RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 SNURFLB1AK76 121 aa10.25□□□□□ -0.77
HMGXB4-204ENST00000455359 DEFB4AO15263 64 aa10.25□□□□□ -0.77
HMGXB4-204ENST00000455359 SH2D1AO60880 128 aa10.25□□□□□ -0.77
HMGXB4-204ENST00000455359 IGLV2-8P01709 118 aa10.25□□□□□ -0.77
HMGXB4-204ENST00000455359 EMP1P54849 157 aa10.25□□□□□ -0.77
HMGXB4-204ENST00000455359 MUC21Q5SSG8 566 aa10.25□□□□□ -0.77
HMGXB4-204ENST00000455359 C11orf72Q8NBR9 251 aa10.25□□□□□ -0.77
HMGXB4-204ENST00000455359 DKK2Q9UBU2 259 aa10.25□□□□□ -0.77
HMGXB4-204ENST00000455359 NAGKQ9UJ70 344 aa10.25□□□□□ -0.77
HMGXB4-204ENST00000455359 PRM2P04554 102 aa10.24□□□□□ -0.77
HMGXB4-204ENST00000455359 TCL1AP56279 114 aa10.24□□□□□ -0.77
HMGXB4-204ENST00000455359 ZNF415Q09FC8 603 aa10.24□□□□□ -0.77
HMGXB4-204ENST00000455359 LINC01559Q495D7 138 aa10.24□□□□□ -0.77
HMGXB4-204ENST00000455359 NHLRC2Q8NBF2 726 aa10.24□□□□□ -0.77
HMGXB4-204ENST00000455359 SMIM7Q9BQ49 75 aa10.24□□□□□ -0.77
HMGXB4-204ENST00000455359 IGHV3-16A0A0C4DH30 117 aa10.23□□□□□ -0.77
HMGXB4-204ENST00000455359 ZNF727A8MUV8 499 aa10.23□□□□□ -0.77
HMGXB4-204ENST00000455359 ORM1P02763 201 aa10.23□□□□□ -0.77
HMGXB4-204ENST00000455359 LGALS9BQ3B8N2 356 aa10.23□□□□□ -0.77
HMGXB4-204ENST00000455359 FAM222AQ5U5X8 452 aa10.23□□□□□ -0.77
HMGXB4-204ENST00000455359 UQCC3Q6UW78 93 aa10.23□□□□□ -0.77
HMGXB4-204ENST00000455359 SPXQ9BT56 116 aa10.23□□□□□ -0.77
HMGXB4-204ENST00000455359 GSN-AS1Q9NRJ2 163 aa10.23□□□□□ -0.77
HMGXB4-204ENST00000455359 C11orf21Q9P2W6 132 aa10.23□□□□□ -0.77
HMGXB4-204ENST00000455359 IGKV3D-20A0A0C4DH25 116 aa10.22□□□□□ -0.77
HMGXB4-204ENST00000455359 B4DEV8 164 aa10.22□□□□□ -0.77
HMGXB4-204ENST00000455359 C9JQL5 133 aa10.22□□□□□ -0.77
HMGXB4-204ENST00000455359 TYMSP04818 313 aa10.22□□□□□ -0.77
HMGXB4-204ENST00000455359 CXCL1P09341 107 aa10.22□□□□□ -0.77
HMGXB4-204ENST00000455359 MGST1P10620 155 aaKnown RBP10.22□□□□□ -0.77
HMGXB4-204ENST00000455359 CEBPGP53567 150 aa10.22□□□□□ -0.77
HMGXB4-204ENST00000455359 SRSF3P84103 164 aaKnown RBP10.22□□□□□ -0.77
HMGXB4-204ENST00000455359 SOHLH1Q5JUK2 328 aa10.22□□□□□ -0.77
HMGXB4-204ENST00000455359 DNLZQ5SXM8 178 aa10.22□□□□□ -0.77
HMGXB4-204ENST00000455359 DAZAP1Q96EP5 407 aaKnown RBP10.22□□□□□ -0.77
HMGXB4-204ENST00000455359 NOP10Q9NPE3 64 aaKnown RBP10.22□□□□□ -0.77
HMGXB4-204ENST00000455359 KRBOX1C9JBD0 128 aa10.21□□□□□ -0.78
HMGXB4-204ENST00000455359 GNRH2O43555 120 aa10.21□□□□□ -0.78
HMGXB4-204ENST00000455359 LINC00612Q8N6U2 182 aa10.21□□□□□ -0.78
HMGXB4-204ENST00000455359 OCC1Q8TAD7 63 aa10.21□□□□□ -0.78
HMGXB4-204ENST00000455359 MUC7Q8TAX7 377 aa10.21□□□□□ -0.78
HMGXB4-204ENST00000455359 C18orf15Q96N68 181 aa10.21□□□□□ -0.78
HMGXB4-204ENST00000455359 NDUFAF3Q9BU61 184 aa10.21□□□□□ -0.78
HMGXB4-204ENST00000455359 MDFICQ9P1T7 246 aa10.21□□□□□ -0.78
HMGXB4-204ENST00000455359 C19orf71A6NCJ1 209 aa10.2□□□□□ -0.78
HMGXB4-204ENST00000455359 SPINK4O60575 86 aa10.2□□□□□ -0.78
HMGXB4-204ENST00000455359 ASIPP42127 132 aa10.2□□□□□ -0.78
HMGXB4-204ENST00000455359 RPS20P60866 119 aaKnown RBP10.2□□□□□ -0.78
HMGXB4-204ENST00000455359 TMEM241Q24JQ0 296 aa10.2□□□□□ -0.78
HMGXB4-204ENST00000455359 C12orf74Q32Q52 190 aa10.2□□□□□ -0.78
HMGXB4-204ENST00000455359 PRR27Q6MZM9 219 aa10.2□□□□□ -0.78
HMGXB4-204ENST00000455359 PTH2Q96A98 100 aa10.2□□□□□ -0.78
HMGXB4-204ENST00000455359 CELA1Q9UNI1 258 aa10.2□□□□□ -0.78
HMGXB4-204ENST00000455359 XKRY2A2RUG3 117 aa10.19□□□□□ -0.78
HMGXB4-204ENST00000455359 LINC00862A6NCI5 91 aa10.19□□□□□ -0.78
HMGXB4-204ENST00000455359 C3orf84H3BNL1 204 aa10.19□□□□□ -0.78
HMGXB4-204ENST00000455359 M0R2P5 195 aa10.19□□□□□ -0.78
HMGXB4-204ENST00000455359 P01737 135 aa10.19□□□□□ -0.78
HMGXB4-204ENST00000455359 S100A4P26447 101 aaKnown RBP10.19□□□□□ -0.78
HMGXB4-204ENST00000455359 NANOS2P60321 138 aaKnown RBP10.19□□□□□ -0.78
HMGXB4-204ENST00000455359 DAD1P61803 113 aa10.19□□□□□ -0.78
HMGXB4-204ENST00000455359 PIK3CD-AS1Q5SR53 167 aa10.19□□□□□ -0.78
HMGXB4-204ENST00000455359 FAM231DQ6ZW35 169 aa10.19□□□□□ -0.78
HMGXB4-204ENST00000455359 LINC01551Q86U37 167 aa10.19□□□□□ -0.78
HMGXB4-204ENST00000455359 RASL10AQ92737 203 aa10.19□□□□□ -0.78
HMGXB4-204ENST00000455359 IL36BQ9NZH7 164 aa10.19□□□□□ -0.78
HMGXB4-204ENST00000455359 NAT8Q9UHE5 227 aa10.19□□□□□ -0.78
HMGXB4-204ENST00000455359 PGPEP1LA6NFU8 196 aa10.18□□□□□ -0.78
HMGXB4-204ENST00000455359 M0R036 132 aa10.18□□□□□ -0.78
HMGXB4-204ENST00000455359 MED14OSP0DP75 135 aa10.18□□□□□ -0.78
HMGXB4-204ENST00000455359 OR5I1Q13606 314 aa10.18□□□□□ -0.78
HMGXB4-204ENST00000455359 C9orf85Q96MD7 179 aa10.18□□□□□ -0.78
HMGXB4-204ENST00000455359 TRAV10A0A0B4J240 114 aa10.17□□□□□ -0.78
HMGXB4-204ENST00000455359 K7EN84 100 aa10.17□□□□□ -0.78
HMGXB4-204ENST00000455359 SFTA3P0C7M3 94 aa10.17□□□□□ -0.78
HMGXB4-204ENST00000455359 TRGV1A0A0A0MS02 117 aa10.16□□□□□ -0.78
HMGXB4-204ENST00000455359 NUPR2A6NF83 97 aa10.16□□□□□ -0.78
HMGXB4-204ENST00000455359 DEFB130BP0DP73 79 aa10.16□□□□□ -0.78
HMGXB4-204ENST00000455359 DEFB130AP0DP74 79 aa10.16□□□□□ -0.78
HMGXB4-204ENST00000455359 RNASE3P12724 160 aaKnown RBP10.16□□□□□ -0.78
HMGXB4-204ENST00000455359 Q6ZTC4 211 aa10.16□□□□□ -0.78
HMGXB4-204ENST00000455359 Q6ZTI0 123 aa10.16□□□□□ -0.78
HMGXB4-204ENST00000455359 ZNF575Q86XF7 245 aa10.16□□□□□ -0.78
HMGXB4-204ENST00000455359 NUDT10Q8NFP7 164 aa10.16□□□□□ -0.78
HMGXB4-204ENST00000455359 OR2D3Q8NGH3 330 aa10.16□□□□□ -0.78
HMGXB4-204ENST00000455359 NUDT11Q96G61 164 aa10.16□□□□□ -0.78
HMGXB4-204ENST00000455359 SCRT2Q9NQ03 307 aa10.16□□□□□ -0.78
HMGXB4-204ENST00000455359 GAGE12BA1L429 117 aa10.15□□□□□ -0.78
HMGXB4-204ENST00000455359 GAGE7O76087 117 aa10.15□□□□□ -0.78
HMGXB4-204ENST00000455359 ATP5G1P05496 136 aa10.15□□□□□ -0.78
HMGXB4-204ENST00000455359 GAGE12FP0CL80 117 aa10.15□□□□□ -0.78
HMGXB4-204ENST00000455359 GAGE12GP0CL81 117 aa10.15□□□□□ -0.78
HMGXB4-204ENST00000455359 GAGE12IP0CL82 117 aa10.15□□□□□ -0.78
HMGXB4-204ENST00000455359 CT83Q5H943 113 aa10.15□□□□□ -0.78
HMGXB4-204ENST00000455359 COMMD7Q86VX2 200 aa10.15□□□□□ -0.78
HMGXB4-204ENST00000455359 PHLDA1Q8WV24 401 aaPredicted RBP10.15□□□□□ -0.78
HMGXB4-204ENST00000455359 FAM210BQ96KR6 192 aa10.15□□□□□ -0.78
HMGXB4-204ENST00000455359 RPP21Q9H633 154 aaKnown RBP10.15□□□□□ -0.78
HMGXB4-204ENST00000455359 DNAH7Q8WXX0 4024 aa10.15□□□□□ -0.79
HMGXB4-204ENST00000455359 TRGV2A0A075B6R0 118 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms