RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 SSBP1Q04837 148 aaKnown RBP1.74□□□□□ -2.13
R3HDM1-212ENST00000456040 NNATQ16517 81 aa1.74□□□□□ -2.13
R3HDM1-212ENST00000456040 MIAQ16674 131 aa1.74□□□□□ -2.13
R3HDM1-212ENST00000456040 ZNF791Q3KP31 576 aaPredicted RBP1.74□□□□□ -2.13
R3HDM1-212ENST00000456040 VMA21Q3ZAQ7 101 aa1.74□□□□□ -2.13
R3HDM1-212ENST00000456040 HSD17B12Q53GQ0 312 aa1.74□□□□□ -2.13
R3HDM1-212ENST00000456040 PYDC2Q56P42 97 aa1.74□□□□□ -2.13
R3HDM1-212ENST00000456040 TMEM244Q5VVB8 128 aa1.74□□□□□ -2.13
R3HDM1-212ENST00000456040 MIR17HGQ75NE6 70 aa1.74□□□□□ -2.13
R3HDM1-212ENST00000456040 LHFPL1Q86WI0 220 aa1.74□□□□□ -2.13
R3HDM1-212ENST00000456040 LRRC28Q86X40 367 aaPredicted RBP1.74□□□□□ -2.13
R3HDM1-212ENST00000456040 TCTE3Q8IZS6 198 aa1.74□□□□□ -2.13
R3HDM1-212ENST00000456040 HIST3H2BBQ8N257 126 aa1.74□□□□□ -2.13
R3HDM1-212ENST00000456040 RPRMLQ8N4K4 120 aa1.74□□□□□ -2.13
R3HDM1-212ENST00000456040 TEX29Q8N6K0 151 aa1.74□□□□□ -2.13
R3HDM1-212ENST00000456040 OR10P1Q8NGE3 313 aa1.74□□□□□ -2.13
R3HDM1-212ENST00000456040 OR5D14Q8NGL3 314 aa1.74□□□□□ -2.13
R3HDM1-212ENST00000456040 OR5AK2Q8NH90 309 aa1.74□□□□□ -2.13
R3HDM1-212ENST00000456040 PFN4Q8NHR9 129 aa1.74□□□□□ -2.13
R3HDM1-212ENST00000456040 KLF14Q8TD94 323 aaPredicted RBP1.74□□□□□ -2.13
R3HDM1-212ENST00000456040 SPTSSAQ969W0 71 aa1.74□□□□□ -2.13
R3HDM1-212ENST00000456040 S100A16Q96FQ6 103 aaKnown RBP1.74□□□□□ -2.13
R3HDM1-212ENST00000456040 AP1S3Q96PC3 154 aa1.74□□□□□ -2.13
R3HDM1-212ENST00000456040 S100A13Q99584 98 aa1.74□□□□□ -2.13
R3HDM1-212ENST00000456040 MRPL32Q9BYC8 188 aaKnown RBP1.74□□□□□ -2.13
R3HDM1-212ENST00000456040 TMEM133Q9H2Q1 129 aa1.74□□□□□ -2.13
R3HDM1-212ENST00000456040 RNF122Q9H9V4 155 aa1.74□□□□□ -2.13
R3HDM1-212ENST00000456040 TAS2R8Q9NYW2 309 aa1.74□□□□□ -2.13
R3HDM1-212ENST00000456040 GNG8Q9UK08 70 aa1.74□□□□□ -2.13
R3HDM1-212ENST00000456040 NOP16Q9Y3C1 178 aaKnown RBP1.74□□□□□ -2.13
R3HDM1-212ENST00000456040 S4R3C0 116 aa1.74□□□□□ -2.13
R3HDM1-212ENST00000456040 NINQ8N4C6 2090 aa1.74□□□□□ -2.13
R3HDM1-212ENST00000456040 HEATR5AQ86XA9 2040 aa1.74□□□□□ -2.13
R3HDM1-212ENST00000456040 EML6Q6ZMW3 1958 aa1.74□□□□□ -2.13
R3HDM1-212ENST00000456040 ASCC3Q8N3C0 2202 aaKnown RBP1.74□□□□□ -2.13
R3HDM1-212ENST00000456040 MAP1BP46821 2468 aaKnown RBP1.74□□□□□ -2.13
R3HDM1-212ENST00000456040 AHCTF1Q8WYP5 2266 aa1.73□□□□□ -2.13
R3HDM1-212ENST00000456040 SCN3AQ9NY46 2000 aa1.73□□□□□ -2.13
R3HDM1-212ENST00000456040 TRAV5A0A0B4J249 113 aa1.73□□□□□ -2.13
R3HDM1-212ENST00000456040 TRAV17A0A0B4J275 112 aa1.73□□□□□ -2.13
R3HDM1-212ENST00000456040 J3QQQ9 107 aa1.73□□□□□ -2.13
R3HDM1-212ENST00000456040 K7ERJ3 54 aa1.73□□□□□ -2.13
R3HDM1-212ENST00000456040 M0R2Z0 102 aa1.73□□□□□ -2.13
R3HDM1-212ENST00000456040 CDC42EP2O14613 210 aa1.73□□□□□ -2.13
R3HDM1-212ENST00000456040 KLF7O75840 302 aaPredicted RBP1.73□□□□□ -2.13
R3HDM1-212ENST00000456040 CST7O76096 145 aa1.73□□□□□ -2.13
R3HDM1-212ENST00000456040 DPM2O94777 84 aa1.73□□□□□ -2.13
R3HDM1-212ENST00000456040 CYB5AP00167 134 aa1.73□□□□□ -2.13
R3HDM1-212ENST00000456040 MT-ND4LP03901 98 aa1.73□□□□□ -2.13
R3HDM1-212ENST00000456040 CLPSP04118 112 aa1.73□□□□□ -2.13
R3HDM1-212ENST00000456040 UCHL1P09936 223 aa1.73□□□□□ -2.13
R3HDM1-212ENST00000456040 COX6A1P12074 109 aa1.73□□□□□ -2.13
R3HDM1-212ENST00000456040 RPL28P46779 137 aaKnown RBP1.73□□□□□ -2.13
R3HDM1-212ENST00000456040 RAB5CP51148 216 aa1.73□□□□□ -2.13
R3HDM1-212ENST00000456040 DYNLT3P51808 116 aa1.73□□□□□ -2.13
R3HDM1-212ENST00000456040 LSM3P62310 102 aaKnown RBP1.73□□□□□ -2.13
R3HDM1-212ENST00000456040 CDK5R1Q15078 307 aa1.73□□□□□ -2.13
R3HDM1-212ENST00000456040 MORN2Q502X0 79 aa1.73□□□□□ -2.13
R3HDM1-212ENST00000456040 LYPD6Q86Y78 171 aa1.73□□□□□ -2.13
R3HDM1-212ENST00000456040 SIGLECL1Q8N7X8 197 aa1.73□□□□□ -2.13
R3HDM1-212ENST00000456040 OTOSQ8NHW6 89 aa1.73□□□□□ -2.13
R3HDM1-212ENST00000456040 PP6455Q8WZ26 134 aa1.73□□□□□ -2.13
R3HDM1-212ENST00000456040 SCGB3A1Q96QR1 104 aa1.73□□□□□ -2.13
R3HDM1-212ENST00000456040 HIST1H2BLQ99880 126 aa1.73□□□□□ -2.13
R3HDM1-212ENST00000456040 RERGLQ9H628 205 aa1.73□□□□□ -2.13
R3HDM1-212ENST00000456040 TXNL4BQ9NX01 149 aaKnown RBP1.73□□□□□ -2.13
R3HDM1-212ENST00000456040 MRPL16Q9NX20 251 aaKnown RBP1.73□□□□□ -2.13
R3HDM1-212ENST00000456040 LSM2Q9Y333 95 aaKnown RBP1.73□□□□□ -2.13
R3HDM1-212ENST00000456040 CHCHD2Q9Y6H1 151 aaPredicted RBP1.73□□□□□ -2.13
R3HDM1-212ENST00000456040 U3KQA8 63 aa1.73□□□□□ -2.13
R3HDM1-212ENST00000456040 CUL9Q8IWT3 2517 aa1.73□□□□□ -2.13
R3HDM1-212ENST00000456040 RIF1Q5UIP0 2472 aaKnown RBP1.73□□□□□ -2.13
R3HDM1-212ENST00000456040 COL5A1P20908 1838 aaPredicted RBP1.73□□□□□ -2.13
R3HDM1-212ENST00000456040 RP1P56715 2156 aa1.72□□□□□ -2.13
R3HDM1-212ENST00000456040 SNRNP200O75643 2136 aaKnown RBP1.72□□□□□ -2.13
R3HDM1-212ENST00000456040 IGKV1D-42A0A075B6H8 117 aa1.72□□□□□ -2.13
R3HDM1-212ENST00000456040 IGHV3OR16-8A0A075B7F1 116 aa1.72□□□□□ -2.13
R3HDM1-212ENST00000456040 MEIKINA0A087WXM9 373 aa1.72□□□□□ -2.13
R3HDM1-212ENST00000456040 IGHV3-15A0A0B4J1V0 119 aa1.72□□□□□ -2.13
R3HDM1-212ENST00000456040 A0A0J9YW62 118 aa1.72□□□□□ -2.13
R3HDM1-212ENST00000456040 LOC107984640A0A0U1RRK4 108 aa1.72□□□□□ -2.13
R3HDM1-212ENST00000456040 C11orf86A6NJI1 115 aa1.72□□□□□ -2.13
R3HDM1-212ENST00000456040 GGTLC3B5MD39 225 aa1.72□□□□□ -2.13
R3HDM1-212ENST00000456040 J3QRE1 110 aa1.72□□□□□ -2.13
R3HDM1-212ENST00000456040 DLEU1O43261 78 aa1.72□□□□□ -2.13
R3HDM1-212ENST00000456040 CREBL2O60519 120 aaPredicted RBP1.72□□□□□ -2.13
R3HDM1-212ENST00000456040 GGCTO75223 188 aaKnown RBP1.72□□□□□ -2.13
R3HDM1-212ENST00000456040 MRPL33O75394 65 aaKnown RBP1.72□□□□□ -2.13
R3HDM1-212ENST00000456040 UBL3O95164 117 aa1.72□□□□□ -2.13
R3HDM1-212ENST00000456040 SCTP09683 121 aa1.72□□□□□ -2.13
R3HDM1-212ENST00000456040 TRAPPC2P0DI81 140 aa1.72□□□□□ -2.13
R3HDM1-212ENST00000456040 TRAPPC2BP0DI82 140 aa1.72□□□□□ -2.13
R3HDM1-212ENST00000456040 GZMBP10144 247 aa1.72□□□□□ -2.13
R3HDM1-212ENST00000456040 CCL4P13236 92 aa1.72□□□□□ -2.13
R3HDM1-212ENST00000456040 RNASE4P34096 147 aaKnown RBP1.72□□□□□ -2.13
R3HDM1-212ENST00000456040 NCS1P62166 190 aa1.72□□□□□ -2.13
R3HDM1-212ENST00000456040 SUPT4H1P63272 117 aaKnown RBP1.72□□□□□ -2.13
R3HDM1-212ENST00000456040 FOXF1Q12946 379 aa1.72□□□□□ -2.13
R3HDM1-212ENST00000456040 NDUFA5Q16718 116 aa1.72□□□□□ -2.13
R3HDM1-212ENST00000456040 KRTAP25-1Q3LHN0 102 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms