RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 ZNF90Q03938 601 aa2.87□□□□□ -1.95
SBDSP1-204ENST00000453858 BTN1A1Q13410 526 aa2.87□□□□□ -1.95
SBDSP1-204ENST00000453858 C1orf137Q5JT78 98 aa2.87□□□□□ -1.95
SBDSP1-204ENST00000453858 STEAP1BQ6NZ63 245 aa2.87□□□□□ -1.95
SBDSP1-204ENST00000453858 UQCC3Q6UW78 93 aa2.87□□□□□ -1.95
SBDSP1-204ENST00000453858 ARRDC1Q8N5I2 433 aa2.87□□□□□ -1.95
SBDSP1-204ENST00000453858 OR51H1Q8NH63 302 aa2.87□□□□□ -1.95
SBDSP1-204ENST00000453858 DNAJC9Q8WXX5 260 aa2.87□□□□□ -1.95
SBDSP1-204ENST00000453858 RPUSD4Q96CM3 377 aaKnown RBP2.87□□□□□ -1.95
SBDSP1-204ENST00000453858 SMIM19Q96E16 107 aa2.87□□□□□ -1.95
SBDSP1-204ENST00000453858 SEC22AQ96IW7 307 aa2.87□□□□□ -1.95
SBDSP1-204ENST00000453858 PBDC1Q9BVG4 233 aa2.87□□□□□ -1.95
SBDSP1-204ENST00000453858 SAMD10Q9BYL1 202 aa2.87□□□□□ -1.95
SBDSP1-204ENST00000453858 AMBNQ9NP70 447 aa2.87□□□□□ -1.95
SBDSP1-204ENST00000453858 DSTQ03001 7570 aaKnown RBP2.87□□□□□ -1.95
SBDSP1-204ENST00000453858 AHNAK2Q8IVF2 5795 aa2.87□□□□□ -1.95
SBDSP1-204ENST00000453858 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.86□□□□□ -1.95
SBDSP1-204ENST00000453858 PNMA8CA0A1B0GUJ8 204 aa2.86□□□□□ -1.95
SBDSP1-204ENST00000453858 KLLNB2CW77 178 aa2.86□□□□□ -1.95
SBDSP1-204ENST00000453858 TEX46H3BTG2 121 aa2.86□□□□□ -1.95
SBDSP1-204ENST00000453858 HLA-DQA1P01909 254 aa2.86□□□□□ -1.95
SBDSP1-204ENST00000453858 SLC25A4P12235 298 aa2.86□□□□□ -1.95
SBDSP1-204ENST00000453858 SUB1P53999 127 aaKnown RBP eCLIP2.86□□□□□ -1.95
SBDSP1-204ENST00000453858 OR10A3P58181 314 aa2.86□□□□□ -1.95
SBDSP1-204ENST00000453858 ZNF818PQ6ZRF7 136 aa2.86□□□□□ -1.95
SBDSP1-204ENST00000453858 C9orf85Q96MD7 179 aa2.86□□□□□ -1.95
SBDSP1-204ENST00000453858 ODF3Q96PU9 254 aa2.86□□□□□ -1.95
SBDSP1-204ENST00000453858 TSC22D3Q99576 134 aa2.86□□□□□ -1.95
SBDSP1-204ENST00000453858 OR51M1Q9H341 326 aa2.86□□□□□ -1.95
SBDSP1-204ENST00000453858 IGLV10-54A0A075B6I4 117 aa2.85□□□□□ -1.95
SBDSP1-204ENST00000453858 TRBV6-4A0A1B0GX49 114 aa2.85□□□□□ -1.95
SBDSP1-204ENST00000453858 FABP12A6NFH5 140 aa2.85□□□□□ -1.95
SBDSP1-204ENST00000453858 FAM74A7A6NL05 159 aa2.85□□□□□ -1.95
SBDSP1-204ENST00000453858 EDF1O60869 148 aaKnown RBP2.85□□□□□ -1.95
SBDSP1-204ENST00000453858 IGKV1-39P01597 117 aa2.85□□□□□ -1.95
SBDSP1-204ENST00000453858 MT-ND6P03923 174 aa2.85□□□□□ -1.95
SBDSP1-204ENST00000453858 IGKV1D-39P04432 117 aa2.85□□□□□ -1.95
SBDSP1-204ENST00000453858 MT1FP04733 61 aa2.85□□□□□ -1.95
SBDSP1-204ENST00000453858 WNT4P56705 351 aa2.85□□□□□ -1.95
SBDSP1-204ENST00000453858 KRTAP10-12P60413 245 aa2.85□□□□□ -1.95
SBDSP1-204ENST00000453858 POLR2GP62487 172 aaKnown RBP eCLIP2.85□□□□□ -1.95
SBDSP1-204ENST00000453858 CATR1Q13166 79 aa2.85□□□□□ -1.95
SBDSP1-204ENST00000453858 ELOBQ15370 118 aa2.85□□□□□ -1.95
SBDSP1-204ENST00000453858 FAM74A3Q4VXF1 159 aa2.85□□□□□ -1.95
SBDSP1-204ENST00000453858 CNIH2Q6PI25 160 aa2.85□□□□□ -1.95
SBDSP1-204ENST00000453858 KRTAP11-1Q8IUC1 163 aa2.85□□□□□ -1.95
SBDSP1-204ENST00000453858 MRGPRFQ96AM1 343 aa2.85□□□□□ -1.95
SBDSP1-204ENST00000453858 MRPL48Q96GC5 212 aaKnown RBP2.85□□□□□ -1.95
SBDSP1-204ENST00000453858 FAM19A4Q96LR4 140 aa2.85□□□□□ -1.95
SBDSP1-204ENST00000453858 CHCHD7Q9BUK0 85 aa2.85□□□□□ -1.95
SBDSP1-204ENST00000453858 RNF24Q9Y225 148 aa2.85□□□□□ -1.95
SBDSP1-204ENST00000453858 A0A087WWC5 75 aa2.84□□□□□ -1.95
SBDSP1-204ENST00000453858 A0A1W2PNN7 141 aa2.84□□□□□ -1.95
SBDSP1-204ENST00000453858 C7orf71A4D174 169 aa2.84□□□□□ -1.95
SBDSP1-204ENST00000453858 PGLYRP1O75594 196 aaPredicted RBP2.84□□□□□ -1.95
SBDSP1-204ENST00000453858 SLC25A5P05141 298 aaKnown RBP2.84□□□□□ -1.95
SBDSP1-204ENST00000453858 DTYMKP23919 212 aa2.84□□□□□ -1.95
SBDSP1-204ENST00000453858 VAMP3Q15836 100 aa2.84□□□□□ -1.95
SBDSP1-204ENST00000453858 CNPY1Q3B7I2 92 aa2.84□□□□□ -1.95
SBDSP1-204ENST00000453858 LINC00242Q5T6M2 205 aa2.84□□□□□ -1.95
SBDSP1-204ENST00000453858 MEDAGQ5VYS4 303 aa2.84□□□□□ -1.95
SBDSP1-204ENST00000453858 KRTAP5-1Q6L8H4 278 aa2.84□□□□□ -1.95
SBDSP1-204ENST00000453858 DHRSXQ8N5I4 330 aa2.84□□□□□ -1.95
SBDSP1-204ENST00000453858 TRUB1Q8WWH5 349 aaKnown RBP2.84□□□□□ -1.95
SBDSP1-204ENST00000453858 RAB3CQ96E17 227 aa2.84□□□□□ -1.95
SBDSP1-204ENST00000453858 WFDC1Q9HC57 220 aa2.84□□□□□ -1.95
SBDSP1-204ENST00000453858 RPS10P5Q9NQ39 176 aa2.84□□□□□ -1.95
SBDSP1-204ENST00000453858 TMEM56-RWDD3S4R434 201 aa2.84□□□□□ -1.95
SBDSP1-204ENST00000453858 SNRPGP15A8MWD9 76 aa2.83□□□□□ -1.96
SBDSP1-204ENST00000453858 EI24O14681 340 aa2.83□□□□□ -1.96
SBDSP1-204ENST00000453858 MPDU1O75352 247 aa2.83□□□□□ -1.96
SBDSP1-204ENST00000453858 S100A5P33763 92 aa2.83□□□□□ -1.96
SBDSP1-204ENST00000453858 RPS10P46783 165 aaKnown RBP2.83□□□□□ -1.96
SBDSP1-204ENST00000453858 GUK1Q16774 197 aa2.83□□□□□ -1.96
SBDSP1-204ENST00000453858 AADACL3Q5VUY0 350 aa2.83□□□□□ -1.96
SBDSP1-204ENST00000453858 CYB561D1Q8N8Q1 229 aa2.83□□□□□ -1.96
SBDSP1-204ENST00000453858 RNASEH2CQ8TDP1 164 aaKnown RBP2.83□□□□□ -1.96
SBDSP1-204ENST00000453858 SH3BGRL3Q9H299 93 aa2.83□□□□□ -1.96
SBDSP1-204ENST00000453858 SLC25A22Q9H936 323 aa2.83□□□□□ -1.96
SBDSP1-204ENST00000453858 PRR34Q9NV39 138 aa2.83□□□□□ -1.96
SBDSP1-204ENST00000453858 LINC00474Q9P2X8 69 aa2.83□□□□□ -1.96
SBDSP1-204ENST00000453858 AK6Q9Y3D8 172 aaKnown RBP2.83□□□□□ -1.96
SBDSP1-204ENST00000453858 SPRR5A0A1B0GTR4 108 aa2.82□□□□□ -1.96
SBDSP1-204ENST00000453858 FAM24AA6NFZ4 105 aa2.82□□□□□ -1.96
SBDSP1-204ENST00000453858 ZNF253O75346 499 aa2.82□□□□□ -1.96
SBDSP1-204ENST00000453858 PPYP01298 95 aa2.82□□□□□ -1.96
SBDSP1-204ENST00000453858 HIST1H1DP16402 221 aaKnown RBP2.82□□□□□ -1.96
SBDSP1-204ENST00000453858 LEPP41159 167 aa2.82□□□□□ -1.96
SBDSP1-204ENST00000453858 KRTAP10-5P60370 271 aa2.82□□□□□ -1.96
SBDSP1-204ENST00000453858 LYZP61626 148 aa2.82□□□□□ -1.96
SBDSP1-204ENST00000453858 RHOHQ15669 191 aa2.82□□□□□ -1.96
SBDSP1-204ENST00000453858 MIAQ16674 131 aa2.82□□□□□ -1.96
SBDSP1-204ENST00000453858 C2orf83Q53S99 150 aa2.82□□□□□ -1.96
SBDSP1-204ENST00000453858 HACD4Q5VWC8 232 aa2.82□□□□□ -1.96
SBDSP1-204ENST00000453858 C22orf42Q6IC83 251 aa2.82□□□□□ -1.96
SBDSP1-204ENST00000453858 FP248Q71RG6 208 aaPredicted RBP2.82□□□□□ -1.96
SBDSP1-204ENST00000453858 C15orf54Q8N8G6 183 aa2.82□□□□□ -1.96
SBDSP1-204ENST00000453858 OR52I1Q8NGK6 324 aa2.82□□□□□ -1.96
SBDSP1-204ENST00000453858 CENPNQ96H22 339 aaPredicted RBP2.82□□□□□ -1.96
SBDSP1-204ENST00000453858 ACY3Q96HD9 319 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 147.5 ms