RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 SSBP4Q9BWG4 385 aaPredicted RBP10.59□□□□□ -0.71
USP39-207ENST00000450066 HLA-DRB4X5D2U9 266 aa10.59□□□□□ -0.71
USP39-207ENST00000450066 TEP1Q99973 2627 aaKnown RBP10.59□□□□□ -0.71
USP39-207ENST00000450066 A8MTW9 85 aa10.58□□□□□ -0.72
USP39-207ENST00000450066 IGKV3-20P01619 116 aa10.58□□□□□ -0.72
USP39-207ENST00000450066 IGLV1-51P01701 117 aa10.58□□□□□ -0.72
USP39-207ENST00000450066 GATD1Q8NB37 220 aa10.58□□□□□ -0.72
USP39-207ENST00000450066 CITED1Q99966 193 aa10.58□□□□□ -0.72
USP39-207ENST00000450066 CNFNQ9BYD5 112 aa10.58□□□□□ -0.72
USP39-207ENST00000450066 ATRQ13535 2644 aa10.58□□□□□ -0.72
USP39-207ENST00000450066 KNCNA6PVL3 124 aa10.57□□□□□ -0.72
USP39-207ENST00000450066 CDKN1BP46527 198 aa10.57□□□□□ -0.72
USP39-207ENST00000450066 AMTNQ6UX39 209 aa10.57□□□□□ -0.72
USP39-207ENST00000450066 LINC00482Q8N8I6 264 aa10.57□□□□□ -0.72
USP39-207ENST00000450066 OR2K2Q8NGT1 345 aa10.57□□□□□ -0.72
USP39-207ENST00000450066 C7orf71A4D174 169 aa10.57□□□□□ -0.72
USP39-207ENST00000450066 H3BMM0 161 aa10.57□□□□□ -0.72
USP39-207ENST00000450066 KIAA1644Q3SXP7 199 aa10.57□□□□□ -0.72
USP39-207ENST00000450066 NAGKQ9UJ70 344 aa10.57□□□□□ -0.72
USP39-207ENST00000450066 VWFP04275 2813 aa10.56□□□□□ -0.72
USP39-207ENST00000450066 ZNF493Q6ZR52 646 aa10.56□□□□□ -0.72
USP39-207ENST00000450066 M0R2Z0 102 aa10.56□□□□□ -0.72
USP39-207ENST00000450066 ZNF324O75467 553 aaPredicted RBP10.56□□□□□ -0.72
USP39-207ENST00000450066 OR5AL1P0C617 328 aa10.56□□□□□ -0.72
USP39-207ENST00000450066 ODF3L2Q3SX64 289 aa10.56□□□□□ -0.72
USP39-207ENST00000450066 ANXA2RQ3ZCQ2 193 aa10.56□□□□□ -0.72
USP39-207ENST00000450066 GFI1BQ5VTD9 330 aa10.56□□□□□ -0.72
USP39-207ENST00000450066 MUC21A0A0G2JKD1 596 aa10.55□□□□□ -0.72
USP39-207ENST00000450066 MUC21A0A140T8X8 626 aa10.55□□□□□ -0.72
USP39-207ENST00000450066 NTF3P20783 257 aa10.55□□□□□ -0.72
USP39-207ENST00000450066 ZNF124Q15973 351 aa10.55□□□□□ -0.72
USP39-207ENST00000450066 SPINK13Q1W4C9 94 aa10.55□□□□□ -0.72
USP39-207ENST00000450066 MUC21Q5SSG8 566 aa10.55□□□□□ -0.72
USP39-207ENST00000450066 TRAV12-3A0A0B4J271 114 aa10.54□□□□□ -0.72
USP39-207ENST00000450066 SNAI2O43623 268 aa10.54□□□□□ -0.72
USP39-207ENST00000450066 SRIP30626 198 aa10.54□□□□□ -0.72
USP39-207ENST00000450066 CMC4P56277 68 aaPredicted RBP10.54□□□□□ -0.72
USP39-207ENST00000450066 Q0VG73 95 aa10.54□□□□□ -0.72
USP39-207ENST00000450066 TWIST1Q15672 202 aa10.54□□□□□ -0.72
USP39-207ENST00000450066 HIST3H2BBQ8N257 126 aa10.54□□□□□ -0.72
USP39-207ENST00000450066 AGRNO00468 2067 aa10.54□□□□□ -0.72
USP39-207ENST00000450066 TRAV12-2A0A075B6T6 113 aa10.54□□□□□ -0.72
USP39-207ENST00000450066 LOC102724200A0A096LPH7 203 aaPredicted RBP10.54□□□□□ -0.72
USP39-207ENST00000450066 OR11H12B2RN74 326 aa10.54□□□□□ -0.72
USP39-207ENST00000450066 DNLZQ5SXM8 178 aa10.54□□□□□ -0.72
USP39-207ENST00000450066 FAM159AQ6UWV7 190 aa10.54□□□□□ -0.72
USP39-207ENST00000450066 KCNS1Q96KK3 526 aa10.54□□□□□ -0.72
USP39-207ENST00000450066 CLUHP3Q96NS8 147 aa10.54□□□□□ -0.72
USP39-207ENST00000450066 ASIPP42127 132 aa10.53□□□□□ -0.72
USP39-207ENST00000450066 SSTP61278 116 aa10.53□□□□□ -0.72
USP39-207ENST00000450066 TDRG1Q3Y452 100 aa10.53□□□□□ -0.72
USP39-207ENST00000450066 OR10J3Q5JRS4 329 aa10.53□□□□□ -0.72
USP39-207ENST00000450066 ALKBH7Q9BT30 221 aaPredicted RBP10.53□□□□□ -0.72
USP39-207ENST00000450066 MAST4O15021 2626 aa10.53□□□□□ -0.72
USP39-207ENST00000450066 IGHV4-4A0A075B6R2 117 aa10.53□□□□□ -0.72
USP39-207ENST00000450066 MED14OSP0DP75 135 aa10.53□□□□□ -0.72
USP39-207ENST00000450066 PRR31Q5SQ13 230 aa10.53□□□□□ -0.72
USP39-207ENST00000450066 FAM110AQ9BQ89 295 aa10.53□□□□□ -0.72
USP39-207ENST00000450066 RBMY1BA6NDE4 496 aaKnown RBP10.52□□□□□ -0.73
USP39-207ENST00000450066 RBMY1EA6NEQ0 496 aaKnown RBP10.52□□□□□ -0.73
USP39-207ENST00000450066 IFITM10A6NMD0 228 aa10.52□□□□□ -0.73
USP39-207ENST00000450066 H3BVH4 76 aa10.52□□□□□ -0.73
USP39-207ENST00000450066 RBMY1DP0C7P1 496 aaKnown RBP10.52□□□□□ -0.73
USP39-207ENST00000450066 S100A4P26447 101 aaKnown RBP10.52□□□□□ -0.73
USP39-207ENST00000450066 CACNG7P62955 275 aa10.52□□□□□ -0.73
USP39-207ENST00000450066 BEAN1Q3B7T3 259 aa10.52□□□□□ -0.73
USP39-207ENST00000450066 OR10AG1Q8NH19 301 aa10.52□□□□□ -0.73
USP39-207ENST00000450066 MSRB1Q9NZV6 116 aa10.52□□□□□ -0.73
USP39-207ENST00000450066 GNRH2O43555 120 aa10.51□□□□□ -0.73
USP39-207ENST00000450066 AKR1D1P51857 326 aa10.51□□□□□ -0.73
USP39-207ENST00000450066 PDZD11Q5EBL8 140 aa10.51□□□□□ -0.73
USP39-207ENST00000450066 BAGE3Q86Y29 109 aa10.51□□□□□ -0.73
USP39-207ENST00000450066 TMEM191AQ9H0A3 160 aa10.51□□□□□ -0.73
USP39-207ENST00000450066 TP53TG3Q9ULZ0 132 aa10.51□□□□□ -0.73
USP39-207ENST00000450066 CRXO43186 299 aaPredicted RBP10.51□□□□□ -0.73
USP39-207ENST00000450066 INSL3P51460 131 aa10.51□□□□□ -0.73
USP39-207ENST00000450066 FAM104BQ5XKR9 115 aa10.51□□□□□ -0.73
USP39-207ENST00000450066 TMEM256Q8N2U0 113 aa10.51□□□□□ -0.73
USP39-207ENST00000450066 SCRT2Q9NQ03 307 aa10.51□□□□□ -0.73
USP39-207ENST00000450066 S100A2P29034 98 aa10.5□□□□□ -0.73
USP39-207ENST00000450066 SPANXN1Q5VSR9 72 aa10.5□□□□□ -0.73
USP39-207ENST00000450066 DMRTA1Q5VZB9 504 aa10.5□□□□□ -0.73
USP39-207ENST00000450066 STHQ8IWL8 128 aa10.5□□□□□ -0.73
USP39-207ENST00000450066 C18orf32Q8TCD1 76 aa10.5□□□□□ -0.73
USP39-207ENST00000450066 RNASE3P12724 160 aaKnown RBP10.49□□□□□ -0.73
USP39-207ENST00000450066 FXYD7P58549 80 aa10.49□□□□□ -0.73
USP39-207ENST00000450066 KRTAP24-1Q3LI83 254 aa10.49□□□□□ -0.73
USP39-207ENST00000450066 IGHV1OR15-1A0A075B7D0 117 aa10.49□□□□□ -0.73
USP39-207ENST00000450066 CD7P09564 240 aa10.49□□□□□ -0.73
USP39-207ENST00000450066 ESDP10768 282 aa10.49□□□□□ -0.73
USP39-207ENST00000450066 AMN1Q8IY45 258 aa10.49□□□□□ -0.73
USP39-207ENST00000450066 PHLDA3Q9Y5J5 127 aa10.49□□□□□ -0.73
USP39-207ENST00000450066 TIMM8BQ9Y5J9 83 aaPredicted RBP10.49□□□□□ -0.73
USP39-207ENST00000450066 FBN1P35555 2871 aaKnown RBP10.49□□□□□ -0.73
USP39-207ENST00000450066 SERF1AO75920 110 aa10.48□□□□□ -0.73
USP39-207ENST00000450066 LINC00310P59036 64 aa10.48□□□□□ -0.73
USP39-207ENST00000450066 TRPT1Q86TN4 253 aaKnown RBP10.48□□□□□ -0.73
USP39-207ENST00000450066 HIST1H2BLQ99880 126 aa10.48□□□□□ -0.73
USP39-207ENST00000450066 NUPR1O60356 82 aa10.48□□□□□ -0.73
USP39-207ENST00000450066 C9orf66Q5T8R8 295 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 221.4 ms