.19
UBR4-208ENST00000459947 MED9Q9NWA0 146 aa7.6□□□□□ -1.19
UBR4-208ENST00000459947 TRGV1A0A0A0MS02 117 aa7.6□□□□□ -1.19
UBR4-208ENST00000459947 IGHV3-16A0A0C4DH30 117 aa7.6□□□□□ -1.19
UBR4-208ENST00000459947 XKRY2A2RUG3 117 aa7.6□□□□□ -1.19
UBR4-208ENST00000459947 S100A4P26447 101 aaKnown RBP7.6□□□□□ -1.19
UBR4-208ENST00000459947 LINC01559Q495D7 138 aa7.6□□□□□ -1.19
UBR4-208ENST00000459947 BOLA1Q9Y3E2 137 aa7.6□□□□□ -1.19
UBR4-208ENST00000459947 IGHV4-4A0A075B6R2 117 aa7.6□□□□□ -1.19
UBR4-208ENST00000459947 RBFOX3A6NFN3 312 aa7.6□□□□□ -1.19
UBR4-208ENST00000459947 TYMSP04818 313 aa7.6□□□□□ -1.19
UBR4-208ENST00000459947 P0DMU3 169 aa7.6□□□□□ -1.19
UBR4-208ENST00000459947 FAM231AP0DMU4 169 aa7.6□□□□□ -1.19
UBR4-208ENST00000459947 FAM231CP0DMU5 169 aa7.6□□□□□ -1.19
UBR4-208ENST00000459947 ZNF674Q2M3X9 581 aa7.6□□□□□ -1.19
UBR4-208ENST00000459947 IGLL5B9A064 214 aa7.59□□□□□ -1.19
UBR4-208ENST00000459947 GNG4P50150 75 aa7.59□□□□□ -1.19
UBR4-208ENST00000459947 RAB14P61106 215 aa7.59□□□□□ -1.19
UBR4-208ENST00000459947 DAZAP1Q96EP5 407 aaKnown RBP7.59□□□□□ -1.19
UBR4-208ENST00000459947 GAGE12BA1L429 117 aa7.59□□□□□ -1.19
UBR4-208ENST00000459947 C9JCJ5 164 aa7.59□□□□□ -1.19
UBR4-208ENST00000459947 F5H768 121 aa7.59□□□□□ -1.19
UBR4-208ENST00000459947 GAGE7O76087 117 aa7.59□□□□□ -1.19
UBR4-208ENST00000459947 GAGE12FP0CL80 117 aa7.59□□□□□ -1.19
UBR4-208ENST00000459947 GAGE12GP0CL81 117 aa7.59□□□□□ -1.19
UBR4-208ENST00000459947 GAGE12IP0CL82 117 aa7.59□□□□□ -1.19
UBR4-208ENST00000459947 RASL10AQ92737 203 aa7.59□□□□□ -1.19
UBR4-208ENST00000459947 HUWE1Q7Z6Z7 4374 aaKnown RBP7.59□□□□□ -1.19
UBR4-208ENST00000459947 B4DEV8 164 aa7.59□□□□□ -1.19
UBR4-208ENST00000459947 SH2D1AO60880 128 aa7.59□□□□□ -1.19
UBR4-208ENST00000459947 PRB4P10163 310 aaPredicted RBP7.59□□□□□ -1.19
UBR4-208ENST00000459947 RPL35P42766 123 aaKnown RBP7.59□□□□□ -1.19
UBR4-208ENST00000459947 LY96Q9Y6Y9 160 aa7.59□□□□□ -1.19
UBR4-208ENST00000459947 TRAV4A0A0B4J268 109 aa7.58□□□□□ -1.2
UBR4-208ENST00000459947 ORM1P02763 201 aa7.58□□□□□ -1.2
UBR4-208ENST00000459947 HTN3P15516 51 aa7.58□□□□□ -1.2
UBR4-208ENST00000459947 TEX261Q6UWH6 196 aa7.58□□□□□ -1.2
UBR4-208ENST00000459947 SGK494Q96LW2 274 aa7.58□□□□□ -1.2
UBR4-208ENST00000459947 APLNQ9ULZ1 77 aa7.58□□□□□ -1.2
UBR4-208ENST00000459947 SH2D6Q7Z4S9 175 aa7.58□□□□□ -1.2
UBR4-208ENST00000459947 C9orf85Q96MD7 179 aa7.58□□□□□ -1.2
UBR4-208ENST00000459947 FAM74A3Q4VXF1 159 aa7.58□□□□□ -1.2
UBR4-208ENST00000459947 ZC2HC1AQ96GY0 325 aa7.58□□□□□ -1.2
UBR4-208ENST00000459947 RNF212Q495C1 297 aa7.57□□□□□ -1.2
UBR4-208ENST00000459947 ZNF767PQ75MW2 155 aa7.57□□□□□ -1.2
UBR4-208ENST00000459947 LINC00479Q96M42 142 aa7.57□□□□□ -1.2
UBR4-208ENST00000459947 MLST8Q9BVC4 326 aa7.57□□□□□ -1.2
UBR4-208ENST00000459947 IL36BQ9NZH7 164 aa7.57□□□□□ -1.2
UBR4-208ENST00000459947 A8MWV9 139 aa7.57□□□□□ -1.2
UBR4-208ENST00000459947 RHODO00212 210 aa7.57□□□□□ -1.2
UBR4-208ENST00000459947 PEA15Q15121 130 aa7.57□□□□□ -1.2
UBR4-208ENST00000459947 ZNF80P51504 273 aaPredicted RBP7.57□□□□□ -1.2
UBR4-208ENST00000459947 OR5I1Q13606 314 aa7.57□□□□□ -1.2
UBR4-208ENST00000459947 CENPWQ5EE01 88 aa7.57□□□□□ -1.2
UBR4-208ENST00000459947 Q6ZTI0 123 aa7.57□□□□□ -1.2
UBR4-208ENST00000459947 PCNPQ8WW12 178 aaKnown RBP7.57□□□□□ -1.2
UBR4-208ENST00000459947 LINC00476Q8WZB0 136 aa7.57□□□□□ -1.2
UBR4-208ENST00000459947 KRBOX1C9JBD0 128 aa7.56□□□□□ -1.2
UBR4-208ENST00000459947 EIF5A2Q9GZV4 153 aaKnown RBP7.56□□□□□ -1.2
UBR4-208ENST00000459947 ZFP82Q8N141 532 aa7.56□□□□□ -1.2
UBR4-208ENST00000459947 OR4C5Q8NGB2 326 aa7.56□□□□□ -1.2
UBR4-208ENST00000459947 PRO0255Q9UI72 69 aa7.56□□□□□ -1.2
UBR4-208ENST00000459947 TMEM88Q6PEY1 159 aa7.55□□□□□ -1.2
UBR4-208ENST00000459947 MRPL16Q9NX20 251 aaKnown RBP7.55□□□□□ -1.2
UBR4-208ENST00000459947 MDFICQ9P1T7 246 aa7.55□□□□□ -1.2
UBR4-208ENST00000459947 TOR2AQ5JU69 321 aa7.55□□□□□ -1.2
UBR4-208ENST00000459947 TRGV4A0A0C4DH28 118 aa7.55□□□□□ -1.2
UBR4-208ENST00000459947 GNRH2O43555 120 aa7.55□□□□□ -1.2
UBR4-208ENST00000459947 ZFP2Q6ZN57 461 aa7.55□□□□□ -1.2
UBR4-208ENST00000459947 UBE2DNLQ8IWF7 75 aa7.55□□□□□ -1.2
UBR4-208ENST00000459947 STAB2Q8WWQ8 2551 aa7.55□□□□□ -1.2
UBR4-208ENST00000459947 RS1O15537 224 aa7.54□□□□□ -1.2
UBR4-208ENST00000459947 MGST1P10620 155 aaKnown RBP7.54□□□□□ -1.2
UBR4-208ENST00000459947 PHLDA3Q9Y5J5 127 aa7.54□□□□□ -1.2
UBR4-208ENST00000459947 ICOSQ9Y6W8 199 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms