RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 NDPQ00604 133 aa6.72□□□□□ -1.33
GABPB1-205ENST00000429662 C2orf91Q6ZV80 131 aa6.72□□□□□ -1.33
GABPB1-205ENST00000429662 GTF2H5Q6ZYL4 71 aa6.72□□□□□ -1.33
GABPB1-205ENST00000429662 SIRPDQ9H106 197 aa6.72□□□□□ -1.33
GABPB1-205ENST00000429662 TIMM8BQ9Y5J9 83 aaPredicted RBP6.72□□□□□ -1.33
GABPB1-205ENST00000429662 LENEPQ9Y5L5 61 aa6.72□□□□□ -1.33
GABPB1-205ENST00000429662 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.72□□□□□ -1.337e-11■■■■■ 55.5
GABPB1-205ENST00000429662 NDUFS7O75251 213 aa6.71□□□□□ -1.33
GABPB1-205ENST00000429662 NCR2O95944 276 aa6.71□□□□□ -1.33
GABPB1-205ENST00000429662 IGHG4P01861 327 aa6.71□□□□□ -1.33
GABPB1-205ENST00000429662 FGF6P10767 208 aa6.71□□□□□ -1.33
GABPB1-205ENST00000429662 HLA-DRB4P13762 266 aa6.71□□□□□ -1.33
GABPB1-205ENST00000429662 PRR31Q5SQ13 230 aa6.71□□□□□ -1.33
GABPB1-205ENST00000429662 RNF185Q96GF1 192 aa6.71□□□□□ -1.33
GABPB1-205ENST00000429662 METTL26Q96S19 204 aa6.71□□□□□ -1.33
GABPB1-205ENST00000429662 VGLL1Q99990 258 aa6.71□□□□□ -1.33
GABPB1-205ENST00000429662 S4R3C0 116 aa6.71□□□□□ -1.33
GABPB1-205ENST00000429662 HLA-DRB4X5D2U9 266 aa6.71□□□□□ -1.33
GABPB1-205ENST00000429662 ABCA1O95477 2261 aa6.71□□□□□ -1.34
GABPB1-205ENST00000429662 NOTCH1P46531 2555 aa6.71□□□□□ -1.34
GABPB1-205ENST00000429662 ARFGEF3Q5TH69 2177 aa6.71□□□□□ -1.34
GABPB1-205ENST00000429662 MALRD1Q5VYJ5 2156 aa6.71□□□□□ -1.34
GABPB1-205ENST00000429662 IGHV4-4A0A075B6R2 117 aa6.7□□□□□ -1.34
GABPB1-205ENST00000429662 NPYP01303 97 aa6.7□□□□□ -1.34
GABPB1-205ENST00000429662 ZNF80P51504 273 aaPredicted RBP6.7□□□□□ -1.34
GABPB1-205ENST00000429662 C15orf32Q32M92 178 aa6.7□□□□□ -1.34
GABPB1-205ENST00000429662 TMEM78Q5T7P6 136 aa6.7□□□□□ -1.34
GABPB1-205ENST00000429662 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.7□□□□□ -1.34
GABPB1-205ENST00000429662 BCL6BQ8N143 479 aaPredicted RBP6.7□□□□□ -1.34
GABPB1-205ENST00000429662 Q8N8P6 123 aa6.7□□□□□ -1.34
GABPB1-205ENST00000429662 ZMAT4Q9H898 229 aa6.7□□□□□ -1.34
GABPB1-205ENST00000429662 HIGD1BQ9P298 99 aa6.7□□□□□ -1.34
GABPB1-205ENST00000429662 C7orf71A4D174 169 aa6.69□□□□□ -1.34
GABPB1-205ENST00000429662 C9orf118A6NHY6 69 aa6.69□□□□□ -1.34
GABPB1-205ENST00000429662 CBY3A6NI87 242 aa6.69□□□□□ -1.34
GABPB1-205ENST00000429662 FAM223BA6NKX1 122 aa6.69□□□□□ -1.34
GABPB1-205ENST00000429662 TNFRSF6BO95407 300 aa6.69□□□□□ -1.34
GABPB1-205ENST00000429662 CLEC3BP05452 202 aa6.69□□□□□ -1.34
GABPB1-205ENST00000429662 EFNA4P52798 201 aa6.69□□□□□ -1.34
GABPB1-205ENST00000429662 RBX1P62877 108 aa6.69□□□□□ -1.34
GABPB1-205ENST00000429662 LOXL1Q08397 574 aaPredicted RBP6.69□□□□□ -1.34
GABPB1-205ENST00000429662 KIR3DS1Q14943 382 aa6.69□□□□□ -1.34
GABPB1-205ENST00000429662 ANKRD39Q53RE8 183 aa6.69□□□□□ -1.34
GABPB1-205ENST00000429662 AMMECR1LQ6DCA0 310 aa6.69□□□□□ -1.34
GABPB1-205ENST00000429662 C9orf47Q6ZRZ4 202 aa6.69□□□□□ -1.34
GABPB1-205ENST00000429662 FAM223AQ8IWN6 122 aa6.69□□□□□ -1.34
GABPB1-205ENST00000429662 DYNAPQ8N1N2 210 aa6.69□□□□□ -1.34
GABPB1-205ENST00000429662 WFDC12Q8WWY7 111 aa6.69□□□□□ -1.34
GABPB1-205ENST00000429662 U3KQE9 123 aa6.69□□□□□ -1.34
GABPB1-205ENST00000429662 GAGE10A6NGK3 116 aa6.69□□□□□ -1.34
GABPB1-205ENST00000429662 K7EMI3 77 aa6.69□□□□□ -1.34
GABPB1-205ENST00000429662 K7ERU9 68 aa6.69□□□□□ -1.34
GABPB1-205ENST00000429662 BRI3O95415 125 aa6.69□□□□□ -1.34
GABPB1-205ENST00000429662 IGHV3-23P01764 117 aa6.69□□□□□ -1.34
GABPB1-205ENST00000429662 EVI2AP22794 236 aa6.69□□□□□ -1.34
GABPB1-205ENST00000429662 LEPP41159 167 aa6.69□□□□□ -1.34
GABPB1-205ENST00000429662 CRIP2P52943 208 aaPredicted RBP6.69□□□□□ -1.34
GABPB1-205ENST00000429662 ATP5G2Q06055 141 aa6.69□□□□□ -1.34
GABPB1-205ENST00000429662 FAM106AQ4KMX7 169 aa6.69□□□□□ -1.34
GABPB1-205ENST00000429662 Q6ZVH6 145 aa6.69□□□□□ -1.34
GABPB1-205ENST00000429662 IL17RELQ6ZVW7 336 aa6.69□□□□□ -1.34
GABPB1-205ENST00000429662 Q8TAT8 98 aa6.69□□□□□ -1.34
GABPB1-205ENST00000429662 RNASE8Q8TDE3 154 aaKnown RBP6.69□□□□□ -1.34
GABPB1-205ENST00000429662 MRAP2Q96G30 205 aa6.69□□□□□ -1.34
GABPB1-205ENST00000429662 MCRIP2Q9BUT9 160 aaKnown RBP6.69□□□□□ -1.34
GABPB1-205ENST00000429662 CENPVL3A0A0U1RRI6 287 aa6.68□□□□□ -1.34
GABPB1-205ENST00000429662 ATP6V0E1O15342 81 aa6.68□□□□□ -1.34
GABPB1-205ENST00000429662 SNAI2O43623 268 aa6.68□□□□□ -1.34
GABPB1-205ENST00000429662 LY6HO94772 140 aa6.68□□□□□ -1.34
GABPB1-205ENST00000429662 ZFP36P26651 326 aaKnown RBP6.68□□□□□ -1.34
GABPB1-205ENST00000429662 PCP4P48539 62 aa6.68□□□□□ -1.34
GABPB1-205ENST00000429662 ECSCRQ19T08 205 aa6.68□□□□□ -1.34
GABPB1-205ENST00000429662 KRTAP24-1Q3LI83 254 aa6.68□□□□□ -1.34
GABPB1-205ENST00000429662 PRSS57Q6UWY2 283 aa6.68□□□□□ -1.34
GABPB1-205ENST00000429662 ADAMTSL5Q6ZMM2 481 aa6.68□□□□□ -1.34
GABPB1-205ENST00000429662 C9orf139Q6ZV77 190 aa6.68□□□□□ -1.34
GABPB1-205ENST00000429662 ZNF575Q86XF7 245 aa6.68□□□□□ -1.34
GABPB1-205ENST00000429662 OR5A1Q8NGJ0 315 aa6.68□□□□□ -1.34
GABPB1-205ENST00000429662 OR2K2Q8NGT1 345 aa6.68□□□□□ -1.34
GABPB1-205ENST00000429662 MYOZ3Q8TDC0 251 aa6.68□□□□□ -1.34
GABPB1-205ENST00000429662 LINC00477Q96M19 166 aa6.68□□□□□ -1.34
GABPB1-205ENST00000429662 CST9LQ9H4G1 147 aa6.68□□□□□ -1.34
GABPB1-205ENST00000429662 TRBV7-9A0A0J9YWB2 115 aa6.67□□□□□ -1.34
GABPB1-205ENST00000429662 CLPSL1A2RUU4 121 aa6.67□□□□□ -1.34
GABPB1-205ENST00000429662 SMKR1H3BMG3 65 aa6.67□□□□□ -1.34
GABPB1-205ENST00000429662 H3BUA1 57 aa6.67□□□□□ -1.34
GABPB1-205ENST00000429662 OVOL1O14753 267 aa6.67□□□□□ -1.34
GABPB1-205ENST00000429662 NPFFO15130 113 aa6.67□□□□□ -1.34
GABPB1-205ENST00000429662 DPM2O94777 84 aa6.67□□□□□ -1.34
GABPB1-205ENST00000429662 PPP1R17O96001 155 aa6.67□□□□□ -1.34
GABPB1-205ENST00000429662 IGKCP01834 107 aa6.67□□□□□ -1.34
GABPB1-205ENST00000429662 PRSS1P07477 247 aa6.67□□□□□ -1.34
GABPB1-205ENST00000429662 MED14OSP0DP75 135 aa6.67□□□□□ -1.34
GABPB1-205ENST00000429662 ERCC8Q13216 396 aa6.67□□□□□ -1.34
GABPB1-205ENST00000429662 LAGE3Q14657 143 aa6.67□□□□□ -1.34
GABPB1-205ENST00000429662 ODF1Q14990 250 aa6.67□□□□□ -1.34
GABPB1-205ENST00000429662 TAL2Q16559 108 aa6.67□□□□□ -1.34
GABPB1-205ENST00000429662 OCIAD2Q56VL3 154 aa6.67□□□□□ -1.34
GABPB1-205ENST00000429662 Q5PR19 223 aa6.67□□□□□ -1.34
GABPB1-205ENST00000429662 CLEC19AQ6UXS0 136 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms