RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 SIGLEC15Q6ZMC9 328 aa5.61□□□□□ -1.51
CDC42BPA-208ENST00000442054 ZNF705AQ6ZN79 300 aaPredicted RBP5.61□□□□□ -1.51
CDC42BPA-208ENST00000442054 ZNF493Q6ZR52 646 aa5.61□□□□□ -1.51
CDC42BPA-208ENST00000442054 ZNF738Q8NE65 137 aa5.61□□□□□ -1.51
CDC42BPA-208ENST00000442054 ORAOV1Q8WV07 137 aa5.61□□□□□ -1.51
CDC42BPA-208ENST00000442054 LAMTOR2Q9Y2Q5 125 aa5.61□□□□□ -1.51
CDC42BPA-208ENST00000442054 LOC102724200A0A096LPH7 203 aaPredicted RBP5.6□□□□□ -1.51
CDC42BPA-208ENST00000442054 PPBPP02775 128 aa5.6□□□□□ -1.51
CDC42BPA-208ENST00000442054 NBEAP1P0C6P0 100 aa5.6□□□□□ -1.51
CDC42BPA-208ENST00000442054 KRTDAPP60985 99 aa5.6□□□□□ -1.51
CDC42BPA-208ENST00000442054 LINC01559Q495D7 138 aa5.6□□□□□ -1.51
CDC42BPA-208ENST00000442054 AAMDCQ9H7C9 122 aa5.6□□□□□ -1.51
CDC42BPA-208ENST00000442054 HIGD1AQ9Y241 93 aa5.6□□□□□ -1.51
CDC42BPA-208ENST00000442054 HSBP1L1C9JCN9 74 aa5.6□□□□□ -1.51
CDC42BPA-208ENST00000442054 H3BRN7 92 aa5.6□□□□□ -1.51
CDC42BPA-208ENST00000442054 NDUFA4O00483 81 aa5.6□□□□□ -1.51
CDC42BPA-208ENST00000442054 PPIFP30405 207 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-208ENST00000442054 C5orf17Q8NAS9 161 aa5.6□□□□□ -1.51
CDC42BPA-208ENST00000442054 TMEM190Q8WZ59 177 aa5.6□□□□□ -1.51
CDC42BPA-208ENST00000442054 CHCHD1Q96BP2 118 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-208ENST00000442054 Q9H3A6 140 aa5.6□□□□□ -1.51
CDC42BPA-208ENST00000442054 SCRT2Q9NQ03 307 aa5.6□□□□□ -1.51
CDC42BPA-208ENST00000442054 GOLT1BQ9Y3E0 138 aa5.6□□□□□ -1.51
CDC42BPA-208ENST00000442054 HIST1H1EP10412 219 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-208ENST00000442054 FGF6P10767 208 aa5.6□□□□□ -1.51
CDC42BPA-208ENST00000442054 LEMD1Q68G75 181 aa5.6□□□□□ -1.51
CDC42BPA-208ENST00000442054 TMEM75Q8N9X5 138 aa5.6□□□□□ -1.51
CDC42BPA-208ENST00000442054 ZC2HC1AQ96GY0 325 aa5.6□□□□□ -1.51
CDC42BPA-208ENST00000442054 MGST1P10620 155 aaKnown RBP5.59□□□□□ -1.51
CDC42BPA-208ENST00000442054 PMCHP20382 165 aa5.59□□□□□ -1.51
CDC42BPA-208ENST00000442054 HBBP68871 147 aa5.59□□□□□ -1.51
CDC42BPA-208ENST00000442054 PMCHL1Q16048 86 aa5.59□□□□□ -1.51
CDC42BPA-208ENST00000442054 SAMD10Q9BYL1 202 aa5.59□□□□□ -1.51
CDC42BPA-208ENST00000442054 SLC25A39Q9BZJ4 359 aaPredicted RBP5.59□□□□□ -1.51
CDC42BPA-208ENST00000442054 OTORQ9NRC9 128 aa5.59□□□□□ -1.51
CDC42BPA-208ENST00000442054 TRBV19A0A075B6N1 114 aa5.59□□□□□ -1.51
CDC42BPA-208ENST00000442054 PSG1P11464 419 aa5.59□□□□□ -1.51
CDC42BPA-208ENST00000442054 RPL7P18124 248 aaKnown RBP5.59□□□□□ -1.51
CDC42BPA-208ENST00000442054 KRTAP10-3P60369 221 aa5.59□□□□□ -1.51
CDC42BPA-208ENST00000442054 COL5A1-AS1Q5SY13 56 aa5.59□□□□□ -1.51
CDC42BPA-208ENST00000442054 C2orf91Q6ZV80 131 aa5.59□□□□□ -1.51
CDC42BPA-208ENST00000442054 BLNKQ8WV28 456 aa5.59□□□□□ -1.51
CDC42BPA-208ENST00000442054 RNF125Q96EQ8 232 aa5.59□□□□□ -1.51
CDC42BPA-208ENST00000442054 PGPA6NDG6 321 aa5.59□□□□□ -1.52
CDC42BPA-208ENST00000442054 LINC01545Q5VT33 79 aa5.59□□□□□ -1.52
CDC42BPA-208ENST00000442054 Q6ZVH6 145 aa5.59□□□□□ -1.52
CDC42BPA-208ENST00000442054 TMEM61Q8N0U2 210 aa5.59□□□□□ -1.52
CDC42BPA-208ENST00000442054 DEFB125Q8N687 156 aa5.59□□□□□ -1.52
CDC42BPA-208ENST00000442054 TXN2Q99757 166 aa5.59□□□□□ -1.52
CDC42BPA-208ENST00000442054 SHANK2-AS3Q9BTD1 123 aa5.59□□□□□ -1.52
CDC42BPA-208ENST00000442054 SYS1-DBNDD2H3BUS1 97 aa5.58□□□□□ -1.52
CDC42BPA-208ENST00000442054 UBE2G1P62253 170 aa5.58□□□□□ -1.52
CDC42BPA-208ENST00000442054 SPAG8Q99932 426 aaPredicted RBP5.58□□□□□ -1.52
CDC42BPA-208ENST00000442054 TRAV8-1A0A0A6YYK1 113 aa5.58□□□□□ -1.52
CDC42BPA-208ENST00000442054 FANCD2OSQ96PS1 177 aa5.58□□□□□ -1.52
CDC42BPA-208ENST00000442054 SPATA25Q9BR10 227 aa5.58□□□□□ -1.52
CDC42BPA-208ENST00000442054 COX11Q9Y6N1 276 aa5.58□□□□□ -1.52
CDC42BPA-208ENST00000442054 IGLV1-40P01703 118 aa5.58□□□□□ -1.52
CDC42BPA-208ENST00000442054 EGR2P11161 476 aaPredicted RBP5.58□□□□□ -1.52
CDC42BPA-208ENST00000442054 HIST1H1AQ02539 215 aaPredicted RBP5.58□□□□□ -1.52
CDC42BPA-208ENST00000442054 RRN3P1Q2M238 152 aa5.58□□□□□ -1.52
CDC42BPA-208ENST00000442054 GPHB5Q86YW7 130 aa5.58□□□□□ -1.52
CDC42BPA-208ENST00000442054 ATOH7Q8N100 152 aa5.58□□□□□ -1.52
CDC42BPA-208ENST00000442054 SGK494Q96LW2 274 aa5.58□□□□□ -1.52
CDC42BPA-208ENST00000442054 CHRDL1Q9BU40 450 aa5.58□□□□□ -1.52
CDC42BPA-208ENST00000442054 ZNF331Q9NQX6 463 aaPredicted RBP5.58□□□□□ -1.52
CDC42BPA-208ENST00000442054 IGLV11-55A0A075B6I3 123 aa5.57□□□□□ -1.52
CDC42BPA-208ENST00000442054 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.57□□□□□ -1.52
CDC42BPA-208ENST00000442054 ZFAND6Q6FIF0 208 aa5.57□□□□□ -1.52
CDC42BPA-208ENST00000442054 BPIFA4PQ86YQ2 179 aa5.57□□□□□ -1.52
CDC42BPA-208ENST00000442054 EXOC3-AS1Q8N2X6 119 aa5.57□□□□□ -1.52
CDC42BPA-208ENST00000442054 IL17DQ8TAD2 202 aa5.57□□□□□ -1.52
CDC42BPA-208ENST00000442054 SMPXQ9UHP9 88 aa5.57□□□□□ -1.52
CDC42BPA-208ENST00000442054 TAX1BP3O14907 124 aa5.57□□□□□ -1.52
CDC42BPA-208ENST00000442054 CD7P09564 240 aa5.57□□□□□ -1.52
CDC42BPA-208ENST00000442054 OR10J6PQ8NGY7 276 aa5.57□□□□□ -1.52
CDC42BPA-208ENST00000442054 IGHV7-4-1A0A0J9YVY3 117 aa5.57□□□□□ -1.52
CDC42BPA-208ENST00000442054 NCR2O95944 276 aa5.57□□□□□ -1.52
CDC42BPA-208ENST00000442054 LYPD1Q8N2G4 141 aa5.57□□□□□ -1.52
CDC42BPA-208ENST00000442054 ZNF502Q8TBZ5 544 aa5.57□□□□□ -1.52
CDC42BPA-208ENST00000442054 C1QTNF4Q9BXJ3 329 aa5.57□□□□□ -1.52
CDC42BPA-208ENST00000442054 ST20Q9HBF5 79 aa5.57□□□□□ -1.52
CDC42BPA-208ENST00000442054 SLC25A5P05141 298 aaKnown RBP5.56□□□□□ -1.52
CDC42BPA-208ENST00000442054 GLMPQ8WWB7 406 aa5.56□□□□□ -1.52
CDC42BPA-208ENST00000442054 FAM110AQ9BQ89 295 aa5.56□□□□□ -1.52
CDC42BPA-208ENST00000442054 TMEM70Q9BUB7 260 aa5.56□□□□□ -1.52
CDC42BPA-208ENST00000442054 CNFNQ9BYD5 112 aa5.56□□□□□ -1.52
CDC42BPA-208ENST00000442054 A8MWL6 223 aa5.56□□□□□ -1.52
CDC42BPA-208ENST00000442054 K7EQM0 130 aa5.56□□□□□ -1.52
CDC42BPA-208ENST00000442054 DEFB135Q30KP9 77 aa5.56□□□□□ -1.52
CDC42BPA-208ENST00000442054 APRG1Q8IVJ8 170 aa5.56□□□□□ -1.52
CDC42BPA-208ENST00000442054 WFDC9Q8NEX5 89 aa5.56□□□□□ -1.52
CDC42BPA-208ENST00000442054 H3BTX0 84 aa5.56□□□□□ -1.52
CDC42BPA-208ENST00000442054 M0R2Z0 102 aa5.56□□□□□ -1.52
CDC42BPA-208ENST00000442054 ARMS2P0C7Q2 107 aa5.56□□□□□ -1.52
CDC42BPA-208ENST00000442054 IGHV4-30-4P0DP06 118 aa5.56□□□□□ -1.52
CDC42BPA-208ENST00000442054 PSG3Q16557 428 aa5.56□□□□□ -1.52
CDC42BPA-208ENST00000442054 PGLYRP4Q96LB8 373 aa5.56□□□□□ -1.52
CDC42BPA-208ENST00000442054 DEFB114Q30KQ6 69 aa5.55□□□□□ -1.52
CDC42BPA-208ENST00000442054 BVES-AS1Q5T3Y7 98 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms