RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 C16orf92Q96LL3 132 aa8.12□□□□□ -1.11
PKP4-206ENST00000452162 C20orf173Q96LM9 149 aa8.12□□□□□ -1.11
PKP4-206ENST00000452162 ZNF747Q9BV97 191 aa8.12□□□□□ -1.11
PKP4-206ENST00000452162 TMEM213A2RRL7 107 aa8.11□□□□□ -1.11
PKP4-206ENST00000452162 KLHDC1Q8N7A1 406 aa8.11□□□□□ -1.11
PKP4-206ENST00000452162 FER1L6-AS1Q8NA97 138 aa8.11□□□□□ -1.11
PKP4-206ENST00000452162 M0R2Z0 102 aa8.11□□□□□ -1.11
PKP4-206ENST00000452162 TDRG1Q3Y452 100 aa8.11□□□□□ -1.11
PKP4-206ENST00000452162 TMEM78Q5T7P6 136 aa8.11□□□□□ -1.11
PKP4-206ENST00000452162 IGHV7-4-1A0A0J9YVY3 117 aa8.1□□□□□ -1.11
PKP4-206ENST00000452162 DMRTA1Q5VZB9 504 aa8.1□□□□□ -1.11
PKP4-206ENST00000452162 C11orf44Q8N8P7 122 aa8.1□□□□□ -1.11
PKP4-206ENST00000452162 NDUFAF3Q9BU61 184 aa8.1□□□□□ -1.11
PKP4-206ENST00000452162 PEF1Q9UBV8 284 aaKnown RBP8.1□□□□□ -1.11
PKP4-206ENST00000452162 ORM1P02763 201 aa8.1□□□□□ -1.11
PKP4-206ENST00000452162 HIST1H1AQ02539 215 aaPredicted RBP8.1□□□□□ -1.11
PKP4-206ENST00000452162 EBLN2Q6P2I7 272 aa8.1□□□□□ -1.11
PKP4-206ENST00000452162 C10orf99Q6UWK7 81 aa8.1□□□□□ -1.11
PKP4-206ENST00000452162 C20orf144Q9BQM9 153 aa8.1□□□□□ -1.11
PKP4-206ENST00000452162 C2orf88Q9BSF0 95 aa8.1□□□□□ -1.11
PKP4-206ENST00000452162 CNFNQ9BYD5 112 aa8.1□□□□□ -1.11
PKP4-206ENST00000452162 U3KQK5 164 aa8.1□□□□□ -1.11
PKP4-206ENST00000452162 VWFP04275 2813 aa8.09□□□□□ -1.11
PKP4-206ENST00000452162 IGHV1-24A0A0C4DH33 117 aa8.09□□□□□ -1.11
PKP4-206ENST00000452162 LINC00614P0C842 121 aa8.09□□□□□ -1.11
PKP4-206ENST00000452162 TM4SF20Q53R12 229 aa8.09□□□□□ -1.11
PKP4-206ENST00000452162 FAM104BQ5XKR9 115 aa8.09□□□□□ -1.11
PKP4-206ENST00000452162 ZNF738Q8NE65 137 aa8.09□□□□□ -1.11
PKP4-206ENST00000452162 CITED1Q99966 193 aa8.09□□□□□ -1.11
PKP4-206ENST00000452162 DAZ1Q9NQZ3 744 aaKnown RBP8.09□□□□□ -1.11
PKP4-206ENST00000452162 C11orf21Q9P2W6 132 aa8.09□□□□□ -1.11
PKP4-206ENST00000452162 PKD1L1Q8TDX9 2849 aa8.09□□□□□ -1.12
PKP4-206ENST00000452162 MUC21A0A0G2JKD1 596 aa8.08□□□□□ -1.12
PKP4-206ENST00000452162 MUC21A0A140T8X8 626 aa8.08□□□□□ -1.12
PKP4-206ENST00000452162 C2orf70A6NJV1 201 aa8.08□□□□□ -1.12
PKP4-206ENST00000452162 K7EMT4 169 aa8.08□□□□□ -1.12
PKP4-206ENST00000452162 MUC21Q5SSG8 566 aa8.08□□□□□ -1.12
PKP4-206ENST00000452162 SHISA2Q6UWI4 295 aa8.08□□□□□ -1.12
PKP4-206ENST00000452162 VAMP8Q9BV40 100 aa8.08□□□□□ -1.12
PKP4-206ENST00000452162 RHPN1-AS1Q9BWJ2 59 aa8.08□□□□□ -1.12
PKP4-206ENST00000452162 SMPXQ9UHP9 88 aa8.08□□□□□ -1.12
PKP4-206ENST00000452162 IGKV3D-20A0A0C4DH25 116 aa8.08□□□□□ -1.12
PKP4-206ENST00000452162 PMCHL1Q16048 86 aa8.08□□□□□ -1.12
PKP4-206ENST00000452162 LBHQ53QV2 105 aaPredicted RBP8.08□□□□□ -1.12
PKP4-206ENST00000452162 AMN1Q8IY45 258 aa8.08□□□□□ -1.12
PKP4-206ENST00000452162 LENEPQ9Y5L5 61 aa8.08□□□□□ -1.12
PKP4-206ENST00000452162 OVOL1O14753 267 aa8.07□□□□□ -1.12
PKP4-206ENST00000452162 D6R8Y8 96 aa8.07□□□□□ -1.12
PKP4-206ENST00000452162 CD28P10747 220 aa8.07□□□□□ -1.12
PKP4-206ENST00000452162 EDN2P20800 178 aa8.07□□□□□ -1.12
PKP4-206ENST00000452162 FOXE3Q13461 319 aa8.07□□□□□ -1.12
PKP4-206ENST00000452162 TWIST1Q15672 202 aa8.07□□□□□ -1.12
PKP4-206ENST00000452162 FAM106AQ4KMX7 169 aa8.07□□□□□ -1.12
PKP4-206ENST00000452162 MRPL51Q4U2R6 128 aaKnown RBP8.07□□□□□ -1.12
PKP4-206ENST00000452162 PRR9Q5T870 116 aa8.07□□□□□ -1.12
PKP4-206ENST00000452162 MYOZ3Q8TDC0 251 aa8.07□□□□□ -1.12
PKP4-206ENST00000452162 PAM16Q9Y3D7 125 aa8.07□□□□□ -1.12
PKP4-206ENST00000452162 CMYA5Q8N3K9 4069 aa8.06□□□□□ -1.12
PKP4-206ENST00000452162 LINC00477Q96M19 166 aa8.06□□□□□ -1.12
PKP4-206ENST00000452162 TMEM191AQ9H0A3 160 aa8.06□□□□□ -1.12
PKP4-206ENST00000452162 MSRB1Q9NZV6 116 aa8.06□□□□□ -1.12
PKP4-206ENST00000452162 RPLP1P05386 114 aaKnown RBP8.06□□□□□ -1.12
PKP4-206ENST00000452162 CSN3P07498 182 aa8.06□□□□□ -1.12
PKP4-206ENST00000452162 TCTEX1D4Q5JR98 221 aa8.06□□□□□ -1.12
PKP4-206ENST00000452162 Q6ZQT7 251 aa8.06□□□□□ -1.12
PKP4-206ENST00000452162 LINC00173Q6ZV60 143 aa8.06□□□□□ -1.12
PKP4-206ENST00000452162 SPATA12Q7Z6I5 190 aa8.06□□□□□ -1.12
PKP4-206ENST00000452162 ORMDL3Q8N138 153 aa8.06□□□□□ -1.12
PKP4-206ENST00000452162 OR10J6PQ8NGY7 276 aa8.06□□□□□ -1.12
PKP4-206ENST00000452162 OR5AL1P0C617 328 aa8.05□□□□□ -1.12
PKP4-206ENST00000452162 DEFB1P60022 68 aa8.05□□□□□ -1.12
PKP4-206ENST00000452162 NUTF2P61970 127 aaKnown RBP8.05□□□□□ -1.12
PKP4-206ENST00000452162 ZFAND2AQ8N6M9 145 aa8.05□□□□□ -1.12
PKP4-206ENST00000452162 RNF185Q96GF1 192 aa8.05□□□□□ -1.12
PKP4-206ENST00000452162 FAM19A4Q96LR4 140 aa8.05□□□□□ -1.12
PKP4-206ENST00000452162 PRELID3AQ96N28 172 aa8.05□□□□□ -1.12
PKP4-206ENST00000452162 UFC1Q9Y3C8 167 aa8.05□□□□□ -1.12
PKP4-206ENST00000452162 ELANEP08246 267 aa8.05□□□□□ -1.12
PKP4-206ENST00000452162 RPL11P62913 178 aaKnown RBP8.05□□□□□ -1.12
PKP4-206ENST00000452162 CITED2Q99967 270 aaPredicted RBP8.05□□□□□ -1.12
PKP4-206ENST00000452162 TMEM70Q9BUB7 260 aa8.05□□□□□ -1.12
PKP4-206ENST00000452162 CRXO43186 299 aaPredicted RBP8.04□□□□□ -1.12
PKP4-206ENST00000452162 LEPROTL1O95214 131 aa8.04□□□□□ -1.12
PKP4-206ENST00000452162 RNF152Q8N8N0 203 aa8.04□□□□□ -1.12
PKP4-206ENST00000452162 OR8A1Q8NGG7 326 aa8.04□□□□□ -1.12
PKP4-206ENST00000452162 MIEN1Q9BRT3 115 aa8.04□□□□□ -1.12
PKP4-206ENST00000452162 AP5S1Q9NUS5 200 aa8.04□□□□□ -1.12
PKP4-206ENST00000452162 SIGLEC8Q9NYZ4 499 aa8.04□□□□□ -1.12
PKP4-206ENST00000452162 MGAM2Q2M2H8 2515 aa8.04□□□□□ -1.12
PKP4-206ENST00000452162 LGALS1P09382 135 aaKnown RBP8.04□□□□□ -1.12
PKP4-206ENST00000452162 FA2HQ7L5A8 372 aa8.04□□□□□ -1.12
PKP4-206ENST00000452162 PRSS3P2Q8NHM4 247 aa8.04□□□□□ -1.12
PKP4-206ENST00000452162 SELENOKQ9Y6D0 94 aa8.04□□□□□ -1.12
PKP4-206ENST00000452162 IGKV3-7A0A075B6H7 116 aa8.03□□□□□ -1.12
PKP4-206ENST00000452162 ADARB2-AS1A8MUL3 147 aa8.03□□□□□ -1.12
PKP4-206ENST00000452162 F6UB75 175 aa8.03□□□□□ -1.12
PKP4-206ENST00000452162 SMKR1H3BMG3 65 aa8.03□□□□□ -1.12
PKP4-206ENST00000452162 SNAI2O43623 268 aa8.03□□□□□ -1.12
PKP4-206ENST00000452162 IFI27P40305 119 aaPredicted RBP8.03□□□□□ -1.12
PKP4-206ENST00000452162 SPATA45Q537H7 98 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms