RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 UQCC3Q6UW78 93 aa9.77□□□□□ -0.85
TM9SF4-204ENST00000442842 OCC1Q8TAD7 63 aa9.77□□□□□ -0.85
TM9SF4-204ENST00000442842 TMEM263Q8WUH6 116 aaKnown RBP9.77□□□□□ -0.85
TM9SF4-204ENST00000442842 DAZAP1Q96EP5 407 aaKnown RBP9.77□□□□□ -0.85
TM9SF4-204ENST00000442842 TRGV11A0A075B6L2 103 aa9.76□□□□□ -0.85
TM9SF4-204ENST00000442842 RPL19P84098 196 aaKnown RBP9.76□□□□□ -0.85
TM9SF4-204ENST00000442842 ZNF415Q09FC8 603 aa9.76□□□□□ -0.85
TM9SF4-204ENST00000442842 ADIRFQ15847 76 aa9.76□□□□□ -0.85
TM9SF4-204ENST00000442842 RNASE8Q8TDE3 154 aaKnown RBP9.76□□□□□ -0.85
TM9SF4-204ENST00000442842 KCNS1Q96KK3 526 aa9.76□□□□□ -0.85
TM9SF4-204ENST00000442842 LINC00467Q9BRT7 94 aa9.76□□□□□ -0.85
TM9SF4-204ENST00000442842 C11orf68Q9H3H3 251 aaKnown RBP9.76□□□□□ -0.85
TM9SF4-204ENST00000442842 BIN3Q9NQY0 253 aa9.76□□□□□ -0.85
TM9SF4-204ENST00000442842 NAT8Q9UHE5 227 aa9.76□□□□□ -0.85
TM9SF4-204ENST00000442842 TIMM8BQ9Y5J9 83 aaPredicted RBP9.76□□□□□ -0.85
TM9SF4-204ENST00000442842 IGKV3D-20A0A0C4DH25 116 aa9.75□□□□□ -0.85
TM9SF4-204ENST00000442842 SNURFLB1AK76 121 aa9.75□□□□□ -0.85
TM9SF4-204ENST00000442842 GNRH2O43555 120 aa9.75□□□□□ -0.85
TM9SF4-204ENST00000442842 TMEM241Q24JQ0 296 aa9.75□□□□□ -0.85
TM9SF4-204ENST00000442842 LINC01551Q86U37 167 aa9.75□□□□□ -0.85
TM9SF4-204ENST00000442842 RNASE7Q9H1E1 156 aaKnown RBP9.75□□□□□ -0.85
TM9SF4-204ENST00000442842 GSN-AS1Q9NRJ2 163 aa9.75□□□□□ -0.85
TM9SF4-204ENST00000442842 GRIFINA4D1Z8 144 aa9.74□□□□□ -0.85
TM9SF4-204ENST00000442842 TMEM189A5PLL7 270 aa9.74□□□□□ -0.85
TM9SF4-204ENST00000442842 KRBOX1C9JBD0 128 aa9.74□□□□□ -0.85
TM9SF4-204ENST00000442842 P01737 135 aa9.74□□□□□ -0.85
TM9SF4-204ENST00000442842 RPL23P62829 140 aaKnown RBP9.74□□□□□ -0.85
TM9SF4-204ENST00000442842 TDRG1Q3Y452 100 aa9.74□□□□□ -0.85
TM9SF4-204ENST00000442842 LINC01559Q495D7 138 aa9.74□□□□□ -0.85
TM9SF4-204ENST00000442842 ZNF493Q6ZR52 646 aa9.74□□□□□ -0.85
TM9SF4-204ENST00000442842 MDFICQ9P1T7 246 aa9.74□□□□□ -0.85
TM9SF4-204ENST00000442842 CELA1Q9UNI1 258 aa9.74□□□□□ -0.85
TM9SF4-204ENST00000442842 LY96Q9Y6Y9 160 aa9.74□□□□□ -0.85
TM9SF4-204ENST00000442842 NBEAL2Q6ZNJ1 2754 aa9.74□□□□□ -0.85
TM9SF4-204ENST00000442842 PLAC8L1A1L4L8 177 aa9.73□□□□□ -0.85
TM9SF4-204ENST00000442842 TMEM218A2RU14 115 aa9.73□□□□□ -0.85
TM9SF4-204ENST00000442842 C19orf71A6NCJ1 209 aa9.73□□□□□ -0.85
TM9SF4-204ENST00000442842 F8W036 122 aa9.73□□□□□ -0.85
TM9SF4-204ENST00000442842 S100A4P26447 101 aaKnown RBP9.73□□□□□ -0.85
TM9SF4-204ENST00000442842 ASIPP42127 132 aa9.73□□□□□ -0.85
TM9SF4-204ENST00000442842 ERVFC1-1P60608 527 aa9.73□□□□□ -0.85
TM9SF4-204ENST00000442842 IBA57Q5T440 356 aaKnown RBP9.73□□□□□ -0.85
TM9SF4-204ENST00000442842 FAM222AQ5U5X8 452 aa9.73□□□□□ -0.85
TM9SF4-204ENST00000442842 C11orf72Q8NBR9 251 aa9.73□□□□□ -0.85
TM9SF4-204ENST00000442842 OR2D3Q8NGH3 330 aa9.73□□□□□ -0.85
TM9SF4-204ENST00000442842 NOP10Q9NPE3 64 aaKnown RBP9.73□□□□□ -0.85
TM9SF4-204ENST00000442842 COL7A1Q02388 2944 aa9.73□□□□□ -0.85
TM9SF4-204ENST00000442842 IGHV3-16A0A0C4DH30 117 aa9.72□□□□□ -0.85
TM9SF4-204ENST00000442842 H3BVH4 76 aa9.72□□□□□ -0.85
TM9SF4-204ENST00000442842 ADCYAP1P18509 176 aa9.72□□□□□ -0.85
TM9SF4-204ENST00000442842 TCL1AP56279 114 aa9.72□□□□□ -0.85
TM9SF4-204ENST00000442842 RPP21Q9H633 154 aaKnown RBP9.72□□□□□ -0.85
TM9SF4-204ENST00000442842 CXorf65A6NEN9 183 aa9.71□□□□□ -0.86
TM9SF4-204ENST00000442842 GATCO43716 136 aaKnown RBP9.71□□□□□ -0.86
TM9SF4-204ENST00000442842 GZMBP10144 247 aa9.71□□□□□ -0.86
TM9SF4-204ENST00000442842 NUDT10Q8NFP7 164 aa9.71□□□□□ -0.86
TM9SF4-204ENST00000442842 ISOC2Q96AB3 205 aa9.71□□□□□ -0.86
TM9SF4-204ENST00000442842 NUDT11Q96G61 164 aa9.71□□□□□ -0.86
TM9SF4-204ENST00000442842 MRPL16Q9NX20 251 aaKnown RBP9.71□□□□□ -0.86
TM9SF4-204ENST00000442842 TRGV1A0A0A0MS02 117 aa9.7□□□□□ -0.86
TM9SF4-204ENST00000442842 SPART-AS1P0CW21 52 aa9.7□□□□□ -0.86
TM9SF4-204ENST00000442842 DEFB130BP0DP73 79 aa9.7□□□□□ -0.86
TM9SF4-204ENST00000442842 DEFB130AP0DP74 79 aa9.7□□□□□ -0.86
TM9SF4-204ENST00000442842 NANOS2P60321 138 aaKnown RBP9.7□□□□□ -0.86
TM9SF4-204ENST00000442842 IL17DQ8TAD2 202 aa9.7□□□□□ -0.86
TM9SF4-204ENST00000442842 C11orf45Q8TAV5 145 aa9.7□□□□□ -0.86
TM9SF4-204ENST00000442842 TPPP3Q9BW30 176 aa9.7□□□□□ -0.86
TM9SF4-204ENST00000442842 EDA2RQ9HAV5 297 aa9.7□□□□□ -0.86
TM9SF4-204ENST00000442842 DKK2Q9UBU2 259 aa9.7□□□□□ -0.86
TM9SF4-204ENST00000442842 TEX48A0A1B0GUV7 120 aa9.69□□□□□ -0.86
TM9SF4-204ENST00000442842 GAGE12BA1L429 117 aa9.69□□□□□ -0.86
TM9SF4-204ENST00000442842 LYRM9A8MSI8 78 aa9.69□□□□□ -0.86
TM9SF4-204ENST00000442842 GAGE7O76087 117 aa9.69□□□□□ -0.86
TM9SF4-204ENST00000442842 GAGE12FP0CL80 117 aa9.69□□□□□ -0.86
TM9SF4-204ENST00000442842 GAGE12GP0CL81 117 aa9.69□□□□□ -0.86
TM9SF4-204ENST00000442842 GAGE12IP0CL82 117 aa9.69□□□□□ -0.86
TM9SF4-204ENST00000442842 RNASE3P12724 160 aaKnown RBP9.69□□□□□ -0.86
TM9SF4-204ENST00000442842 FAM231DQ6ZW35 169 aa9.69□□□□□ -0.86
TM9SF4-204ENST00000442842 SLC7A5P1Q8MH63 180 aa9.69□□□□□ -0.86
TM9SF4-204ENST00000442842 C15orf54Q8N8G6 183 aa9.69□□□□□ -0.86
TM9SF4-204ENST00000442842 SFRP2Q96HF1 295 aa9.69□□□□□ -0.86
TM9SF4-204ENST00000442842 TENM3Q9P273 2699 aa9.69□□□□□ -0.86
TM9SF4-204ENST00000442842 XKRY2A2RUG3 117 aa9.68□□□□□ -0.86
TM9SF4-204ENST00000442842 ARMS2P0C7Q2 107 aa9.68□□□□□ -0.86
TM9SF4-204ENST00000442842 RPS20P60866 119 aaKnown RBP9.68□□□□□ -0.86
TM9SF4-204ENST00000442842 DAD1P61803 113 aa9.68□□□□□ -0.86
TM9SF4-204ENST00000442842 DAZ2Q13117 558 aaKnown RBP9.68□□□□□ -0.86
TM9SF4-204ENST00000442842 Q6ZTI0 123 aa9.68□□□□□ -0.86
TM9SF4-204ENST00000442842 C9orf85Q96MD7 179 aa9.68□□□□□ -0.86
TM9SF4-204ENST00000442842 SPXQ9BT56 116 aa9.68□□□□□ -0.86
TM9SF4-204ENST00000442842 CXCL1P09341 107 aa9.67□□□□□ -0.86
TM9SF4-204ENST00000442842 HTN3P15516 51 aa9.67□□□□□ -0.86
TM9SF4-204ENST00000442842 PNRC1Q12796 327 aaPredicted RBP9.67□□□□□ -0.86
TM9SF4-204ENST00000442842 Q6ZTC4 211 aa9.67□□□□□ -0.86
TM9SF4-204ENST00000442842 OR10G8Q8NGN5 311 aa9.67□□□□□ -0.86
TM9SF4-204ENST00000442842 SEC11CQ9BY50 192 aa9.67□□□□□ -0.86
TM9SF4-204ENST00000442842 OSTCQ9NRP0 149 aa9.67□□□□□ -0.86
TM9SF4-204ENST00000442842 TRGV2A0A075B6R0 118 aa9.66□□□□□ -0.86
TM9SF4-204ENST00000442842 MUC21A0A0G2JKD1 596 aa9.66□□□□□ -0.86
TM9SF4-204ENST00000442842 MUC21A0A140T8X8 626 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms