RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 CEBPGP53567 150 aa3.46□□□□□ -1.86
PTPN4-206ENST00000441089 ERCC8Q13216 396 aa3.46□□□□□ -1.86
PTPN4-206ENST00000441089 GUCA2BQ16661 112 aa3.46□□□□□ -1.86
PTPN4-206ENST00000441089 ZNF674Q2M3X9 581 aa3.46□□□□□ -1.86
PTPN4-206ENST00000441089 GDF5OSQ5U4N7 250 aa3.46□□□□□ -1.86
PTPN4-206ENST00000441089 LCN12Q6JVE5 192 aa3.46□□□□□ -1.86
PTPN4-206ENST00000441089 GOLT1AQ6ZVE7 132 aa3.46□□□□□ -1.86
PTPN4-206ENST00000441089 CMTM2Q8TAZ6 248 aa3.46□□□□□ -1.86
PTPN4-206ENST00000441089 MRPL53Q96EL3 112 aaKnown RBP3.46□□□□□ -1.86
PTPN4-206ENST00000441089 TVP23CQ96ET8 276 aa3.46□□□□□ -1.86
PTPN4-206ENST00000441089 VGLL1Q99990 258 aa3.46□□□□□ -1.86
PTPN4-206ENST00000441089 ATG101Q9BSB4 218 aa3.46□□□□□ -1.86
PTPN4-206ENST00000441089 NKX6-2Q9C056 277 aaPredicted RBP3.46□□□□□ -1.86
PTPN4-206ENST00000441089 CARHSP1Q9Y2V2 147 aaKnown RBP3.46□□□□□ -1.86
PTPN4-206ENST00000441089 DNAH5Q8TE73 4624 aa3.45□□□□□ -1.86
PTPN4-206ENST00000441089 TRAV25A0A0B4J276 109 aa3.45□□□□□ -1.86
PTPN4-206ENST00000441089 TRBV6-1A0A0K0K1D8 114 aa3.45□□□□□ -1.86
PTPN4-206ENST00000441089 ZNF727A8MUV8 499 aa3.45□□□□□ -1.86
PTPN4-206ENST00000441089 F8W036 122 aa3.45□□□□□ -1.86
PTPN4-206ENST00000441089 K7EN84 100 aa3.45□□□□□ -1.86
PTPN4-206ENST00000441089 DNASE2O00115 360 aaPredicted RBP3.45□□□□□ -1.86
PTPN4-206ENST00000441089 CD7P09564 240 aa3.45□□□□□ -1.86
PTPN4-206ENST00000441089 RPL35P42766 123 aaKnown RBP3.45□□□□□ -1.86
PTPN4-206ENST00000441089 DEFB131AP59861 70 aa3.45□□□□□ -1.86
PTPN4-206ENST00000441089 RPL23P62829 140 aaKnown RBP3.45□□□□□ -1.86
PTPN4-206ENST00000441089 TMEM183BQ1AE95 376 aa3.45□□□□□ -1.86
PTPN4-206ENST00000441089 ODF3L2Q3SX64 289 aa3.45□□□□□ -1.86
PTPN4-206ENST00000441089 CENPWQ5EE01 88 aa3.45□□□□□ -1.86
PTPN4-206ENST00000441089 PSMG4Q5JS54 123 aa3.45□□□□□ -1.86
PTPN4-206ENST00000441089 ATRAIDQ6UW56 229 aa3.45□□□□□ -1.86
PTPN4-206ENST00000441089 RBPMS2Q6ZRY4 209 aaKnown RBP3.45□□□□□ -1.86
PTPN4-206ENST00000441089 Q6ZWC4 215 aa3.45□□□□□ -1.86
PTPN4-206ENST00000441089 Q86TA4 180 aa3.45□□□□□ -1.86
PTPN4-206ENST00000441089 ARL6IP6Q8N6S5 226 aa3.45□□□□□ -1.86
PTPN4-206ENST00000441089 TMEM75Q8N9X5 138 aa3.45□□□□□ -1.86
PTPN4-206ENST00000441089 ZNF738Q8NE65 137 aa3.45□□□□□ -1.86
PTPN4-206ENST00000441089 OR2K2Q8NGT1 345 aa3.45□□□□□ -1.86
PTPN4-206ENST00000441089 Q8TAT8 98 aa3.45□□□□□ -1.86
PTPN4-206ENST00000441089 HIST1H2BAQ96A08 127 aa3.45□□□□□ -1.86
PTPN4-206ENST00000441089 SPAG8Q99932 426 aaPredicted RBP3.45□□□□□ -1.86
PTPN4-206ENST00000441089 OVOL2Q9BRP0 275 aa3.45□□□□□ -1.86
PTPN4-206ENST00000441089 TCEAL7Q9BRU2 100 aa3.45□□□□□ -1.86
PTPN4-206ENST00000441089 SEC11CQ9BY50 192 aa3.45□□□□□ -1.86
PTPN4-206ENST00000441089 AGPAT4-IT1Q9H0P7 198 aa3.45□□□□□ -1.86
PTPN4-206ENST00000441089 WFDC10AQ9H1F0 79 aa3.45□□□□□ -1.86
PTPN4-206ENST00000441089 AAMDCQ9H7C9 122 aa3.45□□□□□ -1.86
PTPN4-206ENST00000441089 MAP6D1Q9H9H5 199 aa3.45□□□□□ -1.86
PTPN4-206ENST00000441089 SDF2L1Q9HCN8 221 aa3.45□□□□□ -1.86
PTPN4-206ENST00000441089 PSG8Q9UQ74 426 aa3.45□□□□□ -1.86
PTPN4-206ENST00000441089 PRELID1Q9Y255 219 aa3.45□□□□□ -1.86
PTPN4-206ENST00000441089 KLF12Q9Y4X4 402 aa3.45□□□□□ -1.86
PTPN4-206ENST00000441089 A0A0J9YX75 114 aa3.44□□□□□ -1.86
PTPN4-206ENST00000441089 RBAKDNA6NC62 111 aa3.44□□□□□ -1.86
PTPN4-206ENST00000441089 KNCNA6PVL3 124 aa3.44□□□□□ -1.86
PTPN4-206ENST00000441089 A8MTW9 85 aa3.44□□□□□ -1.86
PTPN4-206ENST00000441089 KRBOX1C9JBD0 128 aa3.44□□□□□ -1.86
PTPN4-206ENST00000441089 C9JCJ5 164 aa3.44□□□□□ -1.86
PTPN4-206ENST00000441089 LTAP01374 205 aa3.44□□□□□ -1.86
PTPN4-206ENST00000441089 APOC3P02656 99 aa3.44□□□□□ -1.86
PTPN4-206ENST00000441089 CT45A10P0DMU9 189 aa3.44□□□□□ -1.86
PTPN4-206ENST00000441089 CSN1S1P47710 185 aa3.44□□□□□ -1.86
PTPN4-206ENST00000441089 CNN1P51911 297 aaKnown RBP3.44□□□□□ -1.86
PTPN4-206ENST00000441089 TAS2R60P59551 318 aa3.44□□□□□ -1.86
PTPN4-206ENST00000441089 PAFAH1B2P68402 229 aa3.44□□□□□ -1.86
PTPN4-206ENST00000441089 FLI1Q01543 452 aaPredicted RBP3.44□□□□□ -1.86
PTPN4-206ENST00000441089 HIST1H1AQ02539 215 aaPredicted RBP3.44□□□□□ -1.86
PTPN4-206ENST00000441089 LGALS9BQ3B8N2 356 aa3.44□□□□□ -1.86
PTPN4-206ENST00000441089 PRR9Q5T870 116 aa3.44□□□□□ -1.86
PTPN4-206ENST00000441089 Q6ZQT7 251 aa3.44□□□□□ -1.86
PTPN4-206ENST00000441089 PRNTQ86SH4 94 aa3.44□□□□□ -1.86
PTPN4-206ENST00000441089 LINC01551Q86U37 167 aa3.44□□□□□ -1.86
PTPN4-206ENST00000441089 BAGE2Q86Y30 109 aa3.44□□□□□ -1.86
PTPN4-206ENST00000441089 APRG1Q8IVJ8 170 aa3.44□□□□□ -1.86
PTPN4-206ENST00000441089 NHLRC2Q8NBF2 726 aa3.44□□□□□ -1.86
PTPN4-206ENST00000441089 OR8A1Q8NGG7 326 aa3.44□□□□□ -1.86
PTPN4-206ENST00000441089 OCC1Q8TAD7 63 aa3.44□□□□□ -1.86
PTPN4-206ENST00000441089 DAZAP1Q96EP5 407 aaKnown RBP3.44□□□□□ -1.86
PTPN4-206ENST00000441089 FMC1Q96HJ9 113 aa3.44□□□□□ -1.86
PTPN4-206ENST00000441089 FAM19A4Q96LR4 140 aa3.44□□□□□ -1.86
PTPN4-206ENST00000441089 SMIM7Q9BQ49 75 aa3.44□□□□□ -1.86
PTPN4-206ENST00000441089 SRD5A3Q9H8P0 318 aa3.44□□□□□ -1.86
PTPN4-206ENST00000441089 CLEC5AQ9NY25 188 aa3.44□□□□□ -1.86
PTPN4-206ENST00000441089 TP53TG1Q9Y2A0 90 aa3.44□□□□□ -1.86
PTPN4-206ENST00000441089 HMCN2Q8NDA2 5059 aa3.44□□□□□ -1.86
PTPN4-206ENST00000441089 RNF213Q63HN8 5207 aa3.43□□□□□ -1.86
PTPN4-206ENST00000441089 A0A087WWL8 130 aa3.43□□□□□ -1.86
PTPN4-206ENST00000441089 SERTM2A0A1B0GWG4 89 aa3.43□□□□□ -1.86
PTPN4-206ENST00000441089 OR4C46A6NHA9 309 aa3.43□□□□□ -1.86
PTPN4-206ENST00000441089 H3BMM0 161 aa3.43□□□□□ -1.86
PTPN4-206ENST00000441089 SCO1O75880 301 aa3.43□□□□□ -1.86
PTPN4-206ENST00000441089 GCGP01275 180 aa3.43□□□□□ -1.86
PTPN4-206ENST00000441089 S100A1P23297 94 aa3.43□□□□□ -1.86
PTPN4-206ENST00000441089 ID1P41134 155 aa3.43□□□□□ -1.86
PTPN4-206ENST00000441089 CRIP1P50238 77 aa3.43□□□□□ -1.86
PTPN4-206ENST00000441089 ZNF80P51504 273 aaPredicted RBP3.43□□□□□ -1.86
PTPN4-206ENST00000441089 ZNF138P52744 262 aa3.43□□□□□ -1.86
PTPN4-206ENST00000441089 UBE2G1P62253 170 aa3.43□□□□□ -1.86
PTPN4-206ENST00000441089 SNRPD3P62318 126 aaKnown RBP3.43□□□□□ -1.86
PTPN4-206ENST00000441089 OR5I1Q13606 314 aa3.43□□□□□ -1.86
PTPN4-206ENST00000441089 TMEM241Q24JQ0 296 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms