RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 GPX1P07203 203 aa12.65□□□□□ -0.38
CCDC188-201ENST00000439765 ADCYAP1P18509 176 aa12.65□□□□□ -0.38
CCDC188-201ENST00000439765 TMEM241Q24JQ0 296 aa12.65□□□□□ -0.38
CCDC188-201ENST00000439765 TMEM256Q8N2U0 113 aa12.65□□□□□ -0.38
CCDC188-201ENST00000439765 OCC1Q8TAD7 63 aa12.65□□□□□ -0.38
CCDC188-201ENST00000439765 SEC11CQ9BY50 192 aa12.65□□□□□ -0.38
CCDC188-201ENST00000439765 LY96Q9Y6Y9 160 aa12.65□□□□□ -0.38
CCDC188-201ENST00000439765 TRAV12-3A0A0B4J271 114 aa12.65□□□□□ -0.38
CCDC188-201ENST00000439765 SMUG1Q53HV7 270 aa12.65□□□□□ -0.38
CCDC188-201ENST00000439765 NAT8Q9UHE5 227 aa12.65□□□□□ -0.38
CCDC188-201ENST00000439765 C10orf91Q5T1B1 145 aa12.64□□□□□ -0.39
CCDC188-201ENST00000439765 PRR9Q5T870 116 aa12.64□□□□□ -0.39
CCDC188-201ENST00000439765 FAM222AQ5U5X8 452 aa12.64□□□□□ -0.39
CCDC188-201ENST00000439765 ZC2HC1AQ96GY0 325 aa12.64□□□□□ -0.39
CCDC188-201ENST00000439765 NIPSNAP3BQ9BS92 247 aa12.64□□□□□ -0.39
CCDC188-201ENST00000439765 KLK5Q9Y337 293 aaPredicted RBP12.64□□□□□ -0.39
CCDC188-201ENST00000439765 H7BYZ3 331 aa12.63□□□□□ -0.39
CCDC188-201ENST00000439765 GCGP01275 180 aa12.63□□□□□ -0.39
CCDC188-201ENST00000439765 SPART-AS1P0CW21 52 aa12.63□□□□□ -0.39
CCDC188-201ENST00000439765 MGST1P10620 155 aaKnown RBP12.63□□□□□ -0.39
CCDC188-201ENST00000439765 AZU1P20160 251 aa12.63□□□□□ -0.39
CCDC188-201ENST00000439765 RNASE4P34096 147 aaKnown RBP12.63□□□□□ -0.39
CCDC188-201ENST00000439765 BTN1A1Q13410 526 aa12.63□□□□□ -0.39
CCDC188-201ENST00000439765 C12orf74Q32Q52 190 aa12.63□□□□□ -0.39
CCDC188-201ENST00000439765 C20orf144Q9BQM9 153 aa12.63□□□□□ -0.39
CCDC188-201ENST00000439765 SDF2L1Q9HCN8 221 aa12.63□□□□□ -0.39
CCDC188-201ENST00000439765 DKK2Q9UBU2 259 aa12.63□□□□□ -0.39
CCDC188-201ENST00000439765 K7EN84 100 aa12.62□□□□□ -0.39
CCDC188-201ENST00000439765 CRIP1P50238 77 aa12.62□□□□□ -0.39
CCDC188-201ENST00000439765 ZNF80P51504 273 aaPredicted RBP12.62□□□□□ -0.39
CCDC188-201ENST00000439765 RPL23P62829 140 aaKnown RBP12.62□□□□□ -0.39
CCDC188-201ENST00000439765 LINC01551Q86U37 167 aa12.62□□□□□ -0.39
CCDC188-201ENST00000439765 C7orf71A4D174 169 aa12.61□□□□□ -0.39
CCDC188-201ENST00000439765 KRBOX1C9JBD0 128 aa12.61□□□□□ -0.39
CCDC188-201ENST00000439765 Q6AWC8 147 aa12.61□□□□□ -0.39
CCDC188-201ENST00000439765 BIN3Q9NQY0 253 aa12.61□□□□□ -0.39
CCDC188-201ENST00000439765 PLAC8L1A1L4L8 177 aa12.6□□□□□ -0.39
CCDC188-201ENST00000439765 LY6G6CO95867 125 aa12.6□□□□□ -0.39
CCDC188-201ENST00000439765 OR5I1Q13606 314 aa12.6□□□□□ -0.39
CCDC188-201ENST00000439765 C16orf74Q96GX8 76 aa12.6□□□□□ -0.39
CCDC188-201ENST00000439765 CARHSP1Q9Y2V2 147 aaKnown RBP12.6□□□□□ -0.39
CCDC188-201ENST00000439765 TRAV10A0A0B4J240 114 aa12.59□□□□□ -0.39
CCDC188-201ENST00000439765 TEX48A0A1B0GUV7 120 aa12.59□□□□□ -0.39
CCDC188-201ENST00000439765 FABP5P3A8MUU1 101 aa12.59□□□□□ -0.39
CCDC188-201ENST00000439765 ZNF324O75467 553 aaPredicted RBP12.59□□□□□ -0.39
CCDC188-201ENST00000439765 PFN1P07737 140 aaKnown RBP12.59□□□□□ -0.39
CCDC188-201ENST00000439765 PRR27Q6MZM9 219 aa12.59□□□□□ -0.39
CCDC188-201ENST00000439765 Q6ZQT7 251 aa12.59□□□□□ -0.39
CCDC188-201ENST00000439765 RNASE8Q8TDE3 154 aaKnown RBP12.59□□□□□ -0.39
CCDC188-201ENST00000439765 TMEM263Q8WUH6 116 aaKnown RBP12.59□□□□□ -0.39
CCDC188-201ENST00000439765 TRAV21A0A0B4J279 112 aa12.59□□□□□ -0.39
CCDC188-201ENST00000439765 PNRC1Q12796 327 aaPredicted RBP12.59□□□□□ -0.39
CCDC188-201ENST00000439765 ADIRFQ15847 76 aa12.59□□□□□ -0.39
CCDC188-201ENST00000439765 FAM162BQ5T6X4 162 aa12.59□□□□□ -0.39
CCDC188-201ENST00000439765 SH2D1AO60880 128 aa12.58□□□□□ -0.4
CCDC188-201ENST00000439765 PYGO2Q9BRQ0 406 aa12.58□□□□□ -0.4
CCDC188-201ENST00000439765 DEFB131BA0A096LNP1 70 aa12.57□□□□□ -0.4
CCDC188-201ENST00000439765 C19orf71A6NCJ1 209 aa12.57□□□□□ -0.4
CCDC188-201ENST00000439765 IGLL5B9A064 214 aa12.57□□□□□ -0.4
CCDC188-201ENST00000439765 DAD1P61803 113 aa12.57□□□□□ -0.4
CCDC188-201ENST00000439765 ISOC2Q96AB3 205 aa12.57□□□□□ -0.4
CCDC188-201ENST00000439765 DAZAP1Q96EP5 407 aaKnown RBP12.57□□□□□ -0.4
CCDC188-201ENST00000439765 KMT2AQ03164 3969 aa12.57□□□□□ -0.4
CCDC188-201ENST00000439765 DEFB130BP0DP73 79 aa12.56□□□□□ -0.4
CCDC188-201ENST00000439765 DEFB130AP0DP74 79 aa12.56□□□□□ -0.4
CCDC188-201ENST00000439765 HTN3P15516 51 aa12.56□□□□□ -0.4
CCDC188-201ENST00000439765 NUDT10Q8NFP7 164 aa12.56□□□□□ -0.4
CCDC188-201ENST00000439765 NUDT11Q96G61 164 aa12.56□□□□□ -0.4
CCDC188-201ENST00000439765 LYRM9A8MSI8 78 aa12.55□□□□□ -0.4
CCDC188-201ENST00000439765 APOC3P02656 99 aa12.55□□□□□ -0.4
CCDC188-201ENST00000439765 ZNF493Q6ZR52 646 aa12.55□□□□□ -0.4
CCDC188-201ENST00000439765 FAM231DQ6ZW35 169 aa12.55□□□□□ -0.4
CCDC188-201ENST00000439765 RNASE7Q9H1E1 156 aaKnown RBP12.55□□□□□ -0.4
CCDC188-201ENST00000439765 NOP10Q9NPE3 64 aaKnown RBP12.55□□□□□ -0.4
CCDC188-201ENST00000439765 C11orf21Q9P2W6 132 aa12.55□□□□□ -0.4
CCDC188-201ENST00000439765 TIMM8BQ9Y5J9 83 aaPredicted RBP12.55□□□□□ -0.4
CCDC188-201ENST00000439765 CBY3A6NI87 242 aa12.54□□□□□ -0.4
CCDC188-201ENST00000439765 ERVFC1-1P60608 527 aa12.54□□□□□ -0.4
CCDC188-201ENST00000439765 IBA57Q5T440 356 aaKnown RBP12.54□□□□□ -0.4
CCDC188-201ENST00000439765 LGALS9CQ6DKI2 356 aa12.54□□□□□ -0.4
CCDC188-201ENST00000439765 OSTCQ9NRP0 149 aa12.54□□□□□ -0.4
CCDC188-201ENST00000439765 M0R036 132 aa12.53□□□□□ -0.4
CCDC188-201ENST00000439765 P01737 135 aa12.53□□□□□ -0.4
CCDC188-201ENST00000439765 ORM1P02763 201 aa12.53□□□□□ -0.4
CCDC188-201ENST00000439765 MUC21Q5SSG8 566 aa12.53□□□□□ -0.4
CCDC188-201ENST00000439765 SFRP2Q96HF1 295 aa12.53□□□□□ -0.4
CCDC188-201ENST00000439765 IGHV4-4A0A075B6R2 117 aa12.53□□□□□ -0.4
CCDC188-201ENST00000439765 IGHV1OR15-1A0A075B7D0 117 aa12.53□□□□□ -0.4
CCDC188-201ENST00000439765 IGKV3D-20A0A0C4DH25 116 aa12.53□□□□□ -0.4
CCDC188-201ENST00000439765 SNURFLB1AK76 121 aa12.53□□□□□ -0.4
CCDC188-201ENST00000439765 TCTAP57738 103 aa12.53□□□□□ -0.4
CCDC188-201ENST00000439765 ANXA2RQ3ZCQ2 193 aa12.53□□□□□ -0.4
CCDC188-201ENST00000439765 LINC01559Q495D7 138 aa12.53□□□□□ -0.4
CCDC188-201ENST00000439765 FAM159AQ6UWV7 190 aa12.53□□□□□ -0.4
CCDC188-201ENST00000439765 LINC00467Q9BRT7 94 aa12.53□□□□□ -0.4
CCDC188-201ENST00000439765 NAGKQ9UJ70 344 aa12.53□□□□□ -0.4
CCDC188-201ENST00000439765 TP53TG3Q9ULZ0 132 aa12.53□□□□□ -0.4
CCDC188-201ENST00000439765 B4DEV8 164 aa12.52□□□□□ -0.41
CCDC188-201ENST00000439765 GATCO43716 136 aaKnown RBP12.52□□□□□ -0.41
CCDC188-201ENST00000439765 TDRG1Q3Y452 100 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms