RNA–Protein interactions for RNA: ENST00000446921.6

SIK3-205, Transcript of SIK family kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIK3, Length 3,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-205ENST00000446921 ZNF22P17026 224 aaPredicted RBP12.35□□□□□ -0.43
SIK3-205ENST00000446921 RPS28P62857 69 aaKnown RBP12.35□□□□□ -0.43
SIK3-205ENST00000446921 TPSG1Q9NRR2 321 aa12.35□□□□□ -0.43
SIK3-205ENST00000446921 BAALCQ8WXS3 180 aa12.35□□□□□ -0.43
SIK3-205ENST00000446921 IMMP1LQ96LU5 166 aa12.35□□□□□ -0.43
SIK3-205ENST00000446921 PTPRBP23467 1997 aa12.35□□□□□ -0.43
SIK3-205ENST00000446921 ZNF785A8K8V0 405 aa12.35□□□□□ -0.43
SIK3-205ENST00000446921 NPC2P61916 151 aa12.35□□□□□ -0.43
SIK3-205ENST00000446921 PAX8Q06710 450 aa12.35□□□□□ -0.43
SIK3-205ENST00000446921 EEF1AKMT3Q96AZ1 226 aa12.35□□□□□ -0.43
SIK3-205ENST00000446921 RITA1Q96K30 269 aa12.35□□□□□ -0.43
SIK3-205ENST00000446921 FSTL3O95633 263 aa12.34□□□□□ -0.43
SIK3-205ENST00000446921 TNFAIP6P98066 277 aaPredicted RBP12.34□□□□□ -0.43
SIK3-205ENST00000446921 C17orf58Q2M2W7 97 aa12.34□□□□□ -0.43
SIK3-205ENST00000446921 Q6ZS46 218 aa12.34□□□□□ -0.43
SIK3-205ENST00000446921 RNF185Q96GF1 192 aa12.34□□□□□ -0.43
SIK3-205ENST00000446921 PCSK5Q92824 1860 aa12.34□□□□□ -0.43
SIK3-205ENST00000446921 IGHV3-35A0A0C4DH35 117 aa12.34□□□□□ -0.43
SIK3-205ENST00000446921 TRGV3P03979 118 aa12.34□□□□□ -0.43
SIK3-205ENST00000446921 S100A4P26447 101 aaKnown RBP12.34□□□□□ -0.43
SIK3-205ENST00000446921 FAM216BQ8N7L0 139 aa12.34□□□□□ -0.43
SIK3-205ENST00000446921 IGKV3D-15A0A087WSY6 115 aa12.33□□□□□ -0.44
SIK3-205ENST00000446921 M0R381 172 aa12.33□□□□□ -0.44
SIK3-205ENST00000446921 SLC25A45Q8N413 288 aa12.33□□□□□ -0.44
SIK3-205ENST00000446921 NUP37Q8NFH4 326 aa12.33□□□□□ -0.44
SIK3-205ENST00000446921 PKDREJQ9NTG1 2253 aa12.33□□□□□ -0.44
SIK3-205ENST00000446921 INS-IGF2F8WCM5 200 aa12.33□□□□□ -0.44
SIK3-205ENST00000446921 C2orf66Q6UXQ4 117 aa12.33□□□□□ -0.44
SIK3-205ENST00000446921 ZNRF2Q8NHG8 242 aa12.33□□□□□ -0.44
SIK3-205ENST00000446921 DPH3Q96FX2 82 aa12.33□□□□□ -0.44
SIK3-205ENST00000446921 TRBV10-2A0A0K0K1G8 114 aa12.33□□□□□ -0.44
SIK3-205ENST00000446921 SYNJ2BPP57105 145 aa12.32□□□□□ -0.44
SIK3-205ENST00000446921 TMEM258P61165 79 aa12.32□□□□□ -0.44
SIK3-205ENST00000446921 ORMDL2Q53FV1 153 aa12.32□□□□□ -0.44
SIK3-205ENST00000446921 SPRNQ5BIV9 151 aa12.32□□□□□ -0.44
SIK3-205ENST00000446921 CELSR3Q9NYQ7 3312 aa12.32□□□□□ -0.44
SIK3-205ENST00000446921 ATOX1O00244 68 aa12.32□□□□□ -0.44
SIK3-205ENST00000446921 OVOL1O14753 267 aa12.32□□□□□ -0.44
SIK3-205ENST00000446921 LY6DQ14210 128 aa12.32□□□□□ -0.44
SIK3-205ENST00000446921 LAMA1P25391 3075 aa12.32□□□□□ -0.44
SIK3-205ENST00000446921 FREM2Q5SZK8 3169 aa12.31□□□□□ -0.44
SIK3-205ENST00000446921 A0A0J9YY99 117 aa12.31□□□□□ -0.44
SIK3-205ENST00000446921 CIRBPQ14011 172 aaKnown RBP12.31□□□□□ -0.44
SIK3-205ENST00000446921 PYGO1Q9Y3Y4 419 aa12.31□□□□□ -0.44
SIK3-205ENST00000446921 IGHV1OR15-9A0A0B4J2B8 117 aa12.31□□□□□ -0.44
SIK3-205ENST00000446921 IGHV5-10-1A0A0J9YXX1 117 aa12.31□□□□□ -0.44
SIK3-205ENST00000446921 SPRY2O43597 315 aa12.31□□□□□ -0.44
SIK3-205ENST00000446921 CCL3L1P16619 93 aa12.31□□□□□ -0.44
SIK3-205ENST00000446921 C17orf82Q86X59 251 aaPredicted RBP12.31□□□□□ -0.44
SIK3-205ENST00000446921 TMEM167AQ8TBQ9 72 aa12.31□□□□□ -0.44
SIK3-205ENST00000446921 TRAV17A0A0B4J275 112 aa12.31□□□□□ -0.44
SIK3-205ENST00000446921 K7EM74 188 aa12.31□□□□□ -0.44
SIK3-205ENST00000446921 ZNF80P51504 273 aaPredicted RBP12.31□□□□□ -0.44
SIK3-205ENST00000446921 SBSPONQ8IVN8 264 aa12.31□□□□□ -0.44
SIK3-205ENST00000446921 A0A1W2PRX2 142 aa12.3□□□□□ -0.44
SIK3-205ENST00000446921 CCL4P13236 92 aa12.3□□□□□ -0.44
SIK3-205ENST00000446921 PRB3Q04118 309 aaPredicted RBP12.3□□□□□ -0.44
SIK3-205ENST00000446921 ERCC8Q13216 396 aa12.3□□□□□ -0.44
SIK3-205ENST00000446921 LRP4O75096 1905 aa12.3□□□□□ -0.44
SIK3-205ENST00000446921 MRPL14Q6P1L8 145 aaKnown RBP12.3□□□□□ -0.44
SIK3-205ENST00000446921 IGHG4P01861 327 aa12.29□□□□□ -0.44
SIK3-205ENST00000446921 SRRM5B3KS81 715 aa12.29□□□□□ -0.44
SIK3-205ENST00000446921 IGHV3-33P01772 117 aa12.29□□□□□ -0.44
SIK3-205ENST00000446921 LINC01619G3V211 115 aa12.29□□□□□ -0.44
SIK3-205ENST00000446921 PEMTQ9UBM1 199 aa12.29□□□□□ -0.44
SIK3-205ENST00000446921 LINC00336Q6ZUF6 198 aa12.28□□□□□ -0.44
SIK3-205ENST00000446921 MUSTN1Q8IVN3 82 aa12.28□□□□□ -0.44
SIK3-205ENST00000446921 CLEC2BQ92478 149 aa12.28□□□□□ -0.44
SIK3-205ENST00000446921 SMIM2Q9BVW6 85 aa12.28□□□□□ -0.44
SIK3-205ENST00000446921 RETNQ9HD89 108 aa12.28□□□□□ -0.44
SIK3-205ENST00000446921 SHANK2-AS3Q9BTD1 123 aa12.28□□□□□ -0.44
SIK3-205ENST00000446921 SIRPDQ9H106 197 aa12.28□□□□□ -0.44
SIK3-205ENST00000446921 TMEM14CQ9P0S9 112 aa12.28□□□□□ -0.44
SIK3-205ENST00000446921 C11orf86A6NJI1 115 aa12.27□□□□□ -0.44
SIK3-205ENST00000446921 SPANXDQ9BXN6 97 aa12.27□□□□□ -0.44
SIK3-205ENST00000446921 ARHGAP32A7KAX9 2087 aa12.27□□□□□ -0.44
SIK3-205ENST00000446921 AKAP6Q13023 2319 aa12.27□□□□□ -0.44
SIK3-205ENST00000446921 ZNF71Q9NQZ8 489 aaPredicted RBP12.27□□□□□ -0.45
SIK3-205ENST00000446921 IGHV3-30P01768 117 aa12.27□□□□□ -0.45
SIK3-205ENST00000446921 IGHV3-30-5P0DP03 117 aa12.27□□□□□ -0.45
SIK3-205ENST00000446921 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.26□□□□□ -0.45
SIK3-205ENST00000446921 CACNA1EQ15878 2313 aa12.26□□□□□ -0.45
SIK3-205ENST00000446921 TRAV12-1A0A0B4J245 112 aa12.26□□□□□ -0.45
SIK3-205ENST00000446921 F5H697 171 aa12.26□□□□□ -0.45
SIK3-205ENST00000446921 ELANEP08246 267 aa12.26□□□□□ -0.45
SIK3-205ENST00000446921 HIST1H4AP62805 103 aaKnown RBP12.26□□□□□ -0.45
SIK3-205ENST00000446921 RHOHQ15669 191 aa12.26□□□□□ -0.45
SIK3-205ENST00000446921 IGHV3OR16-13A0A075B7E8 117 aa12.26□□□□□ -0.45
SIK3-205ENST00000446921 IGHV3-74A0A0B4J1X5 117 aa12.26□□□□□ -0.45
SIK3-205ENST00000446921 ADARB2-AS1A8MUL3 147 aa12.26□□□□□ -0.45
SIK3-205ENST00000446921 J3QQQ9 107 aa12.26□□□□□ -0.45
SIK3-205ENST00000446921 IGHV3-23P01764 117 aa12.26□□□□□ -0.45
SIK3-205ENST00000446921 LYPD1Q8N2G4 141 aa12.26□□□□□ -0.45
SIK3-205ENST00000446921 ATP5G1P05496 136 aa12.25□□□□□ -0.45
SIK3-205ENST00000446921 OVOL3O00110 214 aa12.25□□□□□ -0.45
SIK3-205ENST00000446921 LINC00643Q86TS7 51 aa12.25□□□□□ -0.45
SIK3-205ENST00000446921 DOPEY2Q9Y3R5 2298 aa12.25□□□□□ -0.45
SIK3-205ENST00000446921 METTL26Q96S19 204 aa12.25□□□□□ -0.45
SIK3-205ENST00000446921 SPTBN1Q01082 2364 aaKnown RBP12.25□□□□□ -0.45
SIK3-205ENST00000446921 SUMO2P61956 95 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms